Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 3.9e-125 451.4 220 100.0
Lsat_1_v5_gn_3_28040 Lactuca sativa HOM05D006905 ORTHO05D003398 2.6e-89 332.4 222 76.1
HanXRQChr12g0384101 Helianthus annuus HOM05D006905 ORTHO05D003398 4.9e-88 328.2 223 73.5
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 3.3e-68 262.3 222 61.3
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 1.4e-66 256.9 213 60.1
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 2.4e-66 256.1 221 59.3
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 1.2e-65 253.8 222 59.5
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 2.2e-64 249.6 199 62.3
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 3.8e-64 248.8 193 61.7
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 1.4e-63 246.9 186 62.9
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 1.4e-63 246.9 225 56.4
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 1.9e-63 246.5 216 58.8
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 4.2e-63 245.4 217 57.6
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 7.2e-63 244.6 211 57.8
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 7.2e-63 244.6 228 55.3
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 7.2e-63 244.6 215 56.3
CANSAT54G0047 Cannabis sativa HOM05D006905 ORTHO05D003398 2.7e-62 242.7 184 64.7
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 2.7e-62 242.7 207 57.5
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 3.6e-62 242.3 223 54.7
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.4e-61 240.4 222 55.0
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 2.3e-61 239.6 223 54.3
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 8.8e-61 237.7 216 54.6
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 1.5e-60 236.9 181 60.8
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 2.0e-60 236.5 216 54.2
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 2.6e-60 236.1 225 54.7
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.6e-60 236.1 221 54.3
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 3.3e-60 235.7 219 54.3
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 5.7e-60 235.0 219 54.8
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 5.7e-60 235.0 216 54.2
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 5.7e-60 235.0 181 60.2
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 5.7e-60 235.0 180 61.1
CsaV3_2G004310 Cucumis sativus L. HOM05D006905 ORTHO05D003398 1.7e-59 233.4 177 64.4
Sed0006348 Sechium edule HOM05D006905 ORTHO05D003398 1.7e-59 233.4 220 55.9
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 2.8e-59 232.6 198 57.1
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 8.2e-59 231.1 192 57.8
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 8.2e-59 231.1 197 55.8
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 8.2e-59 231.1 176 61.9
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.1e-58 230.7 204 57.4
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 1.8e-58 229.9 221 54.3
MBI04_g20814_MAGBIO Magnolia biondii HOM05D006905 ORTHO05D003398 4.1e-58 228.8 206 54.4
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 5.3e-58 228.4 180 58.9
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 9.1e-58 227.6 219 53.9
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 2.0e-57 226.5 229 51.1
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 2.6e-57 226.1 183 60.7
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 1.3e-56 223.8 220 51.8
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 1.3e-56 223.8 203 54.2
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 2.2e-56 223.0 188 58.0
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 8.5e-56 221.1 177 60.5
