Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 2.6e-250 869.0 739 100.0
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 7.5e-64 249.6 769 34.3
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 1.3e-36 159.1 266 39.1
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 7.6e-32 143.3 278 36.7
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 3.8e-31 141.0 734 24.3
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 6.4e-31 140.2 282 35.1
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.7e-28 132.1 282 34.0
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 3.0e-28 131.3 779 27.3
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 8.6e-28 129.8 755 26.8
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 2.5e-27 128.3 802 24.3
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 6.2e-26 123.6 781 24.1
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 2.4e-25 121.7 764 23.6
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 4.0e-25 120.9 256 34.0
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 5.8e-24 117.1 756 26.7
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 9.9e-24 116.3 257 32.7
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 1.7e-23 115.5 265 34.3
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 6.4e-23 113.6 737 27.0
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.4e-22 112.5 259 32.4
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 2.4e-22 111.7 283 30.7
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.2e-22 111.3 213 35.7
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 4.2e-22 110.9 231 35.5
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 1.6e-21 109.0 267 33.3
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 7.8e-21 106.7 262 37.4
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 6.6e-20 103.6 281 29.2
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 1.1e-19 102.8 219 35.2
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 1.1e-19 102.8 781 23.3
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.5e-19 102.4 263 28.9
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 2.5e-19 101.7 279 29.4
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 3.3e-19 101.3 258 30.6
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 4.3e-19 100.9 750 27.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 5.6e-19 100.5 240 33.3
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 9.6e-19 99.8 232 35.8
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 2.1e-18 98.6 734 22.9
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 2.1e-18 98.6 192 34.9
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 6.2e-18 97.1 758 28.4
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.1e-17 96.3 206 33.0
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 1.4e-17 95.9 267 30.0
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 3.1e-17 94.7 206 32.5
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 3.1e-17 94.7 210 31.4
Lsat_1_v5_gn_4_137721 Lactuca sativa HOM05D004923 ORTHO05D005940 4.0e-17 94.4 260 36.5
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 6.9e-17 93.6 266 37.2
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 2.0e-16 92.0 210 31.9
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 2.0e-16 92.0 737 30.7
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 3.4e-16 91.3 262 35.1
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 3.4e-16 91.3 280 26.8
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.5e-16 90.9 258 29.8
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 5.8e-16 90.5 251 32.3
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 1.3e-15 89.4 206 30.6
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 1.7e-15 89.0 253 36.8
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 2.2e-15 88.6 281 30.6
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.9e-15 88.2 756 28.2
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 3.8e-15 87.8 739 24.5
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 3.8e-15 87.8 229 31.0
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 6.4e-15 87.0 234 30.3
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 8.4e-15 86.7 135 40.0
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.1e-14 86.3 234 30.3
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.4e-14 85.9 265 31.7
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 1.9e-14 85.5 145 36.6
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.4e-14 85.1 125 41.6
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 3.2e-14 84.7 135 41.5
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 4.2e-14 84.3 242 31.0
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 7.1e-14 83.6 286 28.3
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.2e-13 82.8 728 28.7
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 1.2e-13 82.8 142 39.4
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 1.6e-13 82.4 206 31.6
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 2.1e-13 82.0 144 37.5
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 2.1e-13 82.0 211 27.0
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 2.1e-13 82.0 215 33.5
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 1.0e-12 79.7 259 31.3
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 2.3e-12 78.6 770 20.9
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 1.5e-11 75.9 244 32.0
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 1.5e-11 75.9 154 37.0
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 1.9e-11 75.5 145 36.6
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 2.5e-11 75.1 108 41.7
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 4.3e-11 74.3 70 55.7
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 5.6e-11 73.9 260 32.7
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 7.4e-11 73.6 279 26.9
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 9.6e-11 73.2 283 25.8
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.3e-10 72.8 243 28.8
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 2.1e-10 72.0 743 23.6
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 3.6e-10 71.2 267 27.3
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 6.2e-10 70.5 279 26.5
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 1.1e-09 69.7 267 26.6
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 1.1e-09 69.7 267 26.6
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 1.4e-09 69.3 214 32.7
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.8e-09 68.9 145 31.7
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 1.8e-09 68.9 198 32.8
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 2.4e-09 68.6 285 24.6
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 2.4e-09 68.6 219 31.1
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.4e-09 68.6 145 31.0
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 3.1e-09 68.2 134 36.6
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 3.1e-09 68.2 135 39.3
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 4.0e-09 67.8 154 32.5
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 5.3e-09 67.4 145 31.0
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 9.0e-09 66.6 216 31.9
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 1.5e-08 65.9 738 22.8
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 1.5e-08 65.9 214 32.2
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.0e-08 65.5 206 36.9
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 2.6e-08 65.1 135 34.1
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 3.4e-08 64.7 127 37.8
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 3.4e-08 64.7 250 29.2
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 3.4e-08 64.7 146 32.2
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 4.5e-08 64.3 198 30.8
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 4.5e-08 64.3 146 41.8
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 5.8e-08 63.9 199 28.1
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 5.8e-08 63.9 199 28.1
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 7.6e-08 63.5 215 36.3
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 7.6e-08 63.5 765 31.1
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 9.9e-08 63.2 252 25.4
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 9.9e-08 63.2 265 24.9
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 2.2e-07 62.0 735 21.2
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 8.4e-07 60.1 266 28.2
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.1e-06 59.7 214 36.0
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.1e-06 59.7 279 30.1
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.1e-06 59.7 294 27.2
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 2.4e-06 58.5 159 32.1
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 4.2e-06 57.8 261 30.7
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 7.1e-06 57.0 154 33.1


User provided reference genes

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