Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1107 Erigeron canadensis HOM05D002966 ORTHO05D003274 3.1e-40 167.9 80 100.0
Sabra16G0319400 Salix brachista HOM05D002966 ORTHO05D003274 3.6e-12 74.7 49 73.5
Ciclev10009431m.g Citrus clementina HOM05D002966 ORTHO05D003274 4.7e-12 74.3 54 72.2
Atru.chr2.3783 Acer truncatum HOM05D002966 ORTHO05D003274 6.1e-12 73.9 49 73.5
Cc05_g15590 Coffea canephora HOM05D002966 ORTHO05D003274 6.1e-12 73.9 49 73.5
HanXRQChr14g0431341 Helianthus annuus HOM05D002966 ORTHO05D003274 8.0e-12 73.6 49 69.4
Potri.001G470800 Populus trichocarpa HOM05D002966 ORTHO05D003274 8.0e-12 73.6 49 71.4
Duzib213G0028 Durio zibethinus HOM05D002966 ORTHO05D003274 1.4e-11 72.8 49 71.4
Lj6g0000831 Lotus japonicus HOM05D002966 ORTHO05D003274 1.4e-11 72.8 49 69.4
Prupe.6G033100 Prunus persica HOM05D002966 ORTHO05D003274 1.4e-11 72.8 49 71.4
Potri.011G167900 Populus trichocarpa HOM05D002966 ORTHO05D003274 1.8e-11 72.4 49 71.4
Phvul.006G061800 Phaseolus vulgaris HOM05D002966 ORTHO05D003274 2.3e-11 72.0 49 69.4
VMungo0540G2097 Vigna mungo HOM05D002966 ORTHO05D003274 2.3e-11 72.0 49 67.3
Manes.05G205500 Manihot esculenta HOM05D002966 ORTHO05D003274 3.0e-11 71.6 49 67.3
CiPaw.12G142200 Carya illinoinensis HOM05D002966 ORTHO05D003274 4.0e-11 71.2 49 69.4
Manes.01G005512 Manihot esculenta HOM05D002966 ORTHO05D003274 4.0e-11 71.2 49 69.4
Oeu013012.1 Olea europaea HOM05D002966 ORTHO05D003274 4.0e-11 71.2 49 73.5
Ca_14869_v3 Cicer arietinum L. HOM05D002966 ORTHO05D003274 5.2e-11 70.9 49 69.4
COL.COLO4_07779 Corchorus olitorius HOM05D002966 ORTHO05D003274 5.2e-11 70.9 52 69.2
Rhsim06G0234400 Rhododendron simsii HOM05D002966 ORTHO05D003274 5.2e-11 70.9 49 71.4
TWI38G1586 Tripterygium wilfordii HOM05D002966 ORTHO05D003274 5.2e-11 70.9 49 67.3
Haze_09906 Corylus avellana HOM05D002966 ORTHO05D003274 6.7e-11 70.5 49 67.3
Dinv40901 Davidia involucrata HOM05D002966 ORTHO05D003274 6.7e-11 70.5 49 71.4
Thecc.07G003000 Theobroma cacao HOM05D002966 ORTHO05D003274 8.8e-11 70.1 49 67.3
Lsat_1_v5_gn_7_116241 Lactuca sativa HOM05D002966 ORTHO05D003274 1.1e-10 69.7 49 65.3
RcHm_v2.0_Chr5g0074881 Rosa chinensis HOM05D002966 ORTHO05D003274 1.5e-10 69.3 49 67.3
THA.LOC104811695 Tarenaya hassleriana HOM05D002966 ORTHO05D003274 1.5e-10 69.3 50 66.0
TWI38G2168 Tripterygium wilfordii HOM05D002966 ORTHO05D003274 1.5e-10 69.3 49 63.3
FvH4_3g41800 Fragaria vesca HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 65.3
FAN11G0932 Fragaria x ananassa HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 65.3
FAN16G1675 Fragaria x ananassa HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 65.3
FAN25G0015 Fragaria x ananassa HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 65.3
Gohir.A04G001800 Gossypium hirsutum HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 69.4
Gohir.D05G387600 Gossypium hirsutum HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 69.4
Gorai.009G454200 Gossypium raimondii HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 69.4
SalBow8G4530 Salvia bowleyana HOM05D002966 ORTHO05D003274 2.0e-10 68.9 49 67.3
Dinv19651 Davidia involucrata HOM05D002966 ORTHO05D003274 3.3e-10 68.2 49 67.3
QL08p000737 Quercus lobata HOM05D002966 ORTHO05D003274 3.3e-10 68.2 49 65.3
TAR627G0527 Trochodendron aralioides HOM05D002966 ORTHO05D003274 3.3e-10 68.2 49 67.3
FAN21G2136 Fragaria x ananassa HOM05D002966 ORTHO05D003274 5.7e-10 67.4 49 65.3
TPR.G14730 Trifolium pratense HOM05D002966 ORTHO05D003274 5.7e-10 67.4 52 65.4
Hma1.2p1_0321F.1_g124220 Hydrangea macrophylla HOM05D002966 ORTHO05D003274 7.5e-10 67.0 49 69.4
Glyma.08G336300 Glycine max HOM05D002966 ORTHO05D003274 9.7e-10 66.6 52 63.5
Psat5g164040 Pisum sativum HOM05D002966 ORTHO05D003274 9.7e-10 66.6 50 68.0
PGR083G0197 Punica granatum HOM05D002966 ORTHO05D003274 9.7e-10 66.6 49 67.3
Glyma.18G071400 Glycine max HOM05D002966 ORTHO05D003274 1.7e-09 65.9 47 61.7
