Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.6e-126 456.4 286 100.0
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 6.4e-88 328.2 290 69.3
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 9.9e-81 304.3 291 71.5
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.2e-56 223.4 275 48.4
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.9e-55 220.3 274 47.4
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 7.2e-55 218.4 258 49.6
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.0e-53 214.5 256 50.0
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.0e-53 214.5 276 46.4
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 1.8e-53 213.8 279 45.9
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 3.9e-53 212.6 279 45.9
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.5e-52 209.9 275 46.9
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 2.5e-52 209.9 261 45.2
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 2.5e-52 209.9 273 49.8
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 3.7e-51 206.1 270 47.4
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 8.2e-51 204.9 285 47.0
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 4.1e-50 202.6 252 50.0
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 5.3e-50 202.2 277 44.4
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 2.6e-49 199.9 276 44.2
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.2e-48 196.8 283 45.2
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.8e-48 196.1 263 44.9
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 3.8e-48 196.1 247 47.8
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 6.5e-48 195.3 267 43.8
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 6.5e-48 195.3 279 48.4
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 8.5e-48 194.9 257 46.7
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.4e-47 194.1 277 45.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 2.5e-47 193.4 277 45.1
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 4.2e-47 192.6 276 45.3
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.2e-47 192.6 279 45.9
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 5.5e-47 192.2 280 45.4
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 7.2e-47 191.8 265 44.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 7.2e-47 191.8 288 42.7
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 1.2e-46 191.0 276 43.1
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.6e-46 190.7 280 46.8
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 2.1e-46 190.3 280 46.8
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 2.7e-46 189.9 258 43.8
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 2.7e-46 189.9 278 47.1
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.6e-46 189.5 280 46.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.6e-46 189.5 280 46.4
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 4.6e-46 189.1 277 42.2
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 7.9e-46 188.3 278 42.1
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 7.9e-46 188.3 274 43.8
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 7.9e-46 188.3 246 48.0
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.0e-45 188.0 279 43.4
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.8e-45 187.2 278 43.5
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.8e-45 187.2 271 47.2
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 2.3e-45 186.8 282 43.3
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 3.9e-45 186.0 257 44.7
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 2.0e-44 183.7 272 41.5
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 2.0e-44 183.7 249 46.6
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 3.3e-44 183.0 286 40.9
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 5.7e-44 182.2 261 43.7
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 5.7e-44 182.2 266 45.1
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 7.4e-44 181.8 274 42.0
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.2e-43 180.3 253 44.7
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.2e-43 180.3 284 40.5
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.7e-43 179.5 256 41.8
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 4.8e-43 179.1 283 47.3
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.1e-42 177.9 282 39.4
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.1e-42 177.9 280 46.8
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.4e-42 177.6 275 44.0
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 3.1e-42 176.4 293 38.9
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 3.1e-42 176.4 273 42.9
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.1e-42 176.4 256 41.4
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 5.3e-42 175.6 244 40.2
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 2.6e-41 173.3 302 41.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.5e-41 172.6 262 40.5
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 4.5e-41 172.6 275 41.8
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 7.7e-41 171.8 277 41.9
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.3e-40 171.0 251 40.6
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.2e-40 170.2 284 40.1
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.9e-40 169.9 281 45.6
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 8.5e-40 168.3 276 39.5
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.4e-39 167.5 253 42.3
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.6e-38 164.1 273 42.5
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 2.7e-38 163.3 276 43.5
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 3.6e-38 162.9 250 42.0
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 4.7e-38 162.5 283 40.3
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 6.1e-38 162.2 287 39.7
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 7.9e-38 161.8 266 38.7
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.4e-37 161.0 237 43.5
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.4e-37 161.0 278 39.9
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.0e-37 159.8 277 37.5
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 3.9e-37 159.5 238 42.9
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 3.9e-37 159.5 280 40.0
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 6.7e-37 158.7 119 65.5
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 8.8e-37 158.3 238 42.9
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 8.8e-37 158.3 277 39.7
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.1e-36 157.9 226 41.6
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 2.6e-36 156.8 279 39.1
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.6e-36 156.8 240 39.6
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.4e-36 156.0 271 39.1
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 5.7e-36 155.6 277 39.4
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.4e-34 151.0 272 39.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 1.8e-34 150.6 249 40.6
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 2.4e-34 150.2 279 38.4
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 2.4e-34 150.2 282 35.5
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 3.1e-34 149.8 280 38.2
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 4.1e-34 149.4 256 39.8
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 4.1e-34 149.4 248 38.7
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 7.0e-34 148.7 279 38.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 7.0e-34 148.7 279 38.0
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 7.0e-34 148.7 251 36.3
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.2e-33 147.9 279 38.0
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.0e-33 147.1 249 37.8
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 7.7e-33 145.2 281 35.6
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.3e-32 144.4 259 37.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 5.0e-32 142.5 236 40.7
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 5.0e-32 142.5 289 36.3
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 5.0e-32 142.5 289 36.3
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 2.8e-27 126.7 220 35.9
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 4.8e-27 125.9 280 33.6
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 3.1e-26 123.2 258 34.1
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 3.1e-26 123.2 124 50.0
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 4.1e-26 122.9 122 50.8
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-25 121.3 281 35.9
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 2.0e-25 120.6 211 37.0
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 2.0e-25 120.6 240 37.5
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 2.0e-25 120.6 125 48.8
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 2.7e-25 120.2 125 47.2
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 3.5e-25 119.8 112 53.6
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 7.7e-25 118.6 274 34.7
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 1.5e-20 104.4 198 38.4
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.4e-18 97.8 265 29.8
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.3e-16 91.3 74 64.9
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 2.3e-13 80.5 199 37.7
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.2e-09 68.2 262 30.2
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 5.0e-08 62.8 66 51.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.1e-06 57.4 54 46.3
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 2.1e-06 57.4 56 50.0


User provided reference genes

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