Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0990 Erigeron canadensis HOM05D000914 ORTHO05D000718 2.9e-51 204.9 101 100.0
ECA247G2288 Erigeron canadensis HOM05D002351 ORTHO05D002501 7.2e-10 67.4 56 64.3
ECA247G3021 Erigeron canadensis HOM05D000914 ORTHO05D000718 1.6e-09 66.2 56 62.5
ECA247G1392 Erigeron canadensis HOM05D000914 ORTHO05D000718 3.6e-09 65.1 50 62.0
Lj5g0012538 Lotus japonicus HOM05D000914 ORTHO05D000718 6.7e-08 60.8 48 54.2
ECA232G4396 Erigeron canadensis HOM05D000914 ORTHO05D000718 8.8e-08 60.5 30 86.7
BcaB08g36672 Brassica carinata HOM05D000914 ORTHO05D000718 1.5e-07 59.7 32 78.1
ECA236G3747 Erigeron canadensis HOM05D000914 ORTHO05D000718 1.5e-07 59.7 30 83.3
Lsat_1_v5_gn_8_90920 Lactuca sativa HOM05D000914 ORTHO05D000718 1.5e-07 59.7 41 58.5
CAN.G694.7 Capsicum annuum HOM05D000914 ORTHO05D000718 2.0e-07 59.3 40 65.0
Lj1C74T1 Lonicera japonica HOM05D000914 ORTHO05D000718 2.0e-07 59.3 48 54.2
Aa31LG11G11110 Aethionema arabicum HOM05D000914 ORTHO05D000718 2.6e-07 58.9 42 59.5
arahy.Tifrunner.gnm1.ann1.06I94X Arachis hypogaea HOM05D000914 ORTHO05D000718 3.3e-07 58.5 75 45.3
arahy.Tifrunner.gnm1.ann1.X646PN Arachis hypogaea HOM05D000914 ORTHO05D000718 3.3e-07 58.5 75 45.3
ECA236G1246 Erigeron canadensis HOM05D000914 ORTHO05D000718 3.3e-07 58.5 41 58.5
TAR362G1260 Trochodendron aralioides HOM05D000914 ORTHO05D000718 3.3e-07 58.5 48 52.1
Atru.chr5.1856 Acer truncatum HOM05D000914 ORTHO05D000718 4.4e-07 58.2 38 65.8
Aa31LG5G14800 Aethionema arabicum HOM05D000914 ORTHO05D000718 4.4e-07 58.2 35 68.6
ECA236G2198 Erigeron canadensis HOM05D000914 ORTHO05D000718 4.4e-07 58.2 30 80.0
PSO478G3998 Papaver somniferum HOM05D000914 ORTHO05D000718 4.4e-07 58.2 69 49.3
Sopen05g034310 Solanum pennellii HOM05D000914 ORTHO05D000718 4.4e-07 58.2 78 43.6
TPR.G26648 Trifolium pratense HOM05D000914 ORTHO05D000718 4.4e-07 58.2 48 52.1
GSVIVG01028430001 Vitis vinifera HOM05D000914 ORTHO05D000718 4.4e-07 58.2 48 50.0
ATR0787G092 Amborella trichopoda HOM05D000914 ORTHO05D000718 5.7e-07 57.8 48 52.1
A10p21070 Brassica napus HOM05D000914 ORTHO05D000718 5.7e-07 57.8 32 75.0
BraA10t44172Z Brassica rapa HOM05D000914 ORTHO05D000718 5.7e-07 57.8 32 75.0
CSS0010280 Camellia sinensis var. sinensis HOM05D000914 ORTHO05D000718 5.7e-07 57.8 48 50.0
CSS0022863 Camellia sinensis var. sinensis HOM05D000914 ORTHO05D000718 5.7e-07 57.8 48 50.0
CiPaw.03G270800 Carya illinoinensis HOM05D000914 ORTHO05D000718 5.7e-07 57.8 48 50.0
Dinv34677 Davidia involucrata HOM05D000914 ORTHO05D000718 5.7e-07 57.8 40 60.0
Medtr1g080370 Medicago truncatula HOM05D000914 ORTHO05D000718 5.7e-07 57.8 48 54.2
Medtr1g080410 Medicago truncatula HOM05D000914 ORTHO05D000718 5.7e-07 57.8 48 54.2
Nitab4.5_0000061g0070 Nicotiana tabacum HOM05D000914 ORTHO05D000718 5.7e-07 57.8 50 54.0
AL3G14340 Arabidopsis lyrata HOM05D000914 ORTHO05D000718 7.5e-07 57.4 42 57.1
AT3G04350 Arabidopsis thaliana HOM05D000914 ORTHO05D000718 7.5e-07 57.4 42 57.1
BcaC04g18678 Brassica carinata HOM05D000914 ORTHO05D000718 7.5e-07 57.4 32 75.0
