Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 2.9e-51 204.9 101 100.0
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 3.2e-50 201.4 100 97.0
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 5.5e-50 200.7 101 97.0
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.2e-49 199.5 100 96.0
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.2e-49 199.5 100 96.0
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 6.0e-49 197.2 101 94.1
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 7.9e-49 196.8 100 95.0
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 1.3e-48 196.1 100 93.0
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 1.8e-48 195.7 100 93.0
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 1.8e-48 195.7 101 93.1
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 2.3e-48 195.3 101 93.1
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 2.3e-48 195.3 100 93.0
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 2.3e-48 195.3 100 92.0
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 2.3e-48 195.3 99 94.9
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 2.3e-48 195.3 101 93.1
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 3.0e-48 194.9 97 97.9
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 3.9e-48 194.5 101 92.1
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 6.7e-48 193.7 100 91.0
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 6.7e-48 193.7 101 92.1
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 8.7e-48 193.4 100 91.0
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 8.7e-48 193.4 100 92.0
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.5e-47 192.6 101 91.1
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 1.5e-47 192.6 100 90.0
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 1.5e-47 192.6 99 93.9
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 2.5e-47 191.8 101 91.1
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 2.5e-47 191.8 100 90.0
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 2.5e-47 191.8 101 90.1
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 3.3e-47 191.4 100 92.0
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 3.3e-47 191.4 101 92.1
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 4.3e-47 191.0 101 91.1
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 7.4e-47 190.3 101 90.1
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 9.6e-47 189.9 100 91.0
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 9.6e-47 189.9 100 91.0
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 1.3e-46 189.5 99 91.9
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 1.3e-46 189.5 101 89.1
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 1.6e-46 189.1 100 91.0
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 1.6e-46 189.1 99 91.9
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 1.6e-46 189.1 100 88.0
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 2.1e-46 188.7 100 88.0
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 2.1e-46 188.7 100 90.0
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 3.7e-46 188.0 101 88.1
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 4.8e-46 187.6 100 89.0
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 4.8e-46 187.6 100 89.0
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 4.8e-46 187.6 101 89.1
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 4.8e-46 187.6 101 90.1
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 6.2e-46 187.2 100 87.0
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 8.1e-46 186.8 99 89.9
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 8.1e-46 186.8 100 89.0
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 1.1e-45 186.4 100 89.0
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 1.1e-45 186.4 100 89.0
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 1.4e-45 186.0 100 88.0
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 1.4e-45 186.0 100 90.0
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 1.8e-45 185.7 100 87.0
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 1.8e-45 185.7 100 88.0
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 2.4e-45 185.3 101 86.1
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 2.4e-45 185.3 100 88.0
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 2.4e-45 185.3 100 88.0
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 3.1e-45 184.9 101 87.1
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 3.1e-45 184.9 101 90.1
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 3.1e-45 184.9 100 87.0
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 4.0e-45 184.5 101 86.1
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 4.0e-45 184.5 100 87.0
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 5.3e-45 184.1 101 88.1
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 5.3e-45 184.1 100 85.0
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 5.3e-45 184.1 100 85.0
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 6.9e-45 183.7 101 86.1
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 6.9e-45 183.7 101 87.1
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 6.9e-45 183.7 101 86.1
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 1.2e-44 183.0 100 86.0
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 1.2e-44 183.0 101 86.1
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 1.2e-44 183.0 99 87.9
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 2.0e-44 182.2 101 87.1
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 2.0e-44 182.2 100 86.0
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 2.0e-44 182.2 100 86.0
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 2.6e-44 181.8 101 85.1
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 4.5e-44 181.0 100 85.0
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 7.6e-44 180.3 100 84.0
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 7.6e-44 180.3 101 85.1
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 1.0e-43 179.9 100 85.0
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 1.0e-43 179.9 100 85.0
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.0e-43 179.9 100 84.0
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 83.0
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 83.0
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 83.0
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 83.0
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 83.0
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 1.7e-43 179.1 95 89.5
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 84.0
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.7e-43 179.1 94 89.4
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.7e-43 179.1 94 89.4
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 2.9e-43 178.3 100 84.0
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 4.9e-43 177.6 100 83.0
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 4.9e-43 177.6 97 88.7
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 6.5e-43 177.2 100 82.0
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 6.5e-43 177.2 100 85.0
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 8.4e-43 176.8 100 84.0
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.1e-42 176.4 100 83.0
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 1.1e-42 176.4 95 87.4
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 1.1e-42 176.4 100 84.0
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 1.9e-42 175.6 99 81.8
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 3.2e-42 174.9 100 81.0
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 3.2e-42 174.9 101 84.2
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 4.2e-42 174.5 96 84.4
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 4.2e-42 174.5 96 84.4
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 4.2e-42 174.5 96 84.4
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 4.2e-42 174.5 96 84.4
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 5.5e-42 174.1 94 87.2
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 9.3e-42 173.3 94 86.2
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 9.3e-42 173.3 99 81.8
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 2.1e-41 172.2 95 85.3
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 3.0e-40 168.3 97 86.6
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 3.9e-40 167.9 124 67.7
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 4.6e-33 144.4 101 75.2
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 8.7e-32 140.2 100 71.0
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 6.9e-29 130.6 78 78.2
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 8.5e-27 123.6 92 66.3
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 6.1e-25 117.5 92 59.8
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 6.1e-25 117.5 92 60.9
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 7.4e-23 110.5 90 56.7
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 1.8e-21 105.9 90 54.4
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 3.1e-21 105.1 90 55.6
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 7.7e-20 100.5 59 78.0
Medtr2g097750 Medicago truncatula HOM05D005994 ORTHO05D007322 1.7e-19 99.4 59 81.4
Nn5g27130 Nelumbo nucifera HOM05D005994 ORTHO05D007322 2.9e-19 98.6 52 90.4
TAR626G0394 Trochodendron aralioides HOM05D005994 ORTHO05D007322 2.9e-19 98.6 51 92.2
Dinv10313 Davidia involucrata HOM05D005994 ORTHO05D007322 1.9e-18 95.9 94 60.6
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 5.5e-18 94.4 87 54.0
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 2.1e-17 92.4 97 55.7
Nitab4.5_0005540g0030 Nicotiana tabacum HOM05D005994 ORTHO05D007322 3.6e-17 91.7 52 88.5
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 6.1e-17 90.9 51 86.3
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 2.6e-15 85.5 87 48.3
Zm00001eb041720 Zea mays HOM05D005994 ORTHO05D007322 1.6e-12 76.3 55 65.5
TAR627G0003 Trochodendron aralioides HOM05D005994 ORTHO05D007322 1.5e-10 69.7 43 79.1


User provided reference genes

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