Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 4.9e-123 444.5 230 100.0
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.2e-45 184.5 107 86.0
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.1e-44 183.3 102 90.2
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 3.0e-43 179.5 100 90.0
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 3.0e-43 179.5 100 90.0
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 2.1e-41 173.3 100 86.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 2.8e-41 172.9 99 86.9
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-41 171.8 100 88.0
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.4e-40 170.6 100 86.0
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.1e-40 169.5 100 86.0
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.7e-38 163.7 124 71.8
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.7e-38 163.7 124 71.8
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.7e-38 163.7 124 71.8
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.7e-38 163.7 124 71.8
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 6.4e-38 161.8 114 76.3
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.4e-37 160.6 88 88.6
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 2.4e-37 159.8 112 75.0
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.4e-37 159.8 102 75.5
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.5e-36 156.0 94 84.0
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.8e-32 143.7 107 70.1
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 2.4e-32 143.3 91 80.2
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 5.8e-31 138.7 78 87.2
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 1.4e-29 134.0 97 72.2
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.4e-29 134.0 97 72.2
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 4.2e-29 132.5 81 84.0
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 4.2e-29 132.5 82 81.7
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 4.2e-29 132.5 81 84.0
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 4.2e-29 132.5 81 84.0
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 4.2e-29 132.5 81 84.0
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 4.2e-29 132.5 81 84.0
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.1e-28 130.2 114 63.2
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 3.5e-28 129.4 97 70.1
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 7.8e-28 128.3 69 89.9
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 1.0e-27 127.9 81 82.7
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.3e-27 127.5 78 79.5
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.3e-27 127.5 82 79.3
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 2.3e-27 126.7 72 87.5
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.0e-27 126.3 75 84.0
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 2.5e-26 123.2 73 86.3
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 1.6e-25 120.6 74 82.4
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 3.6e-25 119.4 117 58.1
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.1e-24 116.3 85 72.9
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.2e-23 114.4 73 79.5
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.5e-23 114.0 94 63.8
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.8e-22 109.4 61 86.9
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.8e-22 109.4 61 86.9
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.2e-21 105.9 73 76.7
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 1.6e-20 104.0 63 81.0
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.5e-20 102.8 73 75.3
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.5e-20 102.8 73 75.3
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.5e-20 102.8 73 75.3
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 7.8e-20 101.7 55 83.6
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-19 100.9 56 87.5
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 3.0e-19 99.8 70 70.0
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 6.6e-19 98.6 78 66.7
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 1.1e-18 97.8 64 75.0
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 1.5e-18 97.4 52 90.4
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 1.5e-18 97.4 56 85.7
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 4.3e-18 95.9 65 73.8
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.3e-14 84.3 60 75.0
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 2.2e-14 83.6 75 61.3
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 2.9e-14 83.2 57 71.9
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 8.4e-14 81.6 69 68.1
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 1.1e-13 81.3 56 73.2
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-13 80.5 55 69.1
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 9.3e-13 78.2 68 55.9
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 2.1e-12 77.0 54 68.5
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 2.3e-11 73.6 78 53.8
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 6.7e-11 72.0 57 68.4
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.5e-10 70.9 46 73.9
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 1.5e-10 70.9 46 73.9
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.6e-09 67.4 45 68.9
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 3.7e-09 66.2 46 69.6
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 8.1e-09 65.1 65 58.5
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 1.4e-08 64.3 52 71.2
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 5.3e-08 62.4 58 58.6
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.5e-07 59.3 51 64.7
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-06 57.0 27 96.3
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-06 57.0 27 96.3
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-06 57.0 27 96.3
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-06 57.0 27 96.3
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-06 57.0 27 96.3
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 2.2e-06 57.0 27 96.3
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 3.8e-06 56.2 33 81.8


User provided reference genes

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