Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 8.8e-135 484.6 392 100.0
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 3.8e-85 319.7 386 73.6
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.8e-79 300.8 251 71.3
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.2e-78 298.1 260 70.4
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 8.4e-77 292.0 274 67.2
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.4e-76 291.2 251 69.7
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 4.2e-76 289.7 260 66.9
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 9.3e-76 288.5 261 66.7
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 9.3e-76 288.5 261 66.7
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.6e-75 287.7 229 72.1
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 2.7e-75 287.0 251 67.7
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 6.0e-75 285.8 380 61.6
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 7.8e-75 285.4 257 68.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 7.8e-75 285.4 250 68.8
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.7e-74 284.3 380 62.9
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 2.3e-74 283.9 229 72.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 3.9e-74 283.1 253 68.4
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 5.1e-74 282.7 251 68.1
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 8.7e-74 282.0 254 67.3
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.5e-73 281.2 165 84.2
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.9e-73 280.8 230 71.7
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.9e-73 280.8 230 71.7
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.9e-73 280.8 262 67.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.9e-73 280.8 262 67.9
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 3.3e-73 280.0 384 63.8
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 4.3e-73 279.6 249 67.9
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.3e-73 279.6 264 67.8
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.6e-73 279.3 230 71.7
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 9.6e-73 278.5 233 70.0
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 9.6e-73 278.5 258 66.3
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.3e-72 278.1 262 67.6
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.3e-72 278.1 229 74.7
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.3e-72 278.1 260 67.3
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.6e-72 277.7 387 64.6
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.6e-72 277.7 164 84.1
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.6e-72 277.7 261 66.7
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.1e-72 277.3 268 61.9
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 2.1e-72 277.3 228 68.9
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 2.1e-72 277.3 259 66.0
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.8e-72 276.9 264 67.4
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 4.8e-72 276.2 262 66.4
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.2e-72 275.8 228 73.7
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 6.2e-72 275.8 388 62.1
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 6.2e-72 275.8 262 71.0
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 6.2e-72 275.8 256 65.2
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.1e-71 275.0 253 68.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.8e-71 274.2 263 65.4
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.8e-71 274.2 364 53.3
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 4.0e-71 273.1 257 69.3
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 6.9e-71 272.3 228 72.4
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.9e-71 272.3 259 66.4
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 9.0e-71 271.9 228 71.5
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 2.0e-70 270.8 260 65.8
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.5e-70 269.6 258 69.4
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 5.8e-70 269.2 231 73.2
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 9.9e-70 268.5 230 69.1
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.2e-69 267.3 229 70.7
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.2e-69 267.3 166 80.1
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 3.8e-69 266.5 270 67.8
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 4.9e-69 266.2 257 64.2
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 8.4e-69 265.4 257 69.3
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 8.4e-69 265.4 260 66.2
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.1e-68 265.0 216 69.0
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-68 265.0 382 62.0
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.9e-68 264.2 228 71.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.9e-68 264.2 165 78.8
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 3.2e-68 263.5 229 70.7
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 3.2e-68 263.5 259 68.7
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 5.4e-68 262.7 228 68.9
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 5.4e-68 262.7 229 68.1
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 7.1e-68 262.3 165 78.2
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 7.1e-68 262.3 230 70.4
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 9.3e-68 261.9 230 68.3
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 1.6e-67 261.2 229 69.0
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.6e-67 261.2 229 69.0
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.6e-67 261.2 249 67.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 4.6e-67 259.6 229 69.9
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 7.9e-67 258.8 260 67.7
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.0e-66 258.5 229 68.6
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 1.8e-66 257.7 229 69.4
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 6.7e-66 255.8 232 71.6
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.5e-65 254.6 381 55.6
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.9e-65 254.2 258 66.3
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 7.4e-65 252.3 252 59.9
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.6e-64 251.1 250 67.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 4.8e-64 249.6 230 72.6
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 8.1e-64 248.8 232 66.8
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 5.3e-63 246.1 160 73.8
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.7e-61 241.1 165 70.3
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 6.4e-61 239.2 165 68.5
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 6.4e-61 239.2 165 68.5
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 6.4e-61 239.2 165 68.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 6.4e-61 239.2 165 68.5
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 8.4e-61 238.8 246 61.8
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.1e-60 238.4 147 79.6
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 3.2e-60 236.9 165 67.9
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 2.7e-59 233.8 246 60.6
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 5.1e-58 229.6 167 70.1
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 5.1e-58 229.6 262 64.9
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.2e-54 218.4 165 64.8
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 4.5e-54 216.5 164 64.6
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 2.5e-52 210.7 155 67.7
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-47 194.9 165 57.6
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-47 194.9 165 57.6
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.9e-45 187.2 238 48.7
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.9e-45 187.2 238 48.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.6e-43 181.4 168 69.0
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.5e-38 164.9 152 58.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.1e-31 140.2 165 47.9
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.1e-27 127.9 167 44.9
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 3.1e-23 114.0 166 40.4
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 4.1e-23 113.6 159 40.3
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 4.8e-16 90.1 62 67.7
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 3.5e-14 84.0 139 36.7
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 4.7e-11 73.6 112 39.3
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.0e-09 68.2 95 43.2
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.1e-07 62.4 115 35.7
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 9.1e-07 59.3 82 40.2
HPP92_023605 Vanilla planifolia HOM05D006571 ORTHO05D007771 7.7e-06 56.2 115 55.7


User provided reference genes

Program Settings