Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1849 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.8e-90 335.9 170 100.0
ECA247G2192 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.1e-15 87.4 119 46.2
HanXRQChr13g0413361 Helianthus annuus HOM05D000555 ORTHO05D000646 2.5e-15 86.3 112 49.1
ECA238G1888 Erigeron canadensis HOM05D003342 ORTHO05D003861 1.3e-14 84.0 117 45.3
ECA232G5065 Erigeron canadensis HOM05D000312 ORTHO05D000221 2.8e-14 82.8 81 55.6
ECA246G4253 Erigeron canadensis HOM05D000312 ORTHO05D000221 2.8e-14 82.8 81 58.0
HanXRQChr17g0544301 Helianthus annuus HOM05D000312 ORTHO05D000221 1.4e-13 80.5 108 43.5
Lsat_1_v5_gn_4_16941 Lactuca sativa HOM05D000312 ORTHO05D000221 1.4e-13 80.5 120 42.5
ECA246G1169 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.8e-13 80.1 131 40.5
HanXRQChr17g0547041 Helianthus annuus HOM05D000312 ORTHO05D000221 3.1e-13 79.3 106 47.2
HanXRQChr17g0545801 Helianthus annuus HOM05D000312 ORTHO05D000221 4.0e-13 79.0 116 41.4
Lsat_1_v5_gn_7_31840 Lactuca sativa HOM05D000312 ORTHO05D000221 5.3e-13 78.6 82 54.9
HanXRQChr07g0186351 Helianthus annuus HOM05D000312 ORTHO05D000221 6.9e-13 78.2 126 41.3
HanXRQChr10g0311721 Helianthus annuus HOM05D000312 ORTHO05D000221 6.9e-13 78.2 110 39.1
HanXRQChr10g0311421 Helianthus annuus HOM05D000312 ORTHO05D000221 1.5e-12 77.0 111 41.4
HanXRQChr16g0528701 Helianthus annuus HOM05D000312 ORTHO05D000221 1.5e-12 77.0 126 40.5
ECA246G0094 Erigeron canadensis HOM05D000312 ORTHO05D000221 2.6e-12 76.3 83 50.6
Lsat_1_v5_gn_4_16981 Lactuca sativa HOM05D000312 ORTHO05D000221 2.6e-12 76.3 96 46.9
ECA234G1945 Erigeron canadensis HOM05D003871 ORTHO05D005816 4.5e-12 75.5 80 51.2
HanXRQChr17g0547021 Helianthus annuus HOM05D000312 ORTHO05D000221 5.8e-12 75.1 117 39.3
Lsat_1_v5_gn_4_16921 Lactuca sativa HOM05D000312 ORTHO05D000221 5.8e-12 75.1 111 44.1
HanXRQChr16g0502171 Helianthus annuus HOM05D000312 ORTHO05D000221 7.6e-12 74.7 117 39.3
ECA233G1781 Erigeron canadensis HOM05D000312 ORTHO05D000221 9.9e-12 74.3 189 33.9
Lsat_1_v5_gn_4_16720 Lactuca sativa HOM05D000312 ORTHO05D000221 9.9e-12 74.3 80 52.5
HanXRQChr07g0186381 Helianthus annuus HOM05D000312 ORTHO05D000221 1.3e-11 73.9 117 44.4
HanXRQChr16g0528341 Helianthus annuus HOM05D000312 ORTHO05D000221 1.3e-11 73.9 122 42.6
HanXRQChr17g0545811 Helianthus annuus HOM05D000312 ORTHO05D000221 1.7e-11 73.6 122 39.3
Lsat_1_v5_gn_4_16680 Lactuca sativa HOM05D000312 ORTHO05D000221 1.7e-11 73.6 127 40.2
HanXRQChr10g0311631 Helianthus annuus HOM05D000312 ORTHO05D000221 2.2e-11 73.2 111 45.0
Lsat_1_v5_gn_4_16841 Lactuca sativa HOM05D000312 ORTHO05D000221 3.8e-11 72.4 82 53.7
HanXRQChr10g0311751 Helianthus annuus HOM05D000312 ORTHO05D000221 4.9e-11 72.0 111 45.9
ECA246G3271 Erigeron canadensis HOM05D000312 ORTHO05D000221 6.4e-11 71.6 76 53.9