C09p58170 Brassica napus HOM05D000914 ORTHO05D000718 7.5e-07 57.4 32 75.0
BolC9t58674H Brassica oleracea HOM05D000914 ORTHO05D000718 7.5e-07 57.4 32 75.0
HanXRQChr05g0145161 Helianthus annuus HOM05D000914 ORTHO05D000718 7.5e-07 57.4 30 76.7
Lj3g0001046 Lotus japonicus HOM05D000914 ORTHO05D000718 7.5e-07 57.4 40 62.5
Lalb_Chr06g0168231 Lupinus albus HOM05D000914 ORTHO05D000718 7.5e-07 57.4 48 50.0
Prupe.8G215600 Prunus persica HOM05D000914 ORTHO05D000718 7.5e-07 57.4 54 57.4
Solyc04g050140.3 Solanum lycopersicum HOM05D000914 ORTHO05D000718 7.5e-07 57.4 41 58.5
Solyc05g055910.4 Solanum lycopersicum HOM05D000914 ORTHO05D000718 7.5e-07 57.4 40 62.5
Sopen04g020850 Solanum pennellii HOM05D000914 ORTHO05D000718 7.5e-07 57.4 41 58.5
PGSC0003DMG400004140 Solanum tuberosum HOM05D000914 ORTHO05D000718 7.5e-07 57.4 41 58.5
PGSC0003DMG400023352 Solanum tuberosum HOM05D000914 ORTHO05D000718 7.5e-07 57.4 40 62.5
Carub.0003s0356 Capsella rubella HOM05D000914 ORTHO05D000718 9.7e-07 57.0 42 59.5
Manes.12G037600 Manihot esculenta HOM05D000914 ORTHO05D000718 9.7e-07 57.0 48 50.0
Nitab4.5_0000476g0210 Nicotiana tabacum HOM05D000914 ORTHO05D000718 9.7e-07 57.0 40 62.5
Nitab4.5_0010891g0010 Nicotiana tabacum HOM05D000914 ORTHO05D000718 9.7e-07 57.0 40 62.5
QL09p041378 Quercus lobata HOM05D000914 ORTHO05D000718 9.7e-07 57.0 37 64.9
SalBow4G3277 Salvia bowleyana HOM05D000914 ORTHO05D000718 9.7e-07 57.0 38 57.9
arahy.Tifrunner.gnm1.ann1.BS7P7Y Arachis hypogaea HOM05D000914 ORTHO05D000718 1.3e-06 56.6 49 55.1
arahy.Tifrunner.gnm1.ann1.H1VN8R Arachis hypogaea HOM05D000914 ORTHO05D000718 1.3e-06 56.6 49 55.1
Ca_10024_v3 Cicer arietinum L. HOM05D000914 ORTHO05D000718 1.3e-06 56.6 49 53.1
Ciclev10031092m.g Citrus clementina HOM05D000914 ORTHO05D000718 1.3e-06 56.6 48 50.0
RcHm_v2.0_Chr6g0286641 Rosa chinensis HOM05D000914 ORTHO05D000718 1.3e-06 56.6 40 55.0
VMungo1127G1195 Vigna mungo HOM05D000914 ORTHO05D000718 1.3e-06 56.6 36 66.7
Migut.D00476 Erythranthe guttata HOM05D000914 ORTHO05D000718 1.7e-06 56.2 48 45.8
HanXRQChr11g0322581 Helianthus annuus HOM05D000914 ORTHO05D000718 1.7e-06 56.2 30 83.3
Nitab4.5_0002088g0040 Nicotiana tabacum HOM05D000914 ORTHO05D000718 1.7e-06 56.2 37 64.9
PSO782G4872 Papaver somniferum HOM05D000914 ORTHO05D000718 1.7e-06 56.2 69 47.8
Phvul.L001751 Phaseolus vulgaris HOM05D000914 ORTHO05D000718 1.7e-06 56.2 40 60.0
Psat7g171600 Pisum sativum HOM05D000914 ORTHO05D000718 1.7e-06 56.2 48 50.0
Sp6g25830 Schrenkiella parvula HOM05D000914 ORTHO05D000718 1.7e-06 56.2 32 71.9
C09p58040 Brassica napus HOM05D000914 ORTHO05D000718 2.2e-06 55.8 32 71.9
HanXRQChr06g0172561 Helianthus annuus HOM05D000914 ORTHO05D000718 2.2e-06 55.8 41 56.1
Lj2C45T6 Lonicera japonica HOM05D000914 ORTHO05D000718 2.2e-06 55.8 47 53.2
Manes.13G039900 Manihot esculenta HOM05D000914 ORTHO05D000718 2.2e-06 55.8 54 51.9
Peaxi162Scf00373g00139 Petunia axillaris HOM05D000914 ORTHO05D000718 2.2e-06 55.8 41 58.5
RcHm_v2.0_Chr6g0286661 Rosa chinensis HOM05D000914 ORTHO05D000718 2.2e-06 55.8 40 55.0
