Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 7.6e-127 457.2 236 100.0
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 5.3e-64 248.4 246 61.0
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 2.4e-48 196.4 251 52.2
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 1.1e-45 187.6 254 50.4
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 6.8e-43 178.3 292 45.2
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 6.8e-43 178.3 272 47.1
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 8.8e-43 177.9 194 57.2
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.1e-40 171.0 317 42.6
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.8e-40 170.2 316 42.7
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 4.1e-40 169.1 256 46.5
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.1e-40 169.1 291 45.0
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 5.4e-40 168.7 288 45.1
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 7.7e-39 164.9 295 44.7
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 1.0e-38 164.5 300 44.0
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 5.0e-38 162.2 317 41.6
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 8.6e-38 161.4 297 40.1
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.3e-37 159.5 297 42.4
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.3e-37 159.1 286 43.7
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 7.2e-37 158.3 320 40.0
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 1.2e-36 157.5 240 47.1
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 1.6e-36 157.1 275 42.2
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 2.8e-36 156.4 314 39.5
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.8e-36 156.4 315 44.1
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 3.6e-36 156.0 229 48.5
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 3.6e-36 156.0 241 47.3
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 1.8e-35 153.7 310 40.0
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 3.0e-35 152.9 299 44.5
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 3.0e-35 152.9 293 41.0
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 6.8e-35 151.8 268 43.7
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 1.2e-34 151.0 274 43.8
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 1.2e-34 151.0 305 41.0
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 1.5e-34 150.6 239 47.3
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 2.0e-34 150.2 272 43.4
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 4.4e-34 149.1 304 40.1
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 7.5e-34 148.3 295 40.7
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 7.5e-34 148.3 246 45.5
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.3e-33 147.5 250 40.8
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.7e-33 147.1 342 38.0
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.7e-33 147.1 276 40.9
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 2.2e-33 146.7 253 45.1
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 2.9e-33 146.4 287 41.1
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 3.7e-33 146.0 241 45.2
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 4.9e-33 145.6 264 43.2
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 8.3e-33 144.8 290 40.7
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.1e-32 144.4 289 41.2
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.4e-32 144.1 262 42.0
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 1.4e-32 144.1 295 42.0
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 1.8e-32 143.7 318 39.0
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 1.8e-32 143.7 321 38.6
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.4e-32 143.3 280 40.4
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 2.4e-32 143.3 307 39.4
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 3.2e-32 142.9 281 39.5
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 3.2e-32 142.9 283 40.6
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.2e-31 141.0 282 40.8
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 1.2e-31 141.0 245 43.3
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 2.0e-31 140.2 281 41.3
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 2.0e-31 140.2 229 46.7
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 4.6e-31 139.0 283 41.0
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 4.6e-31 139.0 233 44.6
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 4.6e-31 139.0 286 39.5
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 5.9e-31 138.7 263 42.6
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 5.9e-31 138.7 292 39.0
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.0e-30 137.9 319 39.2
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.0e-30 137.9 280 40.0
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.0e-30 137.9 304 37.2
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.7e-30 137.1 271 40.2
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.7e-30 137.1 308 38.6
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 2.3e-30 136.7 241 46.1
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 2.3e-30 136.7 291 39.5
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 3.0e-30 136.3 275 42.2
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 3.0e-30 136.3 243 44.0
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 5.0e-30 135.6 299 38.8
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 5.0e-30 135.6 244 43.4
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 5.0e-30 135.6 251 42.6
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.6e-30 135.2 238 43.7
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.5e-29 134.0 244 43.4
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.5e-29 134.0 271 39.5
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.9e-29 133.7 249 41.0
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 2.5e-29 133.3 298 37.9
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.3e-29 132.5 262 41.6
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 4.3e-29 132.5 245 43.3
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 5.6e-29 132.1 273 39.9
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 5.6e-29 132.1 251 41.0
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 7.3e-29 131.7 263 40.7
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 9.5e-29 131.3 240 41.7
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 1.2e-28 131.0 229 43.2
