Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 7.0e-164 580.5 279 100.0
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.8e-148 529.3 277 91.0
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 6.2e-136 487.6 278 86.0
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.2e-126 456.8 277 76.5
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.2e-125 452.6 294 73.1
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 2.9e-125 452.2 277 74.0
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 2.4e-124 449.1 279 75.3
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 9.2e-124 447.2 277 75.5
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 3.9e-122 441.8 277 73.3
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 5.1e-122 441.4 277 74.7
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.1e-119 433.7 277 71.1
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.4e-119 433.3 277 72.9
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.8e-119 433.0 277 71.1
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 2.4e-119 432.6 276 72.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 3.1e-119 432.2 277 72.9
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 8.9e-119 430.6 277 72.2
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.2e-118 430.3 276 71.7
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.5e-118 429.9 277 71.1
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.5e-118 429.9 277 70.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 2.6e-118 429.1 277 71.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 3.4e-118 428.7 277 71.8
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 4.4e-118 428.3 277 71.5
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 5.8e-118 427.9 277 70.8
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 5.8e-118 427.9 277 71.5
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 9.9e-118 427.2 277 69.3
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 9.9e-118 427.2 277 70.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.7e-117 426.4 277 70.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.7e-117 426.4 276 71.0
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.7e-117 426.4 277 70.0
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.9e-117 425.6 266 71.8
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 8.4e-117 424.1 271 72.3
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.4e-116 423.3 271 73.1
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.4e-116 423.3 277 70.4
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.9e-116 422.9 278 70.5
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 2.4e-116 422.5 276 70.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.4e-116 422.5 275 70.9
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 3.2e-116 422.2 271 72.7
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 3.2e-116 422.2 271 72.7
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 4.2e-116 421.8 276 70.3
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 7.1e-116 421.0 276 70.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.1e-116 421.0 269 71.4
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 9.3e-116 420.6 263 71.9
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 9.3e-116 420.6 275 70.2
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 9.3e-116 420.6 277 69.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.2e-115 420.2 269 70.3
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.2e-115 420.2 277 70.8
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.2e-115 420.2 277 69.7
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.6e-115 419.9 278 70.1
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.6e-115 419.9 275 69.8
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.7e-115 419.1 265 71.3
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.7e-115 419.1 265 71.3
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.7e-115 419.1 275 68.7
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.7e-115 419.1 271 70.1
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 2.7e-115 419.1 277 72.9
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 3.5e-115 418.7 271 72.3
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 4.6e-115 418.3 271 72.0
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 4.6e-115 418.3 277 70.0
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 7.8e-115 417.5 268 72.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.7e-114 416.4 270 71.1
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.7e-114 416.4 270 71.5
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 1.7e-114 416.4 276 69.6
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.7e-114 416.4 278 69.4
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 3.9e-114 415.2 271 72.0
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 7.3e-113 411.0 267 70.8
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 9.6e-113 410.6 268 69.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.3e-112 410.2 277 68.2
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.1e-111 407.1 277 67.5
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 9.0e-111 404.1 270 70.0
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 2.0e-110 402.9 277 68.6
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 3.4e-110 402.1 252 72.2
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.7e-109 399.8 284 66.9
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 3.8e-109 398.7 268 68.3
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 4.9e-109 398.3 276 66.7
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.1e-108 397.1 278 67.6
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.4e-108 396.7 290 66.2
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.4e-108 396.7 277 64.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.9e-108 396.4 278 67.3
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.9e-108 396.4 250 71.2
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.5e-107 392.1 277 64.3
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 3.5e-107 392.1 276 65.9
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.9e-106 388.7 276 63.4
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.3e-105 385.6 277 66.1
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.8e-104 382.5 275 63.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 4.0e-103 378.6 263 65.4
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 2.0e-102 376.3 277 64.3
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.6e-102 375.9 254 67.3
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 3.4e-102 375.6 254 67.3
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.4e-100 369.4 254 65.7
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.5e-97 359.4 228 68.9
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.5e-94 348.6 264 60.2
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 7.6e-94 347.8 264 60.2
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 5.1e-90 335.1 202 74.8
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 4.3e-89 332.0 256 59.0
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 7.4e-89 331.3 253 59.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-88 330.5 203 73.9
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 6.3e-88 328.2 202 75.2
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 6.3e-88 328.2 204 74.5
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 6.9e-87 324.7 277 56.3
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.7e-85 320.1 273 57.5
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 1.6e-83 313.5 278 53.6
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.1e-79 300.8 202 69.3
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.8e-79 300.1 265 52.5
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 3.8e-77 292.4 244 52.9
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.2e-72 276.6 167 71.3
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.3e-64 250.8 254 48.8
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.8e-63 246.9 168 69.6
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 7.2e-60 235.0 146 76.0
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 8.6e-45 184.9 144 56.2
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 6.1e-43 178.7 255 38.8
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.1e-39 167.9 110 64.5
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 2.1e-35 153.7 111 69.4
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 2.8e-35 153.3 250 35.6
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 5.7e-33 145.6 252 34.5
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 3.0e-29 133.3 83 66.3
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 3.7e-24 116.3 77 62.3
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 7.0e-23 112.1 68 64.7
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 6.6e-21 105.5 80 66.2
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 6.8e-18 95.5 64 64.1
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.3e-12 76.3 50 72.0
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.6e-11 74.3 63 52.4
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 5.8e-09 65.9 36 80.6


User provided reference genes

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