Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.1e-128 463.4 237 100.0
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 6.7e-115 417.5 237 89.0
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 2.9e-110 402.1 237 84.8
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 2.9e-102 375.6 235 79.1
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 5.1e-99 364.8 232 77.2
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 8.7e-99 364.0 233 76.0
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 9.7e-98 360.5 235 75.3
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.6e-97 359.8 237 74.7
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 3.7e-97 358.6 232 74.6
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 4.8e-97 358.2 230 76.5
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 1.8e-96 356.3 235 74.9
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.0e-95 352.8 236 73.7
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 2.0e-95 352.8 234 72.2
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 2.6e-95 352.4 237 73.0
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.4e-95 352.1 235 74.9
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 4.5e-95 351.7 231 74.9
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 5.9e-95 351.3 272 65.8
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 7.7e-95 350.9 235 72.3
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 5.0e-94 348.2 235 71.9
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 8.5e-94 347.4 235 72.8
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.1e-93 347.1 236 71.6
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 1.1e-93 347.1 235 72.8
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.2e-92 343.6 234 73.5
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 1.6e-92 343.2 235 68.9
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.6e-92 343.2 238 71.8
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.6e-92 343.2 238 71.8
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.6e-92 343.2 238 71.8
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 2.1e-92 342.8 235 72.8
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 2.7e-92 342.4 235 73.6
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 2.7e-92 342.4 235 73.6
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 2.7e-92 342.4 234 72.2
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 2.7e-92 342.4 234 72.2
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.6e-92 342.0 235 68.9
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 4.6e-92 341.7 235 72.8
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.6e-92 341.7 235 68.5
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 6.1e-92 341.3 232 71.6
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 7.9e-92 340.9 235 72.3
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 1.0e-91 340.5 235 69.8
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.0e-91 340.5 235 71.1
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.4e-91 340.1 235 71.5
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 3.9e-91 338.6 231 71.0
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 5.1e-91 338.2 233 71.2
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 5.1e-91 338.2 235 69.8
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 5.1e-91 338.2 234 67.9
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 8.8e-91 337.4 234 70.9
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 2.0e-90 336.3 234 70.9
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 2.5e-90 335.9 235 70.6
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 3.3e-90 335.5 233 67.8
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 4.3e-90 335.1 234 70.5
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.7e-89 333.2 226 71.7
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.7e-89 333.2 226 71.7
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 4.8e-89 331.6 237 70.0
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 6.3e-89 331.3 233 70.0
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.1e-88 330.5 237 69.2
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.4e-88 330.1 243 65.4
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 3.1e-88 328.9 233 69.1
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 4.1e-88 328.6 236 70.3
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 5.3e-88 328.2 235 68.5
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 5.3e-88 328.2 235 68.5
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 6.9e-88 327.8 232 70.3
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 1.2e-87 327.0 232 70.3
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.2e-87 327.0 236 69.5
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.4e-87 325.5 269 60.2
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 7.7e-87 324.3 233 68.7
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.7e-86 323.2 235 69.8
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 1.7e-86 323.2 235 69.4
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 5.0e-86 321.6 235 68.1
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 8.5e-86 320.9 220 72.7
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 5.5e-85 318.2 235 67.7
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 2.3e-83 312.8 235 67.2
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 3.0e-83 312.4 230 66.1
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 3.0e-83 312.4 230 66.1
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 3.0e-83 312.4 230 66.1
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 3.0e-83 312.4 230 66.1
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 3.0e-83 312.4 230 66.1
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 3.0e-83 312.4 235 66.8
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.1e-82 310.5 239 66.1
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 1.5e-82 310.1 230 65.7
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 2.0e-82 309.7 235 66.0
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 2.0e-82 309.7 230 67.4
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 5.7e-82 308.1 231 66.2
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 5.7e-82 308.1 231 66.2
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 9.7e-82 307.4 231 66.2
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 1.7e-81 306.6 231 65.8
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.7e-81 306.6 230 64.3
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 3.7e-81 305.4 231 65.4
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 3.7e-81 305.4 230 65.2
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 3.7e-81 305.4 231 65.8
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 8.2e-81 304.3 236 65.7
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.4e-80 303.5 230 65.7
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 3.1e-80 302.4 230 66.1
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 4.1e-80 302.0 230 64.8
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 7.0e-80 301.2 230 65.2
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.2e-79 300.4 236 63.1
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 3.8e-78 295.4 233 64.8
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 6.5e-78 294.7 247 60.7
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 1.2e-76 290.4 234 64.5
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 1.2e-68 263.8 229 60.3
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 5.2e-67 258.5 242 56.2
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 6.8e-67 258.1 179 70.4
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 5.3e-64 248.4 231 57.1
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 4.4e-58 228.8 235 53.2
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.2e-55 220.7 131 79.4
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 2.0e-47 193.4 194 51.5
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 6.6e-46 188.3 204 52.5
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 1.6e-44 183.7 133 68.4
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.2e-42 177.6 195 44.6
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 3.4e-42 176.0 192 45.8
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 4.4e-42 175.6 128 63.3
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 4.4e-42 175.6 196 45.4
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.4e-40 170.6 133 64.7
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 4.6e-39 165.6 150 54.0
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 3.0e-38 162.9 133 63.9
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 2.1e-36 156.8 194 42.3
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 9.8e-34 147.9 86 80.2
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 4.6e-31 139.0 92 75.0
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 6.4e-25 118.6 98 60.2
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 7.1e-24 115.2 89 66.3
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 3.8e-17 92.8 52 82.7
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 4.6e-15 85.9 92 44.6
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 2.3e-14 83.6 51 76.5
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 2.4e-11 73.6 197 27.4
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 5.4e-08 62.4 34 85.3


User provided reference genes

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