Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 6.8e-207 723.8 369 100.0
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 6.7e-138 494.6 374 72.7
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 2.1e-136 489.6 369 72.1
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 1.4e-132 476.9 352 72.4
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 1.9e-132 476.5 358 70.4
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 3.0e-130 469.2 360 70.3
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 5.1e-130 468.4 339 72.9
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 8.7e-130 467.6 375 67.5
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 8.7e-130 467.6 329 74.8
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 1.1e-129 467.2 327 75.5
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.1e-129 467.2 381 67.5
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 1.5e-129 466.8 327 75.2
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 1.9e-129 466.5 348 72.4
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 2.5e-129 466.1 357 68.6
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 3.3e-129 465.7 348 71.3
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 5.7e-129 464.9 279 83.9
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 5.7e-129 464.9 328 74.4
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 2.8e-128 462.6 335 71.9
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 3.7e-128 462.2 327 74.9
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 4.8e-128 461.8 340 72.1
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 4.8e-128 461.8 353 69.7
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 6.3e-128 461.5 326 73.0
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 6.3e-128 461.5 328 74.4
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 6.3e-128 461.5 319 74.6
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 1.8e-127 459.9 327 74.0
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 2.4e-127 459.5 339 70.8
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 4.1e-127 458.8 370 67.0
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 4.1e-127 458.8 336 71.1
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 5.3e-127 458.4 320 74.1
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 6.9e-127 458.0 359 67.1
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 2.0e-126 456.4 374 66.6
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 2.0e-126 456.4 320 74.1
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 3.4e-126 455.7 316 74.1
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 7.7e-126 454.5 360 66.7
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 7.7e-126 454.5 360 66.7
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 1.0e-125 454.1 329 73.6
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 1.3e-125 453.8 296 79.1
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 1.7e-125 453.4 308 75.0
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 3.8e-125 452.2 331 72.8
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 3.8e-125 452.2 335 70.7
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 5.0e-125 451.8 333 71.8
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.0e-125 451.8 317 73.8
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 8.5e-125 451.1 331 71.3
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 2.5e-124 449.5 334 70.1
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 4.2e-124 448.7 338 69.2
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 4.2e-124 448.7 340 70.6
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 4.2e-124 448.7 331 71.3
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 5.5e-124 448.4 317 73.5
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 5.5e-124 448.4 313 74.4
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 5.5e-124 448.4 327 71.9
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 7.2e-124 448.0 340 70.6
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 1.2e-123 447.2 340 70.3
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.2e-123 447.2 317 73.2
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 1.2e-123 447.2 317 73.5
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 1.2e-123 447.2 392 62.8
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 1.6e-123 446.8 273 80.2
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 1.6e-123 446.8 279 78.9
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 2.1e-123 446.4 300 75.3
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 4.6e-123 445.3 326 71.2
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 6.1e-123 444.9 327 70.9
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 1.0e-122 444.1 323 70.9
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 1.4e-122 443.7 326 71.2
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 3.9e-122 442.2 335 69.3
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 3.9e-122 442.2 349 67.9
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 5.1e-122 441.8 321 71.7
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 5.1e-122 441.8 331 71.6
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 1.5e-121 440.3 326 71.2
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 3.3e-121 439.1 327 69.1
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 4.3e-121 438.7 313 72.5
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 5.7e-121 438.3 336 70.2
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 2.8e-120 436.0 260 81.9
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 6.3e-120 434.9 355 66.5
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 6.3e-120 434.9 328 70.1
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 1.4e-119 433.7 353 67.7
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 4.1e-119 432.2 348 66.7
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 6.9e-119 431.4 273 76.2
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 9.1e-119 431.0 320 68.8
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 9.1e-119 431.0 372 62.4
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 1.2e-118 430.6 366 63.9
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.6e-118 429.5 362 63.5
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 4.5e-118 428.7 361 63.7
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 5.9e-118 428.3 315 70.2
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 5.9e-118 428.3 361 63.4