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 1.1e-55 220.7 185 55.7
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 1.4e-55 220.3 215 53.0
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 3.2e-55 219.2 213 52.6
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 3.2e-55 219.2 182 56.6
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 4.2e-55 218.8 215 52.6
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 9.4e-55 217.6 215 51.2
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 6.1e-54 214.9 174 59.8
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 7.9e-54 214.5 219 51.6
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 5.2e-53 211.8 226 50.9
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 6.7e-53 211.5 219 51.6
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 1.5e-52 210.3 179 58.7
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 4.4e-52 208.8 211 52.6
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 5.7e-52 208.4 184 52.2
SalBow8G0693 Salvia bowleyana HOM05D006905 ORTHO05D003398 9.7e-52 207.6 148 62.2
Sp3g03710 Schrenkiella parvula HOM05D006905 ORTHO05D003398 4.8e-51 205.3 180 56.7
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 8.2e-51 204.5 219 51.6
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 1.8e-50 203.4 215 50.7
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 3.1e-50 202.6 177 58.2
BolC5t34896H Brassica oleracea HOM05D006905 ORTHO05D003398 1.6e-49 200.3 178 56.2
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 1.6e-49 200.3 178 57.9
A05p42710 Brassica napus HOM05D006905 ORTHO05D003398 2.0e-49 199.9 178 55.6
BcaNung06537 Brassica carinata HOM05D006905 ORTHO05D003398 2.6e-49 199.5 180 55.6
C05p62430 Brassica napus HOM05D006905 ORTHO05D003398 2.6e-49 199.5 180 55.6
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 2.2e-48 196.4 183 56.3
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 3.8e-48 195.7 222 47.3
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 6.5e-48 194.9 188 55.3
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 2.5e-47 193.0 178 54.5
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 2.1e-46 189.9 183 51.9
CSS0017923 Camellia sinensis var. sinensis HOM05D006905 ORTHO05D003398 3.6e-46 189.1 152 59.9
FAN05G4190 Fragaria x ananassa HOM05D006905 ORTHO05D003398 3.6e-46 189.1 222 46.8
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 6.1e-46 188.3 196 50.5
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 1.0e-45 187.6 190 47.4
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 1.4e-45 187.2 175 50.9
Medtr1g081280 Medicago truncatula HOM05D006905 ORTHO05D003398 1.8e-42 176.8 184 50.0
BcaC05g30566 Brassica carinata HOM05D006905 ORTHO05D003398 2.4e-42 176.4 129 66.7
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 9.1e-42 174.5 183 47.0
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 3.6e-38 162.5 132 53.0
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 4.7e-38 162.2 144 49.3
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 4.0e-37 159.1 144 48.6
Cc02_g31660 Coffea canephora HOM05D006905 ORTHO05D003398 8.8e-37 157.9 138 55.1
Haze_04329 Corylus avellana HOM05D006905 ORTHO05D003398 2.0e-36 156.8 145 57.2
arahy.Tifrunner.gnm1.ann1.N7GLTS Arachis hypogaea HOM05D006905 ORTHO05D003398 1.7e-35 153.7 189 47.1
Lj5g0004067 Lotus japonicus HOM05D006905 ORTHO05D003398 1.4e-34 150.6 129 58.1
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 7.7e-33 144.8 191 38.7
ClCG02G016440 Citrullus lanatus HOM05D006905 ORTHO05D003398 5.0e-32 142.1 184 44.6
MELO3C004363.2 Cucumis melo HOM05D006905 ORTHO05D003398 5.0e-32 142.1 114 63.2
Sabra13G0035600 Salix brachista HOM05D006905 ORTHO05D003398 8.0e-30 134.8 373 31.6
