Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 0.0e+00 1311.6 652 100.0
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 4.3e-289 997.7 672 75.4
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 1.2e-254 883.2 652 73.0
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 5.8e-254 880.9 672 66.2
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 6.3e-248 860.9 668 65.0
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 8.2e-248 860.5 668 65.7
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.5e-241 839.7 622 66.9
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 6.9e-239 830.9 654 64.1
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 9.1e-239 830.5 647 64.0
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 1.4e-234 816.6 667 61.2
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 3.9e-234 815.1 663 61.8
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 5.1e-234 814.7 653 61.1
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 5.7e-233 811.2 652 61.5
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 1.7e-232 809.7 658 60.5
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 2.2e-232 809.3 646 62.7
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 2.2e-232 809.3 668 62.6
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.4e-231 806.6 669 60.1
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 9.1e-231 803.9 669 60.1
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 1.5e-230 803.1 655 61.1
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 5.9e-230 801.2 672 60.6
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.0e-229 800.4 669 59.9
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 2.2e-229 799.3 663 62.1
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 3.8e-229 798.5 650 61.7
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 3.8e-229 798.5 672 60.0
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 7.2e-228 794.3 669 61.3
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 1.8e-226 789.6 668 60.8
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.1e-225 786.9 644 61.6
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 3.3e-225 785.4 653 62.3
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 2.8e-224 782.3 669 57.5
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 3.7e-224 781.9 666 59.6
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 8.2e-224 780.8 649 61.3
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 1.8e-223 779.6 672 59.5
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 4.1e-223 778.5 673 59.4
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 9.1e-223 777.3 644 61.0
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 1.2e-222 776.9 672 60.0
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 1.6e-222 776.5 670 60.0
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 2.0e-222 776.2 666 59.5
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 3.5e-222 775.4 675 60.1
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 7.7e-222 774.2 679 58.8
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 1.3e-221 773.5 669 59.5
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 3.8e-221 771.9 678 59.0
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 3.8e-221 771.9 669 57.8
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 3.8e-221 771.9 675 59.0
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 1.9e-220 769.6 650 59.7
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 2.5e-220 769.2 673 58.5
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 1.6e-219 766.5 665 60.5
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 2.7e-219 765.8 647 59.2
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 8.0e-219 764.2 672 58.5
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 4.0e-218 761.9 700 56.4
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 1.3e-216 756.9 704 57.4
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 4.8e-216 755.0 666 58.4
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 6.3e-216 754.6 667 57.7
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 6.3e-216 754.6 654 59.8
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 1.4e-215 753.4 653 59.6
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 1.2e-214 750.4 647 58.6
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 3.5e-214 748.8 650 59.5
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 3.5e-214 748.8 670 58.1
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 1.7e-213 746.5 669 57.5
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 1.9e-212 743.0 654 59.0
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 3.2e-212 742.3 750 51.9
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 3.2e-212 742.3 678 57.2
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 1.0e-210 737.3 654 58.0
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 1.4e-207 726.9 679 56.1
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 4.1e-207 725.3 638 57.1
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 5.9e-206 721.5 713 55.0
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 3.6e-203 712.2 515 70.5
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 1.8e-199 699.9 688 53.1
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 5.4e-199 698.4 660 53.6
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 7.3e-196 688.0 669 53.2
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 3.6e-195 685.6 670 53.3
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 6.2e-195 684.9 667 52.6
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 4.0e-194 682.2 665 52.6
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 8.9e-194 681.0 667 52.9
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 6.6e-189 664.8 682 52.5
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 1.1e-188 664.1 682 52.3
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 1.5e-188 663.7 670 52.5
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 1.2e-187 660.6 671 52.6
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 2.1e-187 659.8 680 52.2
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 6.8e-186 654.8 673 52.3
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 8.3e-184 647.9 662 52.0
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 1.4e-183 647.1 669 52.2
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 2.1e-182 643.3 650 51.8
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 4.6e-182 642.1 678 53.4
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 4.6e-182 642.1 529 62.4
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 2.3e-181 639.8 526 63.1
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 2.3e-181 639.8 649 51.2
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 1.2e-177 627.5 461 68.3
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 2.1e-174 616.7 652 51.4
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 2.9e-168 596.3 646 49.2
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 1.9e-164 583.6 648 48.5
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 3.8e-160 569.3 679 46.7
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 3.0e-157 559.7 542 57.0
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 4.3e-156 555.8 634 47.9
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 1.5e-153 547.4 535 56.6
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 8.2e-131 471.9 645 43.7
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 1.0e-117 428.3 405 55.6
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 1.3e-115 421.4 647 38.2
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 6.1e-102 375.9 666 36.0
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 6.8e-93 345.9 400 50.8
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 8.9e-85 318.9 256 64.8
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 3.4e-76 290.4 514 38.5
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 6.0e-73 279.6 460 38.5
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 8.1e-62 242.7 384 41.4
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 3.0e-48 197.6 230 43.0
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 2.9e-43 181.0 173 49.7
Hma1.2p1_0078F.1_g039980 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.6e-41 175.3 148 55.4
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 3.4e-36 157.5 382 32.7
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 1.7e-35 155.2 98 75.5
AUR62038912 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.4e-31 139.8 225 35.1
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 8.2e-30 136.3 87 74.7
Lj6A690T73 Lonicera japonica HOM05D006559 ORTHO05D008867 7.6e-28 129.8 91 60.4
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 1.8e-21 108.6 117 53.0
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 4.1e-21 107.5 109 50.5
MBI14_g17950_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D241410 2.7e-17 94.7 138 42.0
RcHm_v2.0_Chr3g0458131 Rosa chinensis HOM05D006559 ORTHO05D050582 1.5e-15 89.0 74 62.2
BcaB04g20870 Brassica carinata HOM05D006559 ORTHO05D019951 2.9e-11 74.7 74 50.0
BcaC01g05501 Brassica carinata HOM05D006559 ORTHO05D019951 3.6e-09 67.8 92 42.4
Potri.008G105850 Populus trichocarpa HOM05D006559 ORTHO05D050582 3.6e-09 67.8 64 51.6
RcHm_v2.0_Chr4g0425071 Rosa chinensis HOM05D006559 ORTHO05D343184 2.0e-07 62.0 55 52.7
Glyma.14G110000 Glycine max HOM05D006559 ORTHO05D214058 6.3e-06 57.0 35 71.4


User provided reference genes

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