Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 7.3e-60 235.7 136 100.0
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 3.0e-37 160.6 113 85.8
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 1.5e-28 131.7 111 67.6
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 7.4e-20 102.8 101 64.4
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 1.6e-19 101.7 101 65.3
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 1.6e-19 101.7 72 65.3
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 3.7e-19 100.5 125 42.4
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 1.4e-18 98.6 117 59.8
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 5.3e-18 96.7 119 57.1
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 9.0e-18 95.9 119 57.1
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 3.4e-17 94.0 115 43.5
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 4.5e-17 93.6 104 62.5
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 7.7e-17 92.8 101 59.4
Atru.chr12.1659 Acer truncatum HOM05D007763 ORTHO05D009537 2.9e-16 90.9 106 60.4
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 3.8e-16 90.5 103 48.5
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 5.0e-16 90.1 108 59.3
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 1.4e-15 88.6 102 60.8
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 1.9e-15 88.2 71 54.9
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 3.2e-15 87.4 77 55.8
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 5.5e-15 86.7 74 54.1
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 9.4e-15 85.9 99 43.4
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 1.8e-13 81.6 70 51.4
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 2.3e-13 81.3 109 54.1
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 3.9e-13 80.5 128 32.8
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 5.1e-13 80.1 101 59.4
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 6.7e-13 79.7 99 41.4
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 8.8e-13 79.3 69 50.7
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 1.1e-12 79.0 80 46.2
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 1.5e-12 78.6 99 41.4
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 2.0e-12 78.2 115 36.5
Medtr3g037490 Medicago truncatula HOM05D007763 ORTHO05D009537 5.7e-12 76.6 63 55.6
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 9.7e-12 75.9 89 52.8
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 1.7e-11 75.1 72 47.2
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 3.7e-11 73.9 91 38.5
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 3.7e-11 73.9 92 37.0
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 4.8e-11 73.6 108 37.0
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.1e-10 72.4 91 37.4
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 1.4e-10 72.0 122 36.1
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 1.8e-10 71.6 77 40.3
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 4.1e-10 70.5 58 55.2
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 6.9e-10 69.7 61 49.2
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 6.9e-10 69.7 76 39.5
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 9.1e-10 69.3 136 43.4
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 1.2e-09 68.9 93 58.1
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 1.5e-09 68.6 88 37.5
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 7.7e-09 66.2 103 55.3
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 6.5e-08 63.2 71 40.8
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 1.4e-07 62.0 66 42.4
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 1.9e-07 61.6 61 47.5
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 4.2e-07 60.5 64 42.2
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 5.5e-07 60.1 66 40.9
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 9.4e-07 59.3 66 42.4
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 9.4e-07 59.3 62 43.5
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 9.4e-07 59.3 66 42.4
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 9.4e-07 59.3 66 42.4
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 6.1e-06 56.6 66 39.4


User provided reference genes

Program Settings