Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.8e-82 308.5 151 100.0
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 3.2e-62 241.9 144 82.6
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 4.8e-58 228.0 137 80.3
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.6e-56 222.2 140 73.6
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.5e-56 221.5 144 73.6
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 7.6e-56 220.7 148 68.9
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.7e-55 219.5 148 70.9
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.7e-55 219.5 148 70.9
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 4.9e-55 218.0 146 69.2
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 8.4e-55 217.2 139 71.9
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.4e-54 216.5 153 69.3
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.9e-54 216.1 134 75.4
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.9e-54 216.1 134 75.4
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.9e-54 216.1 142 71.1
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.4e-54 215.7 142 73.2
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 2.4e-54 215.7 139 71.9
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 4.2e-54 214.9 160 65.6
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 5.5e-54 214.5 127 76.4
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 5.5e-54 214.5 127 76.4
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.5e-54 214.5 140 73.6
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 9.3e-54 213.8 142 71.1
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-53 213.4 127 75.6
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 1.2e-53 213.4 127 75.6
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 1.2e-53 213.4 134 74.6
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.6e-53 213.0 142 71.1
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.1e-53 212.6 147 68.0
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 3.5e-53 211.8 127 75.6
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 4.6e-53 211.5 128 75.8
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 4.6e-53 211.5 137 71.5
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 7.9e-53 210.7 142 69.7
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.3e-52 209.9 144 66.7
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.8e-52 209.5 141 70.9
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.8e-52 209.5 142 69.0
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.3e-52 209.1 144 65.3
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 2.3e-52 209.1 127 74.0
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.3e-52 209.1 133 72.9
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 2.3e-52 209.1 133 71.4
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 3.0e-52 208.8 138 69.6
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.0e-52 208.8 137 69.3
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.9e-52 208.4 142 66.9
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 5.1e-52 208.0 142 67.6
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.1e-52 208.0 165 63.6
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 5.1e-52 208.0 131 72.5
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 6.7e-52 207.6 140 72.1
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 6.7e-52 207.6 137 69.3
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 8.7e-52 207.2 137 69.3
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 8.7e-52 207.2 137 69.3
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.1e-51 206.8 140 65.0
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.5e-51 206.5 138 70.3
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.9e-51 206.1 137 67.9
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.9e-51 206.1 151 63.6
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 1.9e-51 206.1 140 67.1
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.9e-51 206.1 131 71.8
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 3.3e-51 205.3 142 65.5
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 3.3e-51 205.3 140 65.0
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.3e-51 205.3 137 69.3
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.3e-51 205.3 119 79.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 4.3e-51 204.9 140 64.3
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 4.3e-51 204.9 142 67.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 5.6e-51 204.5 137 69.3
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 5.6e-51 204.5 137 68.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 5.6e-51 204.5 134 69.4
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 7.4e-51 204.1 141 66.0
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.3e-50 203.4 139 66.9
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.3e-50 203.4 140 67.1
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 1.6e-50 203.0 140 66.4
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 2.1e-50 202.6 142 67.6
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.1e-50 202.6 140 65.7
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 2.8e-50 202.2 123 72.4
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 2.8e-50 202.2 152 61.2
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.8e-50 202.2 140 65.0
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.8e-50 202.2 140 67.1
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 6.2e-50 201.1 137 67.2
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 8.1e-50 200.7 123 71.5
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.1e-49 200.3 137 70.1
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.1e-49 200.3 136 68.4
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.8e-49 199.5 137 67.2
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 5.3e-49 198.0 139 65.5
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 6.9e-49 197.6 122 70.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 9.0e-49 197.2 164 59.1
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.2e-48 196.8 137 66.4
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.5e-48 196.4 137 65.7
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 3.4e-48 195.3 132 67.4
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 4.5e-48 194.9 142 64.8
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 5.8e-48 194.5 138 65.2
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.3e-47 193.4 147 59.2
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.7e-47 193.0 138 65.2
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 2.9e-47 192.2 129 67.4
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.9e-47 192.2 136 62.5
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 3.8e-47 191.8 142 62.7
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 4.9e-47 191.4 134 65.7
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 6.5e-47 191.0 141 63.1
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.4e-46 189.9 111 77.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.4e-46 189.9 136 65.4
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.9e-46 189.5 165 56.4
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.2e-45 186.8 131 63.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 7.9e-45 184.1 128 66.4
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.5e-43 179.9 113 72.6
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 1.5e-43 179.9 127 63.0
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 9.6e-43 177.2 112 72.3
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.6e-42 176.4 186 50.5
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.6e-42 176.4 116 67.2
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 2.1e-42 176.0 166 56.6
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 2.8e-42 175.6 116 69.8
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 3.7e-42 175.3 116 66.4
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 5.9e-40 167.9 110 68.2
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 5.9e-40 167.9 91 83.5
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 7.2e-38 161.0 122 62.3
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 2.1e-37 159.5 126 57.1
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 3.6e-37 158.7 115 64.3
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 4.6e-37 158.3 121 56.2
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.9e-36 155.2 89 79.8
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 7.4e-35 151.0 94 75.5
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 4.8e-34 148.3 93 75.3
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.2e-32 143.7 95 73.7
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.3e-31 140.2 103 66.0
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.2e-31 139.4 98 70.4
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 6.5e-31 137.9 101 70.3
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 8.5e-31 137.5 109 58.7
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 8.5e-31 137.5 109 57.8
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 9.4e-30 134.0 90 63.3
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.8e-28 129.8 89 74.2
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.6e-27 125.9 73 76.7
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.1e-25 120.6 115 47.0
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.4e-25 120.2 113 51.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.0e-20 104.0 90 48.9
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.3e-18 97.1 111 43.2
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.1e-17 92.4 93 51.6
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 2.2e-15 86.3 112 39.3
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.9e-15 85.9 73 63.0
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 1.6e-13 80.1 65 58.5
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 3.1e-09 65.9 42 73.8
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 5.9e-08 61.6 49 65.3
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 2.2e-07 59.7 83 41.0
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.9e-06 56.6 43 51.2


User provided reference genes

Program Settings