Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 3.0e-62 241.9 140 100.0
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 5.8e-26 121.3 138 54.3
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 4.9e-17 91.7 104 51.0
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 8.7e-14 80.9 108 44.4
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 2.5e-13 79.3 103 43.7
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 2.5e-13 79.3 103 47.6
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 3.3e-13 79.0 102 45.1
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 1.3e-12 77.0 111 43.2
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 2.1e-12 76.3 103 44.7
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 6.3e-12 74.7 107 44.9
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 6.3e-12 74.7 107 44.9
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 8.2e-12 74.3 109 42.2
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 1.1e-11 73.9 108 41.7
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 1.1e-11 73.9 113 50.4
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.4e-11 73.6 101 46.5
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.4e-11 72.8 103 41.7
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 2.4e-11 72.8 104 47.1
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 3.1e-11 72.4 103 39.8
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 5.3e-11 71.6 105 45.7
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 6.9e-11 71.2 130 35.4
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.2e-10 70.5 107 45.8
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 1.2e-10 70.5 113 49.6
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.5e-10 70.1 108 42.6
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.0e-10 69.7 103 40.8
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 2.0e-10 69.7 106 44.3
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 5.9e-10 68.2 127 33.9
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 7.6e-10 67.8 103 42.7
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 7.6e-10 67.8 106 38.7
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 1.0e-09 67.4 106 41.5
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 1.0e-09 67.4 111 40.5
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 1.0e-09 67.4 106 42.5
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 1.0e-09 67.4 110 40.9
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 1.0e-09 67.4 104 41.3
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 1.3e-09 67.0 152 32.9
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 2.2e-09 66.2 99 40.4
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 2.2e-09 66.2 105 39.0
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 2.9e-09 65.9 106 43.4
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 2.9e-09 65.9 106 42.5
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 3.8e-09 65.5 110 40.0
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 5.0e-09 65.1 139 33.8
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 5.0e-09 65.1 103 37.9
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 6.5e-09 64.7 124 37.1
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 8.5e-09 64.3 104 39.4
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.4e-08 63.5 104 39.4
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.9e-08 63.2 89 42.7
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.5e-08 62.8 133 39.1
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 2.5e-08 62.8 104 40.4
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 2.5e-08 62.8 86 43.0
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 5.5e-08 61.6 105 40.0
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 5.5e-08 61.6 70 50.0
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 5.5e-08 61.6 84 44.0
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 5.5e-08 61.6 70 50.0
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 5.5e-08 61.6 70 50.0
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 5.5e-08 61.6 84 44.0
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 5.5e-08 61.6 70 50.0
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 7.2e-08 61.2 103 52.4
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 9.3e-08 60.8 117 35.9
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 1.2e-07 60.5 84 42.9
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 1.6e-07 60.1 106 39.6
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 2.1e-07 59.7 107 38.3
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 2.7e-07 59.3 104 42.3
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 2.7e-07 59.3 101 38.6
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.6e-07 58.9 129 34.9
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 3.6e-07 58.9 127 37.0
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 3.6e-07 58.9 125 36.0
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 6.1e-07 58.2 113 38.9
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 6.1e-07 58.2 103 35.9
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 7.9e-07 57.8 28 89.3
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.0e-06 57.4 129 34.9
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 1.8e-06 56.6 111 39.6
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 1.8e-06 56.6 101 35.6
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 2.3e-06 56.2 100 40.0
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 2.3e-06 56.2 100 40.0
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 2.3e-06 56.2 101 35.6
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 2.3e-06 56.2 131 34.4
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 3.0e-06 55.8 114 38.6
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 3.9e-06 55.5 99 39.4
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 6.7e-06 54.7 119 35.3
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 6.7e-06 54.7 105 37.1


User provided reference genes

Program Settings