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 1.2e-28 131.0 174 42.0
Glyma.20G227801 Glycine max HOM05D006905 ORTHO05D003398 3.4e-28 129.4 116 55.2
Rhsim07G0175500 Rhododendron simsii HOM05D006905 ORTHO05D003398 5.7e-28 128.6 109 59.6
Ah.06g192620 Amaranthus hybridus HOM05D000416 ORTHO05D000322 8.3e-27 124.8 152 42.1
Oeu023372.2 Olea europaea HOM05D006905 ORTHO05D003398 1.2e-22 110.9 68 69.1
Psat6g147000 Pisum sativum HOM05D002360 ORTHO05D006297 6.8e-21 105.1 83 61.4
Mapoly0153s0018 Marchantia polymorpha HOM05D007525 ORTHO05D003398 5.7e-20 102.1 136 35.3
SMO358G0422 Selaginella moellendorffii HOM05D007525 ORTHO05D003398 7.5e-20 101.7 146 32.9
AUR62004986 Chenopodium quinoa HOM05D006905 ORTHO05D003398 9.8e-20 101.3 66 62.1
Gohir.A08G226300 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.7e-19 100.5 85 55.3
CBR_g31994 Chara braunii HOM05D007525 ORTHO05D003398 4.9e-19 99.0 144 32.6
Pp3c4_17920 Physcomitrium patens HOM05D007525 ORTHO05D003398 1.4e-18 97.4 180 31.7
HanXRQChr06g0176711 Helianthus annuus HOM05D006905 ORTHO05D003398 7.0e-18 95.1 55 74.5
Cc02_g31650 Coffea canephora HOM05D006905 ORTHO05D003398 3.5e-17 92.8 56 66.1
SMO146G0019 Selaginella moellendorffii HOM05D006905 ORTHO05D003398 4.6e-17 92.4 137 36.5
Nn1g01647 Nelumbo nucifera HOM05D007525 ORTHO05D003398 5.9e-17 92.0 205 28.3
VMungo0331G0679 Vigna mungo HOM05D007525 ORTHO05D003398 5.9e-17 92.0 206 30.6
Hma1.2p1_0083F.1_g042790 Hydrangea macrophylla HOM05D006905 ORTHO05D003398 7.8e-17 91.7 74 55.4
Cfa003884 Carpinus fangiana HOM05D007525 ORTHO05D003398 1.3e-16 90.9 224 28.6
CANSAT56G0175 Cannabis sativa HOM05D007525 ORTHO05D003398 2.3e-16 90.1 190 30.5
Ca_03496_v3 Cicer arietinum L. HOM05D007525 ORTHO05D003398 3.0e-16 89.7 222 29.3
GSVIVG01026980001 Vitis vinifera HOM05D007525 ORTHO05D003398 8.6e-16 88.2 212 27.8
Manes.05G030450 Manihot esculenta HOM05D007525 ORTHO05D003398 1.1e-15 87.8 214 29.0
Psat4g157560 Pisum sativum HOM05D007525 ORTHO05D003398 1.9e-15 87.0 207 30.9
CBR_g23482 Chara braunii HOM05D006905 ORTHO05D003398 2.5e-15 86.7 139 35.3
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.3e-15 86.3 237 28.3
TAR636G1192 Trochodendron aralioides HOM05D007525 ORTHO05D003398 3.3e-15 86.3 202 29.2
Medtr8g028545 Medicago truncatula HOM05D007525 ORTHO05D003398 5.6e-15 85.5 198 30.3
Lj3g0004891 Lotus japonicus HOM05D007525 ORTHO05D003398 7.3e-15 85.1 198 30.3
FvH4_7g15085 Fragaria vesca HOM05D007525 ORTHO05D003398 9.5e-15 84.7 238 28.2
Aqoxy7G00302 Aquilegia oxysepala HOM05D007525 ORTHO05D003398 1.2e-14 84.3 175 28.0
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.2e-14 84.3 186 30.1
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.2e-14 84.3 186 30.1
Oeu036594.1 Olea europaea HOM05D007525 ORTHO05D003398 1.2e-14 84.3 198 30.8
HanXRQChr03g0093451 Helianthus annuus HOM05D007525 ORTHO05D003398 1.6e-14 84.0 217 27.2
EL10Ac1g00368 Beta vulgaris HOM05D007525 ORTHO05D003398 2.1e-14 83.6 172 29.1
Cpa.g.sc184.25 Carica papaya HOM05D007525 ORTHO05D003398 2.1e-14 83.6 136 31.6
Thecc.01G354100 Theobroma cacao HOM05D007525 ORTHO05D003398 2.1e-14 83.6 227 28.2
Cre06.g292400 Chlamydomonas reinhardtii HOM05D007525 ORTHO05D003398 2.8e-14 83.2 137 29.2
MCO05G605 Micromonas commoda HOM05D007525 ORTHO05D003398 2.8e-14 83.2 134 32.8
PSO478G5123 Papaver somniferum HOM05D007525 ORTHO05D003398 2.8e-14 83.2 193 28.5
Potri.002G162800 Populus trichocarpa HOM05D007525 ORTHO05D003398 2.8e-14 83.2 233 25.8
Prupe.2G175600 Prunus persica HOM05D007525 ORTHO05D003398 3.6e-14 82.8 207 27.1
RcHm_v2.0_Chr1g0357281 Rosa chinensis HOM05D007525 ORTHO05D003398 3.6e-14 82.8 195 29.2
MSTRG.4841 Avicennia marina HOM05D007525 ORTHO05D003398 4.7e-14 82.4 197 27.9