ECA247G2859 Erigeron canadensis HOM05D000312 ORTHO05D000221 6.4e-11 71.6 78 52.6
HanXRQChr07g0187641 Helianthus annuus HOM05D000312 ORTHO05D000221 6.4e-11 71.6 87 50.6
HanXRQChr16g0520231 Helianthus annuus HOM05D000312 ORTHO05D000221 8.4e-11 71.2 114 39.5
HanXRQChr16g0528411 Helianthus annuus HOM05D000312 ORTHO05D000221 8.4e-11 71.2 127 37.0
Lsat_1_v5_gn_4_16900 Lactuca sativa HOM05D000312 ORTHO05D000221 8.4e-11 71.2 82 51.2
HanXRQChr16g0502121 Helianthus annuus HOM05D000312 ORTHO05D000221 1.1e-10 70.9 184 35.3
HanXRQChr01g0008381 Helianthus annuus HOM05D000312 ORTHO05D000221 1.4e-10 70.5 187 31.6
HanXRQChr16g0528381 Helianthus annuus HOM05D000312 ORTHO05D000221 1.4e-10 70.5 84 48.8
HanXRQChr16g0528401 Helianthus annuus HOM05D000312 ORTHO05D000221 1.4e-10 70.5 84 48.8
Lsat_1_v5_gn_4_16880 Lactuca sativa HOM05D000312 ORTHO05D000221 1.4e-10 70.5 82 50.0
HanXRQChr16g0528441 Helianthus annuus HOM05D000312 ORTHO05D000221 1.9e-10 70.1 120 43.3
Lsat_1_v5_gn_4_16820 Lactuca sativa HOM05D000312 ORTHO05D000221 1.9e-10 70.1 77 51.9
ECA238G2129 Erigeron canadensis HOM05D000312 ORTHO05D000221 2.4e-10 69.7 86 46.5
HanXRQChr10g0311701 Helianthus annuus HOM05D000312 ORTHO05D000221 2.4e-10 69.7 111 39.6
ECA234G1261 Erigeron canadensis HOM05D000312 ORTHO05D000221 7.1e-10 68.2 84 47.6
HanXRQChr16g0528431 Helianthus annuus HOM05D000312 ORTHO05D000221 7.1e-10 68.2 86 48.8
HanXRQChr07g0186291 Helianthus annuus HOM05D000312 ORTHO05D000221 1.2e-09 67.4 175 32.6
HanXRQChr16g0502091 Helianthus annuus HOM05D000312 ORTHO05D000221 1.6e-09 67.0 110 40.9
HanXRQChr10g0311741 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-09 66.6 117 41.0
HanXRQChr17g0546101 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-09 66.6 80 50.0
HanXRQChr17g0546991 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-09 66.6 108 37.0
HanXRQChr10g0311651 Helianthus annuus HOM05D000312 ORTHO05D000221 2.7e-09 66.2 114 41.2
HanXRQChr14g0440861 Helianthus annuus HOM05D000312 ORTHO05D000221 3.5e-09 65.9 111 41.4
HanXRQChr07g0186371 Helianthus annuus HOM05D000312 ORTHO05D000221 4.6e-09 65.5 80 48.8
Lsat_1_v5_gn_4_17000 Lactuca sativa HOM05D000312 ORTHO05D000221 4.6e-09 65.5 74 51.4
HanXRQChr07g0186301 Helianthus annuus HOM05D000312 ORTHO05D000221 6.0e-09 65.1 85 47.1
Lsat_1_v5_gn_4_17020 Lactuca sativa HOM05D000312 ORTHO05D000221 6.0e-09 65.1 80 50.0
CAN.G222.77 Capsicum annuum HOM05D000312 ORTHO05D000221 7.9e-09 64.7 121 28.1
HanXRQChr07g0186391 Helianthus annuus HOM05D000312 ORTHO05D000221 7.9e-09 64.7 85 47.1
HanXRQChr16g0528451 Helianthus annuus HOM05D000312 ORTHO05D000221 7.9e-09 64.7 95 41.1
Hma1.2p1_0189F.1_g082900 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 7.9e-09 64.7 82 46.3
Lsat_1_v5_gn_4_16801 Lactuca sativa HOM05D000312 ORTHO05D000221 7.9e-09 64.7 82 48.8
