Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 4.5e-43 177.6 91 100.0
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 7.6e-35 150.2 86 83.7
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.3e-34 149.4 82 86.6
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.7e-34 149.1 84 82.1
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 4.9e-34 147.5 86 81.4
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 8.4e-34 146.7 87 82.8
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 8.4e-34 146.7 83 83.1
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.4e-33 146.0 86 80.2
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.4e-33 146.0 84 82.1
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.9e-33 145.6 86 80.2
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.4e-33 145.2 84 81.0
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.4e-33 145.2 83 83.1
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.4e-33 145.2 86 81.4
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.4e-33 145.2 86 80.2
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.2e-33 144.4 90 78.9
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 7.1e-33 143.7 82 82.9
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 9.3e-33 143.3 88 83.0
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 9.3e-33 143.3 77 84.4
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.2e-32 142.9 84 81.0
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.2e-32 142.9 83 79.5
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.2e-32 142.9 83 80.7
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.1e-32 142.1 81 82.7
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.1e-32 142.1 85 77.6
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.7e-32 141.7 83 79.5
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 3.5e-32 141.4 84 81.0
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 4.6e-32 141.0 83 78.3
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 6.0e-32 140.6 79 84.8
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 6.0e-32 140.6 88 70.5
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 6.0e-32 140.6 79 84.8
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 7.9e-32 140.2 84 79.8
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 7.9e-32 140.2 86 75.6
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 7.9e-32 140.2 79 84.8
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 76.7
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 76.7
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 75.6
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.0e-31 139.8 79 83.5
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 77.9
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 77.9
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.0e-31 139.8 85 77.6
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.3e-31 139.4 86 80.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.8e-31 139.0 81 81.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.3e-31 138.7 79 83.5
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.3e-31 138.7 79 83.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.3e-31 138.7 79 83.5
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.3e-31 138.7 81 80.2
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 3.0e-31 138.3 84 75.0
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 3.0e-31 138.3 82 80.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.0e-31 138.3 84 76.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 3.0e-31 138.3 85 76.5
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 3.9e-31 137.9 83 77.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 3.9e-31 137.9 79 83.5
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.1e-31 137.5 84 76.2
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.1e-31 137.5 83 77.1
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 5.1e-31 137.5 82 79.3
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 6.7e-31 137.1 81 79.0
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 8.7e-31 136.7 90 73.3
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 8.7e-31 136.7 88 71.6
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.1e-30 136.3 79 82.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.1e-30 136.3 85 75.3
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.5e-30 136.0 87 70.1
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.5e-30 136.0 87 70.1
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.5e-30 136.0 87 70.1
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.5e-30 136.0 80 78.8
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.5e-30 136.0 86 74.4
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.9e-30 135.6 82 74.4
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 2.5e-30 135.2 85 74.1
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 3.3e-30 134.8 82 73.2
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 3.3e-30 134.8 82 73.2
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 3.3e-30 134.8 82 73.2
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 3.3e-30 134.8 81 77.8
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.3e-30 134.4 88 69.3
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 5.6e-30 134.0 94 67.0
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 5.6e-30 134.0 84 71.4
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 7.4e-30 133.7 76 82.9
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 9.6e-30 133.3 84 72.6
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 9.6e-30 133.3 83 78.3
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 9.6e-30 133.3 85 71.8
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.3e-29 132.9 88 69.3
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.3e-29 132.9 82 73.2
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.6e-29 132.5 98 69.4
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.6e-29 132.5 81 77.8
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-29 131.7 82 73.2
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 4.8e-29 131.0 86 72.1
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.8e-29 131.0 85 71.8
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 8.2e-29 130.2 82 72.0
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 8.2e-29 130.2 82 75.6
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.2e-29 130.2 82 75.6
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 129.8 82 72.0
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 129.8 82 72.0
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-28 129.8 82 72.0
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.1e-28 129.8 82 72.0
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.8e-28 129.0 78 74.4
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.4e-28 128.6 103 63.1
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 2.4e-28 128.6 82 74.4
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 3.1e-28 128.3 82 70.7
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 5.3e-28 127.5 83 71.1
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 5.3e-28 127.5 96 66.7
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.4e-27 124.8 82 73.2
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 4.5e-27 124.4 111 59.5
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 4.5e-27 124.4 72 79.2
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.3e-26 122.9 78 73.1
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.2e-26 122.1 70 85.7
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.2e-26 122.1 90 68.9
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.9e-26 121.7 69 85.5
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.8e-26 121.3 83 68.7
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 4.9e-26 120.9 67 86.6
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 6.5e-26 120.6 72 80.6
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.1e-25 119.8 64 90.6
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.5e-25 118.6 67 88.1
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 3.2e-25 118.2 71 85.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 4.2e-25 117.9 78 76.9
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.2e-25 117.9 70 80.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 4.2e-25 117.9 70 78.6
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.5e-24 114.8 83 65.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.3e-23 112.8 70 77.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 2.3e-23 112.1 66 77.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 3.0e-23 111.7 70 71.4
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 5.3e-20 100.9 69 68.1
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 9.0e-20 100.1 78 60.3
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 6.5e-18 94.0 79 63.3
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 6.1e-16 87.4 85 54.1
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.0e-15 86.7 73 60.3
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 8.8e-15 83.6 55 74.5
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 4.3e-14 81.3 47 78.7
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 7.4e-14 80.5 69 53.6
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.5e-11 72.8 66 53.0
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 5.9e-11 70.9 68 55.9
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 5.0e-10 67.8 51 60.8
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 4.7e-08 61.2 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 4.7e-08 61.2 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 4.7e-08 61.2 48 60.4


User provided reference genes

Program Settings