Gohir.D07G146200 Gossypium hirsutum HOM05D007525 ORTHO05D003398 4.7e-14 82.4 194 27.3
Gorai.001G158400 Gossypium raimondii HOM05D007525 ORTHO05D003398 4.7e-14 82.4 194 27.3
Potri.013G037050 Populus trichocarpa HOM05D006905 ORTHO05D003398 4.7e-14 82.4 117 40.2
Actinidia10060 Actinidia chinensis HOM05D007525 ORTHO05D003398 6.2e-14 82.0 219 27.4
Migut.N01460 Erythranthe guttata HOM05D007525 ORTHO05D003398 8.0e-14 81.6 207 28.5
Eucgr.E00102 Eucalyptus grandis HOM05D007525 ORTHO05D003398 8.0e-14 81.6 172 29.7
Zm00001eb073280 Zea mays HOM05D007525 ORTHO05D003398 8.0e-14 81.6 128 35.2
Ah.05g180250 Amaranthus hybridus HOM05D007525 ORTHO05D003398 1.4e-13 80.9 172 28.5
TWI59G1390 Tripterygium wilfordii HOM05D007525 ORTHO05D003398 1.4e-13 80.9 136 32.4
PRCOL_00006625 Prasinoderma coloniale HOM05D007525 ORTHO05D003398 1.8e-13 80.5 128 30.5
TPR.G28291 Trifolium pratense HOM05D007525 ORTHO05D003398 2.3e-13 80.1 136 32.4
vmacro13241 Vaccinium macrocarpon HOM05D007525 ORTHO05D003398 2.3e-13 80.1 175 29.7
CSS0031135 Camellia sinensis var. sinensis HOM05D007525 ORTHO05D003398 3.1e-13 79.7 192 28.1
MCO13G637 Micromonas commoda HOM05D006905 ORTHO05D003398 3.1e-13 79.7 126 35.7
AUR62022606 Chenopodium quinoa HOM05D007525 ORTHO05D003398 8.9e-13 78.2 173 27.7
Sopen01g038780 Solanum pennellii HOM05D007525 ORTHO05D003398 8.9e-13 78.2 185 27.6
CAN.G78.117 Capsicum annuum HOM05D007525 ORTHO05D003398 1.2e-12 77.8 137 29.2
Duzib133G0712 Durio zibethinus HOM05D007525 ORTHO05D003398 1.2e-12 77.8 136 29.4
PGSC0003DMG400000187 Solanum tuberosum HOM05D007525 ORTHO05D003398 1.2e-12 77.8 176 27.3
MD01G1069500 Malus domestica HOM05D007525 ORTHO05D003398 1.5e-12 77.4 174 28.7
Peaxi162Scf00020g00126 Petunia axillaris HOM05D007525 ORTHO05D003398 1.5e-12 77.4 136 29.4
Sabra02G0147700 Salix brachista HOM05D007525 ORTHO05D003398 1.5e-12 77.4 194 24.7
ATR0661G217 Amborella trichopoda HOM05D007525 ORTHO05D003398 2.0e-12 77.0 140 30.0
Nitab4.5_0000915g0170 Nicotiana tabacum HOM05D007525 ORTHO05D003398 2.0e-12 77.0 175 26.9
Mapoly0011s0142 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.6e-12 76.6 136 33.1
Lj7A509T109 Lonicera japonica HOM05D007525 ORTHO05D003398 3.4e-12 76.3 136 29.4
SalBow5G0215 Salvia bowleyana HOM05D007525 ORTHO05D003398 3.4e-12 76.3 135 28.1
Solyc01g095000.3 Solanum lycopersicum HOM05D007525 ORTHO05D003398 3.4e-12 76.3 175 27.4
unitig_22.g6725 Utricularia gibba HOM05D007525 ORTHO05D003398 3.4e-12 76.3 203 27.1
Nitab4.5_0010703g0010 Nicotiana tabacum HOM05D007525 ORTHO05D003398 5.8e-12 75.5 175 28.0
ECA240G1228 Erigeron canadensis HOM05D007525 ORTHO05D003398 6.4e-11 72.0 136 28.7
Gohir.A07G140800 Gossypium hirsutum HOM05D007525 ORTHO05D003398 3.2e-10 69.7 135 28.9
Phvul.010G105000 Phaseolus vulgaris HOM05D007525 ORTHO05D003398 1.6e-09 67.4 167 28.1
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.0e-09 67.0 212 26.9
Haze_15550 Corylus avellana HOM05D007525 ORTHO05D003398 2.7e-09 66.6 199 26.6
MCO09G649 Micromonas commoda HOM05D006905 ORTHO05D003398 3.5e-09 66.2 131 29.8
AagrBONN_evm.TU.Sc2ySwM_228.1193 Anthoceros agrestis HOM05D007525 ORTHO05D003398 4.6e-09 65.9 95 31.6
Rhsim07G0011500 Rhododendron simsii HOM05D001943 ORTHO05D001969 4.6e-09 65.9 177 28.2
MCO06G228 Micromonas commoda HOM05D006905 ORTHO05D003398 1.0e-08 64.7 132 30.3
COL.COLO4_12762 Corchorus olitorius HOM05D007525 ORTHO05D003398 1.7e-08 63.9 171 26.3
Gohir.A01G104050 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.7e-08 63.9 63 47.6
Ah.06g192600 Amaranthus hybridus HOM05D002360 ORTHO05D003398 2.1e-06 57.0 66 45.5
Lalb_Chr15g0076101 Lupinus albus HOM05D002522 ORTHO05D002744 2.1e-06 57.0 228 25.4


User provided reference genes

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