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 5.9e-118 428.3 275 75.6
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 1.0e-117 427.6 362 62.7
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.0e-117 427.6 336 66.7
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 1.3e-117 427.2 318 70.1
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 1.3e-117 427.2 275 74.5
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 2.2e-117 426.4 364 62.9
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 2.2e-117 426.4 321 68.2
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 2.2e-117 426.4 334 70.1
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 2.9e-117 426.0 362 62.7
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 2.9e-117 426.0 336 65.8
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 5.0e-117 425.2 332 67.2
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 5.0e-117 425.2 332 67.2
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 8.5e-117 424.5 277 75.5
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.4e-116 423.7 326 67.8
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.9e-116 423.3 277 75.1
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.9e-116 423.3 275 74.5
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 3.2e-116 422.5 265 77.7
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 4.2e-116 422.2 275 74.2
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 7.2e-116 421.4 276 75.7
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 9.4e-116 421.0 321 67.6
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 9.4e-116 421.0 326 67.8
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.2e-115 420.6 271 73.8
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 1.6e-115 420.2 275 75.3
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 1.6e-115 420.2 275 75.3
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 1.6e-115 420.2 275 75.3
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 1.6e-115 420.2 275 75.3
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 2.1e-115 419.9 328 66.5
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 2.7e-115 419.5 274 75.2
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 2.7e-115 419.5 277 74.4
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 4.7e-115 418.7 278 74.1
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 7.9e-115 417.9 277 73.6
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 1.8e-114 416.8 278 73.7
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 1.8e-114 416.8 278 73.7
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.3e-114 416.4 277 73.6
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 9.1e-111 404.4 320 66.2
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 5.5e-108 395.2 406 56.2
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 9.4e-108 394.4 321 65.7
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 7.0e-103 378.3 277 71.8
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 1.2e-102 377.5 242 77.7
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 2.2e-101 373.2 269 72.9
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.9e-100 370.2 321 59.8
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 5.5e-100 368.6 216 84.3
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 7.2e-100 368.2 283 68.9
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 8.5e-93 344.7 265 70.2
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.4e-87 326.6 190 84.2
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 8.6e-85 318.2 257 67.7
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 6.1e-83 312.0 299 52.8
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.5e-81 307.4 270 55.9
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 2.4e-79 300.1 377 44.8
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 9.2e-79 298.1 273 61.5
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 7.3e-76 288.5 285 56.8
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.7e-72 276.2 220 69.1
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 6.4e-72 275.4 220 69.1
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 8.9e-66 255.0 255 49.0
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 1.2e-65 254.6 252 59.9
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 2.5e-60 236.9 162 78.4
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 3.3e-60 236.5 178 66.3
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 2.8e-59 233.4 178 65.7
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 4.7e-59 232.6 134 82.8
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 6.2e-59 232.3 178 65.7
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 4.0e-58 229.6 223 61.0
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.6e-57 226.9 205 62.9
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 1.2e-41 174.9 102 79.4
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 3.8e-40 169.9 114 71.1
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 1.4e-39 167.9 115 69.6
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 4.3e-36 156.4 157 51.0
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 2.2e-32 144.1 76 88.2
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 6.4e-32 142.5 79 87.3
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.4e-31 141.4 76 85.5
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 3.2e-31 140.2 131 56.5
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 2.4e-26 124.0 62 88.7
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 1.0e-24 118.6 113 46.9
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 2.3e-21 107.5 90 58.9
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 5.1e-21 106.3 93 62.4
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 5.1e-21 106.3 99 50.5
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 2.5e-20 104.0 91 65.9
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 3.4e-17 93.6 55 83.6
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 5.8e-17 92.8 161 37.3
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 3.8e-16 90.1 59 72.9
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 1.2e-14 85.1 59 71.2
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 1.0e-13 82.0 53 71.7
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 6.3e-11 72.8 54 63.0
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 4.1e-10 70.1 55 60.0


User provided reference genes

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