Rhsim12G0068900 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.0e-08 64.3 79 44.3
HanXRQChr17g0545791 Helianthus annuus HOM05D000312 ORTHO05D000221 1.3e-08 63.9 116 39.7
HanXRQChr01g0008371 Helianthus annuus HOM05D000312 ORTHO05D000221 1.8e-08 63.5 112 37.5
HanXRQChr17g0568471 Helianthus annuus HOM05D000312 ORTHO05D000221 2.3e-08 63.2 87 41.4
Sopen11g006420 Solanum pennellii HOM05D000312 ORTHO05D000221 2.3e-08 63.2 112 33.0
PGSC0003DMG402013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 2.3e-08 63.2 155 30.3
HanXRQChr13g0405721 Helianthus annuus HOM05D000312 ORTHO05D000221 3.0e-08 62.8 89 44.9
HanXRQChr16g0528471 Helianthus annuus HOM05D000312 ORTHO05D000221 3.0e-08 62.8 85 40.0
PGSC0003DMG404013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.0e-08 62.8 112 35.7
HanXRQChr07g0186681 Helianthus annuus HOM05D000312 ORTHO05D000221 5.1e-08 62.0 74 50.0
HanXRQChr14g0430711 Helianthus annuus HOM05D000312 ORTHO05D000221 5.1e-08 62.0 105 39.0
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 6.7e-08 61.6 78 43.6
HanXRQChr17g0568601 Helianthus annuus HOM05D000312 ORTHO05D000221 6.7e-08 61.6 95 40.0
ECA234G3314 Erigeron canadensis HOM05D000312 ORTHO05D000221 8.7e-08 61.2 98 39.8
HanXRQChr10g0311401 Helianthus annuus HOM05D000312 ORTHO05D000221 8.7e-08 61.2 114 36.8
HanXRQChr14g0462011 Helianthus annuus HOM05D000312 ORTHO05D000221 8.7e-08 61.2 107 38.3
Sopen11g006400 Solanum pennellii HOM05D000312 ORTHO05D000221 8.7e-08 61.2 112 34.8
Rhsim12G0067900 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.5e-07 60.5 76 47.4
HanXRQChr17g0568581 Helianthus annuus HOM05D000312 ORTHO05D000221 1.9e-07 60.1 95 40.0
Peaxi162Scf00124g01420 Petunia axillaris HOM05D000312 ORTHO05D000221 2.5e-07 59.7 79 39.2
ECA234G3616 Erigeron canadensis HOM05D000312 ORTHO05D000221 3.3e-07 59.3 86 44.2
HanXRQChr01g0019091 Helianthus annuus HOM05D000312 ORTHO05D000221 3.3e-07 59.3 94 38.3
HanXRQChr17g0568441 Helianthus annuus HOM05D000312 ORTHO05D000221 3.3e-07 59.3 123 36.6
Rhsim12G0067700 Rhododendron simsii HOM05D000312 ORTHO05D000221 3.3e-07 59.3 116 35.3
Dinv27407 Davidia involucrata HOM05D000312 ORTHO05D000221 5.6e-07 58.5 78 42.3
HanXRQChr17g0533631 Helianthus annuus HOM05D000312 ORTHO05D000221 5.6e-07 58.5 73 43.8
Nn3g18638 Nelumbo nucifera HOM05D000051 ORTHO05D000015 5.6e-07 58.5 100 40.0
Peaxi162Scf00179g00816 Petunia axillaris HOM05D000312 ORTHO05D000221 5.6e-07 58.5 85 37.6
Sopen11g009210 Solanum pennellii HOM05D000312 ORTHO05D011153 7.4e-07 58.2 114 30.7
CAN.G222.74 Capsicum annuum HOM05D000312 ORTHO05D020289 9.6e-07 57.8 129 28.7
HanXRQChr07g0187671 Helianthus annuus HOM05D000312 ORTHO05D000221 9.6e-07 57.8 74 45.9
HanXRQChr17g0547031 Helianthus annuus HOM05D000312 ORTHO05D000221 9.6e-07 57.8 122 35.2
