Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 3.6e-202 708.0 348 100.0
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 3.1e-185 651.7 346 89.9
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 4.9e-183 644.4 344 90.1
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 3.2e-174 615.1 344 84.9
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.3e-171 605.1 348 84.5
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.3e-171 605.1 348 84.5
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 9.6e-171 603.6 347 81.3
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 8.1e-170 600.5 348 83.3
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 6.9e-169 597.4 346 82.1
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 1.2e-168 596.7 344 82.0
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.5e-168 596.3 344 82.0
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 4.5e-168 594.7 346 81.8
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 4.5e-168 594.7 344 81.7
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 1.3e-167 593.2 348 82.5
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.3e-167 593.2 344 80.8
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 1.3e-167 593.2 344 80.8
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 1.7e-167 592.8 348 80.7
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 2.9e-167 592.0 344 80.8
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 2.9e-167 592.0 347 80.4
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 2.9e-167 592.0 347 81.3
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.8e-167 591.7 344 81.1
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 4.9e-167 591.3 344 81.1
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 4.9e-167 591.3 348 80.5
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 6.5e-167 590.9 348 80.5
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 8.4e-167 590.5 344 80.8
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 3.2e-166 588.6 348 80.2
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 1.2e-165 586.6 346 80.1
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 6.0e-165 584.3 346 78.6
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 7.9e-165 583.9 348 79.6
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 1.3e-164 583.2 344 80.8
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 1.8e-164 582.8 348 79.6
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 1.8e-164 582.8 346 79.8
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 2.3e-164 582.4 344 80.8
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 2.3e-164 582.4 342 81.3
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 3.0e-164 582.0 343 80.2
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 3.0e-164 582.0 344 79.7
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 3.9e-164 581.6 346 79.8
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 3.9e-164 581.6 344 81.1
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 5.1e-164 581.3 342 80.1
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 5.1e-164 581.3 344 80.8
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 8.7e-164 580.5 344 80.5
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 8.7e-164 580.5 344 80.2
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 8.7e-164 580.5 365 76.7
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.1e-163 580.1 344 80.2
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 2.5e-163 578.9 344 79.7
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 2.5e-163 578.9 348 79.3
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 4.3e-163 578.2 344 80.8
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 5.7e-163 577.8 342 80.1
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 7.4e-163 577.4 344 80.2
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 7.4e-163 577.4 344 79.4
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 7.4e-163 577.4 344 80.2
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 7.4e-163 577.4 342 80.4
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 7.4e-163 577.4 342 80.4
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 9.6e-163 577.0 344 80.5
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 2.8e-162 575.5 344 79.4
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 3.7e-162 575.1 342 79.5
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 3.7e-162 575.1 357 78.4
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 6.2e-162 574.3 345 80.0
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 8.2e-162 573.9 344 79.9
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 8.2e-162 573.9 345 80.0
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 8.2e-162 573.9 348 78.4
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 1.1e-161 573.5 344 79.1
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 1.1e-161 573.5 342 79.5
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 1.1e-161 573.5 342 80.4
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 2.4e-161 572.4 346 77.7
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 2.4e-161 572.4 344 78.5
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 3.1e-161 572.0 344 77.6
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 3.1e-161 572.0 346 78.9
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 4.1e-161 571.6 343 79.3
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 4.1e-161 571.6 344 79.7
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 4.1e-161 571.6 347 79.0
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 4.1e-161 571.6 344 77.6
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 6.9e-161 570.9 344 78.8
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 6.9e-161 570.9 344 79.9
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 9.0e-161 570.5 348 78.4
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 9.0e-161 570.5 344 78.5
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 1.2e-160 570.1 342 79.5
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 2.0e-160 569.3 348 77.9
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 7.6e-160 567.4 344 79.7
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.3e-159 566.6 342 78.7
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 1.7e-159 566.2 338 79.3
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.7e-159 566.2 342 79.2
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 2.2e-159 565.8 342 78.7
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.2e-159 565.8 342 79.5
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 8.4e-159 563.9 346 78.0
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 1.9e-158 562.8 361 75.6
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 3.2e-158 562.0 344 77.0
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 3.2e-158 562.0 353 76.2
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 3.2e-158 562.0 343 76.1
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 5.5e-158 561.2 342 77.8
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 4.6e-157 558.1 437 65.4
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 7.9e-157 557.4 344 76.2
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 1.3e-156 556.6 351 78.1
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 3.9e-156 555.1 358 75.4
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.6e-154 549.7 319 81.8
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.7e-154 548.5 391 69.1
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 1.4e-153 546.6 343 74.1
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.9e-151 538.9 348 75.0
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 9.4e-150 533.9 447 62.4
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 3.7e-146 521.9 342 71.3
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 1.1e-145 520.4 355 71.8
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 1.4e-145 520.0 350 73.4
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 1.6e-141 506.5 305 79.0
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 4.7e-141 505.0 344 73.3
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 6.1e-141 504.6 340 71.8
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 2.0e-139 499.6 340 69.1
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 2.8e-138 495.7 342 69.3
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 2.7e-133 479.2 342 68.7
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 2.2e-130 469.5 270 82.2
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.3e-127 460.3 327 67.0
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 3.0e-124 449.1 344 65.7
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.5e-123 446.8 255 81.6
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.7e-119 433.3 254 79.9
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 1.9e-118 429.9 343 60.9
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.6e-117 426.8 312 69.2
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 2.7e-117 426.0 312 68.9
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.5e-110 403.7 388 56.4
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 1.0e-108 397.5 232 78.4
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.9e-106 389.4 316 64.9
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 3.7e-106 389.0 340 55.6
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 3.0e-103 379.4 229 79.0
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 8.6e-103 377.9 350 59.4
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 3.4e-99 365.9 246 71.1
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 1.7e-95 353.6 342 53.5
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 1.1e-92 344.4 340 52.1
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 1.1e-89 334.3 255 67.1
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 9.2e-89 331.3 191 82.7
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 9.5e-86 321.2 190 81.6
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 7.3e-78 295.0 176 80.1
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 3.2e-73 279.6 222 64.4
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 2.8e-61 240.0 168 70.2
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 8.7e-55 218.4 135 77.8
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 8.4e-50 201.8 114 78.9
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 1.4e-49 201.1 114 78.9
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 6.0e-48 195.7 344 37.5
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 2.2e-42 177.2 290 41.4
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 5.5e-41 172.6 94 87.2
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 3.9e-39 166.4 361 33.5
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 1.0e-34 151.8 100 73.0
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.6e-24 116.7 95 60.0
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-24 116.7 81 71.6
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.2e-21 107.5 171 40.4
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 1.1e-20 105.1 263 34.2
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 3.8e-18 96.7 85 58.8
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 4.8e-13 79.7 45 82.2
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 3.2e-09 67.0 41 70.7


User provided reference genes

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