Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 8.4e-163 577.0 305 100.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 5.4e-125 451.4 305 80.7
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 9.8e-119 430.6 319 74.3
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.3e-82 309.3 255 66.7
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.6e-81 305.8 310 56.8
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.4e-80 303.9 307 57.7
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.1e-80 302.8 313 56.2
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.6e-79 299.7 257 61.5
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.4e-79 299.3 241 65.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.7e-78 297.0 241 66.8
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.8e-78 295.8 251 65.3
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 8.4e-78 294.7 305 55.1
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.1e-77 294.3 305 55.1
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.4e-77 293.9 240 63.8
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.4e-77 293.1 288 59.4
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.2e-76 290.8 241 65.6
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.7e-76 289.7 239 64.0
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.7e-76 289.7 212 70.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.5e-76 289.3 243 65.8
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.6e-76 288.9 281 60.5
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.0e-75 287.7 288 58.7
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.7e-75 287.0 237 64.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 5.1e-75 285.4 253 62.8
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.1e-74 284.3 266 60.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.5e-74 283.9 291 58.4
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 4.3e-74 282.3 223 67.7
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 5.6e-74 282.0 225 66.2
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 5.6e-74 282.0 217 69.6
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 7.3e-74 281.6 286 57.3
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.8e-73 279.6 266 59.8
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.8e-73 279.6 248 61.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 3.6e-73 279.3 212 69.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 4.8e-73 278.9 218 67.0
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 8.1e-73 278.1 249 62.2
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 8.1e-73 278.1 390 49.5
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 8.1e-73 278.1 250 60.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-72 277.7 237 63.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.1e-72 277.7 267 59.6
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.8e-72 276.9 241 63.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 2.4e-72 276.6 266 59.0
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 4.0e-72 275.8 226 65.0
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.0e-72 275.8 242 63.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.3e-72 275.4 237 62.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 9.0e-72 274.6 280 57.9
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.5e-71 273.9 271 57.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 2.0e-71 273.5 225 64.4
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.0e-71 273.5 249 59.8
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.6e-71 273.1 241 61.4
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.6e-71 273.1 227 66.5
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 3.4e-71 272.7 276 59.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 9.9e-71 271.2 264 57.6
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.7e-70 270.4 227 63.9
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.7e-70 270.4 262 58.8
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 4.9e-70 268.9 290 52.8
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 6.4e-70 268.5 275 56.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.1e-69 267.7 239 61.9
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.4e-69 266.5 289 55.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 3.2e-69 266.2 262 58.4
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 3.0e-67 259.6 249 58.2
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.9e-67 259.2 293 54.3
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.1e-66 257.7 257 56.4
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.9e-66 256.9 223 60.5
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.5e-66 256.5 304 51.6
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 5.6e-66 255.4 304 51.6
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.7e-65 252.7 193 68.9
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.1e-65 251.5 304 51.6
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.1e-64 251.1 268 54.5
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.4e-64 250.8 268 54.5
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.0e-64 249.2 218 62.8
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.0e-64 249.2 218 62.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 6.9e-64 248.4 236 58.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 2.6e-63 246.5 269 54.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 3.4e-63 246.1 207 62.8
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 7.6e-63 245.0 214 62.6
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 9.9e-63 244.6 252 55.2
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.8e-62 242.7 283 52.3
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 4.9e-62 242.3 218 61.9
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 6.4e-62 241.9 175 70.9
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.4e-61 240.0 289 51.6
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 5.5e-61 238.8 238 55.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.1e-61 238.4 222 61.3
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.6e-60 237.3 295 49.2
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.1e-60 236.9 261 54.4
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 2.7e-60 236.5 235 53.2
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.6e-60 235.7 290 51.7
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.0e-59 234.6 282 50.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.0e-59 234.6 202 63.9
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.3e-59 233.4 189 66.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.9e-59 232.6 254 56.3
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.4e-58 228.4 248 54.0
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.8e-57 226.5 266 49.6
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.8e-57 226.5 266 49.6
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.8e-57 226.5 202 57.4
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.4e-56 223.4 266 50.4
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 6.0e-52 208.8 176 66.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.9e-51 206.1 184 62.5
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.1e-48 196.4 225 52.0
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 6.9e-48 195.3 213 54.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 9.0e-48 194.9 147 68.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.9e-46 189.9 152 65.8
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 7.9e-44 181.8 136 68.4
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.8e-41 173.3 144 63.9
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 5.9e-39 165.6 258 44.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 7.7e-39 165.2 211 42.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 5.5e-37 159.1 237 46.8
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.2e-37 158.7 142 57.7
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 2.1e-36 157.1 175 53.1
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.4e-35 154.5 191 49.7
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 3.0e-35 153.3 253 43.1
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.0e-34 150.6 125 64.0
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.3e-33 147.9 187 43.9
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 7.2e-29 132.1 110 64.5
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 7.4e-26 122.1 116 56.9
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.2e-23 114.8 187 39.0
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.2e-23 114.8 109 58.7
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.6e-18 97.1 176 32.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.6e-18 97.1 189 36.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 9.1e-16 88.6 69 71.0
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 6.5e-14 82.4 78 56.4
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 3.0e-11 73.6 93 47.3
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.2e-07 61.6 53 54.7
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.9e-06 57.0 48 64.6


User provided reference genes

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