Peaxi162Scf00179g00715 Petunia axillaris HOM05D000312 ORTHO05D000221 1.3e-06 57.4 74 43.2
Peaxi162Scf00179g00815 Petunia axillaris HOM05D000312 ORTHO05D000221 1.3e-06 57.4 95 33.7
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 1.3e-06 57.4 130 34.6
HanXRQChr07g0186711 Helianthus annuus HOM05D000312 ORTHO05D000221 1.6e-06 57.0 83 45.8
Nitab4.5_0001438g0180 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.1e-06 56.6 81 40.7
HanXRQChr16g0502101 Helianthus annuus HOM05D000312 ORTHO05D000221 2.8e-06 56.2 116 35.3
Oeu057149.1 Olea europaea HOM05D000312 ORTHO05D000221 2.8e-06 56.2 119 32.8
CAN.G1602.1 Capsicum annuum HOM05D000312 ORTHO05D000221 3.7e-06 55.8 117 31.6
Dinv27405 Davidia involucrata HOM05D000312 ORTHO05D000221 3.7e-06 55.8 77 42.9
HanXRQChr16g0502141 Helianthus annuus HOM05D000312 ORTHO05D000221 3.7e-06 55.8 128 34.4
Nitab4.5_0001840g0070 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.7e-06 55.8 117 37.6
Nitab4.5_0002548g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.7e-06 55.8 114 33.3
Nitab4.5_0008981g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.7e-06 55.8 86 39.5
Peaxi162Scf00124g01418 Petunia axillaris HOM05D000312 ORTHO05D000221 3.7e-06 55.8 153 28.1
Peaxi162Scf00618g00746 Petunia axillaris HOM05D000312 ORTHO05D000221 3.7e-06 55.8 92 34.8
Actinidia31916 Actinidia chinensis HOM05D000312 ORTHO05D000221 4.8e-06 55.5 73 46.6
Hma1.2p1_0189F.1_g082790 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 4.8e-06 55.5 125 35.2
Lsat_1_v5_gn_1_81120 Lactuca sativa HOM05D000312 ORTHO05D000221 4.8e-06 55.5 82 39.0
Nitab4.5_0000027g0310 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.8e-06 55.5 112 32.1
Nitab4.5_0005124g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.8e-06 55.5 119 32.8
Peaxi162Scf00179g00710 Petunia axillaris HOM05D000312 ORTHO05D000221 4.8e-06 55.5 126 29.4
TAR371G0209 Trochodendron aralioides HOM05D000312 ORTHO05D000221 4.8e-06 55.5 74 39.2
TAR371G0223 Trochodendron aralioides HOM05D000312 ORTHO05D000221 4.8e-06 55.5 74 39.2
Lsat_1_v5_gn_1_81001 Lactuca sativa HOM05D000312 ORTHO05D000221 6.2e-06 55.1 83 41.0
Peaxi162Scf00026g01914 Petunia axillaris HOM05D000312 ORTHO05D000221 6.2e-06 55.1 113 37.2
Peaxi162Scf00618g00630 Petunia axillaris HOM05D000312 ORTHO05D000221 6.2e-06 55.1 125 30.4
Rhsim12G0069100 Rhododendron simsii HOM05D000312 ORTHO05D000221 6.2e-06 55.1 70 45.7
ECA234G0786 Erigeron canadensis HOM05D000312 ORTHO05D000221 8.1e-06 54.7 63 50.8
HanXRQChr17g0568551 Helianthus annuus HOM05D000312 ORTHO05D000221 8.1e-06 54.7 85 38.8
Lsat_1_v5_gn_4_17080 Lactuca sativa HOM05D000312 ORTHO05D000221 8.1e-06 54.7 72 40.3
Nn3g18635 Nelumbo nucifera HOM05D000051 ORTHO05D000015 8.1e-06 54.7 64 45.3


User provided reference genes

Program Settings