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.1e-28 130.2 313 37.7
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.1e-28 130.2 267 40.8
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 4.7e-28 129.0 210 44.3
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 4.7e-28 129.0 269 39.4
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 4.7e-28 129.0 272 37.1
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 6.2e-28 128.6 222 44.6
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 6.2e-28 128.6 235 43.8
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 8.0e-28 128.3 308 39.3
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 1.4e-27 127.5 264 42.0
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 1.8e-27 127.1 270 40.0
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.8e-27 127.1 236 42.4
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 2.3e-27 126.7 241 40.7
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.3e-27 126.7 296 36.8
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 3.1e-27 126.3 222 44.6
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 3.1e-27 126.3 217 44.2
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 4.0e-27 125.9 289 38.4
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 1.2e-26 124.4 223 45.3
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 1.2e-26 124.4 226 46.0
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 1.2e-26 124.4 160 52.5
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.5e-26 124.0 204 45.1
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.4e-26 122.9 226 42.0
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 5.8e-26 122.1 242 39.7
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 5.8e-26 122.1 209 43.1
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 9.8e-26 121.3 227 41.4
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 2.9e-25 119.8 294 36.1
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 6.4e-25 118.6 268 38.1
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 6.4e-25 118.6 295 35.9
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 2.4e-24 116.7 288 35.4
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 2.4e-24 116.7 235 38.7
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.4e-24 116.7 227 40.1
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.4e-24 116.7 292 35.6
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 3.2e-24 116.3 222 41.9
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.4e-24 115.5 252 38.5
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 5.4e-24 115.5 222 41.4
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 7.0e-24 115.2 238 42.9
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 9.2e-24 114.8 180 48.3
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 2.7e-23 113.2 240 38.8
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.7e-23 113.2 301 36.5
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.0e-23 112.1 235 40.4
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.8e-23 111.7 251 37.5
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.0e-22 111.3 226 38.5
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 1.0e-22 111.3 226 38.9
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.7e-22 110.5 237 40.1
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 5.0e-22 109.0 222 39.2
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 2.5e-21 106.7 175 44.0
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 7.3e-21 105.1 231 37.7
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 9.5e-21 104.8 167 44.3
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 1.6e-20 104.0 173 43.9
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.6e-20 104.0 214 39.3
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 3.6e-20 102.8 277 35.4
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 6.2e-20 102.1 257 35.4
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 6.2e-20 102.1 253 34.8
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.8e-19 100.5 216 38.4
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.5e-18 97.4 266 36.5
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 1.5e-18 97.4 233 35.2
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 2.0e-18 97.1 227 36.6
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 2.0e-18 97.1 262 35.5
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 2.6e-18 96.7 153 41.8
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 5.8e-18 95.5 136 44.1
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 9.8e-18 94.7 200 37.5
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.3e-17 94.4 215 40.9
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 3.7e-17 92.8 316 30.7
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 1.4e-16 90.9 197 40.6
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 1.4e-16 90.9 251 35.5
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 1.9e-16 90.5 142 47.2
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 1.9e-16 90.5 142 47.2
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 4.1e-16 89.4 223 39.5
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.1e-16 89.4 210 37.1
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 5.4e-16 89.0 251 34.7
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 2.1e-15 87.0 155 46.5
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 3.5e-15 86.3 115 52.2
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 3.0e-14 83.2 231 37.7
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 8.6e-14 81.6 230 36.1
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 2.5e-13 80.1 250 31.6
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 5.6e-13 79.0 240 32.5
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.2e-12 77.8 267 31.1
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.2e-12 77.8 267 31.1
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.6e-12 76.3 181 35.9
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 1.3e-09 67.8 119 42.9
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 2.2e-09 67.0 141 40.4
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 4.9e-09 65.9 181 37.0
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 4.9e-09 65.9 181 37.0
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 4.1e-08 62.8 278 27.7
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.0e-06 58.2 91 44.0
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 8.6e-06 55.1 233 28.8


User provided reference genes

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