Sp3g03250 Schrenkiella parvula HOM05D000914 ORTHO05D000718 2.2e-06 55.8 42 57.1
CAN.G29.12 Capsicum annuum HOM05D000914 ORTHO05D000718 2.8e-06 55.5 41 56.1
Eucgr.K01427 Eucalyptus grandis HOM05D000914 ORTHO05D000718 2.8e-06 55.5 48 47.9
Nn1g02969 Nelumbo nucifera HOM05D000914 ORTHO05D000718 2.8e-06 55.5 32 68.8
Solyc09g064540.3 Solanum lycopersicum HOM05D000914 ORTHO05D000718 2.8e-06 55.5 48 45.8
DCAR_005514 Daucus carota HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 47.9
Duzib211G0541 Durio zibethinus HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 45.8
FvH4_2g20520 Fragaria vesca HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 47.9
FAN24G2293 Fragaria x ananassa HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 47.9
Glyma.10G165200 Glycine max HOM05D000914 ORTHO05D000718 3.7e-06 55.1 40 57.5
Lsat_1_v5_gn_9_46880 Lactuca sativa HOM05D000914 ORTHO05D000718 3.7e-06 55.1 30 73.3
Medtr4g077620 Medicago truncatula HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 47.9
Phvul.006G104300 Phaseolus vulgaris HOM05D000914 ORTHO05D000718 3.7e-06 55.1 39 61.5
Psat6g144320 Pisum sativum HOM05D000914 ORTHO05D000718 3.7e-06 55.1 40 60.0
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 43.8
THA.LOC104815975 Tarenaya hassleriana HOM05D000914 ORTHO05D000718 3.7e-06 55.1 38 60.5
Thecc.01G250500 Theobroma cacao HOM05D000914 ORTHO05D000718 3.7e-06 55.1 48 45.8
VMungo0540G1022 Vigna mungo HOM05D000914 ORTHO05D000718 3.7e-06 55.1 39 56.4
VMungo0720G2668 Vigna mungo HOM05D000914 ORTHO05D000718 3.7e-06 55.1 40 57.5
arahy.Tifrunner.gnm1.ann1.XRTP0J Arachis hypogaea HOM05D000914 ORTHO05D000718 4.8e-06 54.7 39 61.5
BcaC04g18677 Brassica carinata HOM05D000914 ORTHO05D000718 4.8e-06 54.7 32 68.8
BcaNung04820 Brassica carinata HOM05D000914 ORTHO05D000718 4.8e-06 54.7 42 57.1
CiPaw.04G190600 Carya illinoinensis HOM05D000914 ORTHO05D000718 4.8e-06 54.7 40 60.0
AUR62000628 Chenopodium quinoa HOM05D000914 ORTHO05D000718 4.8e-06 54.7 36 63.9
Thhalv10013152m.g Eutrema salsugineum HOM05D000914 ORTHO05D000718 4.8e-06 54.7 33 66.7
Gorai.004G057500 Gossypium raimondii HOM05D000914 ORTHO05D000718 4.8e-06 54.7 51 49.0
LjContig00222g0000258 Lotus japonicus HOM05D000914 ORTHO05D000718 4.8e-06 54.7 54 55.6
Lalb_Chr19g0139891 Lupinus albus HOM05D000914 ORTHO05D000718 4.8e-06 54.7 54 50.0
Peaxi162Scf00043g02718 Petunia axillaris HOM05D000914 ORTHO05D000718 4.8e-06 54.7 48 45.8
Peaxi162Scf00156g00075 Petunia axillaris HOM05D000914 ORTHO05D000718 4.8e-06 54.7 32 75.0
Phvul.002G038300 Phaseolus vulgaris HOM05D000914 ORTHO05D000718 4.8e-06 54.7 54 53.7
SalBow1G1538 Salvia bowleyana HOM05D000914 ORTHO05D000718 4.8e-06 54.7 39 64.1
Ca_24449_v3 Cicer arietinum L. HOM05D000914 ORTHO05D000718 6.3e-06 54.3 40 57.5
SalBow1G0660 Salvia bowleyana HOM05D000914 ORTHO05D000718 6.3e-06 54.3 39 61.5
PGR119G2152 Punica granatum HOM05D000914 ORTHO05D000718 8.2e-06 53.9 37 62.2
TPR.G34274 Trifolium pratense HOM05D000914 ORTHO05D000718 8.2e-06 53.9 37 59.5


User provided reference genes

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