CSS0042760 Camellia sinensis var. sinensis HOM05D002966 ORTHO05D003274 2.2e-09 65.5 49 63.3
CSS0049951 Camellia sinensis var. sinensis HOM05D002966 ORTHO05D003274 2.2e-09 65.5 49 63.3
Eucgr.F02000 Eucalyptus grandis HOM05D002966 ORTHO05D003274 2.8e-09 65.1 49 67.3
Thhalv10014555m.g Eutrema salsugineum HOM05D002966 ORTHO05D003274 2.8e-09 65.1 50 62.0
HanXRQChr05g0160161 Helianthus annuus HOM05D002966 ORTHO05D003274 2.8e-09 65.1 49 65.3
Solyc07g066040.1 Solanum lycopersicum HOM05D002966 ORTHO05D003274 2.8e-09 65.1 49 65.3
Sopen07g034230 Solanum pennellii HOM05D002966 ORTHO05D003274 2.8e-09 65.1 49 65.3
AL8G31750 Arabidopsis lyrata HOM05D002966 ORTHO05D003274 3.7e-09 64.7 50 62.0
AT5G56120 Arabidopsis thaliana HOM05D002966 ORTHO05D003274 3.7e-09 64.7 50 62.0
Carub.0008s1644 Capsella rubella HOM05D002966 ORTHO05D003274 3.7e-09 64.7 50 62.0
CARHR269500 Cardamine hirsuta HOM05D002966 ORTHO05D003274 3.7e-09 64.7 50 62.0
Lj8P182T56 Lonicera japonica HOM05D002966 ORTHO05D003274 3.7e-09 64.7 49 65.3
Nitab4.5_0001303g0030 Nicotiana tabacum HOM05D002966 ORTHO05D003274 4.8e-09 64.3 49 63.3
Sabra11G0138600 Salix brachista HOM05D002966 ORTHO05D003274 4.8e-09 64.3 47 68.1
MSTRG.15825 Avicennia marina HOM05D002966 ORTHO05D003274 6.3e-09 63.9 49 59.2
Cpa.g.sc12.79 Carica papaya HOM05D002966 ORTHO05D003274 6.3e-09 63.9 49 65.3
PGSC0003DMG400046514 Solanum tuberosum HOM05D002966 ORTHO05D003274 6.3e-09 63.9 49 63.3
HPP92_017987 Vanilla planifolia HOM05D002966 ORTHO05D003274 6.3e-09 63.9 49 61.2
ATR0053G034 Amborella trichopoda HOM05D002966 ORTHO05D003274 8.2e-09 63.5 56 58.9
Sp6g17970 Schrenkiella parvula HOM05D002966 ORTHO05D003274 8.2e-09 63.5 50 62.0
Migut.M01590 Erythranthe guttata HOM05D002966 ORTHO05D003274 1.1e-08 63.2 50 66.0
CsaV3_3G004370 Cucumis sativus L. HOM05D002966 ORTHO05D003274 1.4e-08 62.8 50 62.0
Aa31LG3G12030 Aethionema arabicum HOM05D002966 ORTHO05D003274 1.8e-08 62.4 50 62.0
Medtr3g461540 Medicago truncatula HOM05D002966 ORTHO05D003274 1.8e-08 62.4 50 64.0
PSO541G5304 Papaver somniferum HOM05D002966 ORTHO05D003274 1.8e-08 62.4 51 62.7
PSO675G7699 Papaver somniferum HOM05D002966 ORTHO05D003274 1.8e-08 62.4 51 62.7
CAN.G623.65 Capsicum annuum HOM05D002966 ORTHO05D003274 2.4e-08 62.0 49 61.2
ClCG10G004550 Citrullus lanatus HOM05D002966 ORTHO05D003274 2.4e-08 62.0 50 60.0
BcaB08g35977 Brassica carinata HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
BcaC04g20140 Brassica carinata HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
A10p13340 Brassica napus HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
C09p47270 Brassica napus HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
BolC9t57584H Brassica oleracea HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
BraA10t43435Z Brassica rapa HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
MELO3C014130.2 Cucumis melo HOM05D002966 ORTHO05D003274 3.1e-08 61.6 50 60.0
MBI14_g12725_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 4.1e-08 61.2 49 63.3
MBI14_g43562_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 4.1e-08 61.2 49 63.3
arahy.Tifrunner.gnm1.ann1.2YA2DE Arachis hypogaea HOM05D002966 ORTHO05D003274 5.3e-08 60.8 52 61.5
arahy.Tifrunner.gnm1.ann1.E7G0ZI Arachis hypogaea HOM05D002966 ORTHO05D003274 5.3e-08 60.8 52 61.5
Sed0011072 Sechium edule HOM05D002966 ORTHO05D003274 5.3e-08 60.8 50 58.0
PSO478G3370 Papaver somniferum HOM05D002966 ORTHO05D003274 1.2e-07 59.7 52 57.7
SGA_v2.0_scaffold186G40235 Striga asiatica HOM05D002966 ORTHO05D003274 1.2e-07 59.7 50 62.0
MBI15_g37117_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 1.0e-06 56.6 49 59.2
Sed0019904 Sechium edule HOM05D002966 ORTHO05D003274 1.0e-06 56.6 50 54.0
Os08g0496600 Oryza sativa ssp. japonica HOM05D002966 ORTHO05D003274 1.7e-06 55.8 42 61.9
CANSAT11G1295 Cannabis sativa HOM05D002966 ORTHO05D003274 2.2e-06 55.5 49 57.1


User provided reference genes

Program Settings