Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 1.4e-61 239.6 134 100.0
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 5.5e-58 227.6 134 88.8
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 2.1e-57 225.7 116 97.4
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 3.0e-56 221.9 116 96.6
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 3.7e-46 188.3 114 80.7
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 6.3e-46 187.6 116 79.3
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 8.3e-46 187.2 114 79.8
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 1.4e-45 186.4 116 78.4
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 2.4e-45 185.7 116 76.7
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 3.1e-45 185.3 114 78.9
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 4.1e-45 184.9 116 76.7
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 5.4e-45 184.5 114 77.2
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 7.0e-45 184.1 132 77.3
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 7.0e-45 184.1 114 78.1
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 9.1e-45 183.7 132 77.3
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 9.1e-45 183.7 114 76.3
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 1.2e-44 183.3 116 77.6
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 1.2e-44 183.3 116 78.4
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 2.0e-44 182.6 115 78.3
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 2.0e-44 182.6 116 77.6
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 2.7e-44 182.2 114 77.2
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 2.7e-44 182.2 114 76.3
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 2.7e-44 182.2 114 78.1
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 4.5e-44 181.4 114 76.3
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 4.5e-44 181.4 116 76.7
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 4.5e-44 181.4 114 75.4
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 5.9e-44 181.0 115 76.5
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 7.7e-44 180.6 114 73.7
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 1.0e-43 180.3 132 68.9
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 1.7e-43 179.5 116 75.9
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 2.3e-43 179.1 116 77.6
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 2.3e-43 179.1 116 75.9
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 2.3e-43 179.1 114 75.4
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 2.3e-43 179.1 114 75.4
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 2.3e-43 179.1 114 75.4
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 2.9e-43 178.7 116 75.0
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 3.8e-43 178.3 116 76.7
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 5.0e-43 177.9 113 78.8
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 5.0e-43 177.9 116 75.9
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 5.0e-43 177.9 114 74.6
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 8.6e-43 177.2 115 75.7
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 1.1e-42 176.8 116 74.1
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 1.1e-42 176.8 114 75.4
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 1.1e-42 176.8 114 73.7
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 1.1e-42 176.8 116 75.0
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 1.5e-42 176.4 138 68.1
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.5e-42 176.4 114 73.7
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 1.9e-42 176.0 116 70.7
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 2.5e-42 175.6 113 76.1
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 2.5e-42 175.6 116 76.7
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 2.5e-42 175.6 116 74.1
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 2.5e-42 175.6 114 72.8
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 3.3e-42 175.3 116 74.1
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 3.3e-42 175.3 116 70.7
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.6e-42 174.5 121 71.9
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 9.5e-42 173.7 114 73.7
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 1.2e-41 173.3 114 75.4
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 2.8e-41 172.2 116 70.7
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 8.0e-41 170.6 127 70.9
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 1.0e-40 170.2 116 70.7
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 1.4e-40 169.9 113 76.1
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 1.4e-40 169.9 121 73.6
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.8e-40 169.5 129 67.4
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.8e-40 169.5 129 67.4
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 1.8e-40 169.5 114 72.8
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 3.0e-40 168.7 116 71.6
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 5.2e-40 167.9 120 73.3
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 5.2e-40 167.9 116 72.4
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 5.2e-40 167.9 116 70.7
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 6.8e-40 167.5 121 71.1
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 8.9e-40 167.2 114 69.3
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 1.2e-39 166.8 129 69.0
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 2.6e-39 165.6 113 71.7
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 2.6e-39 165.6 139 61.2
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 2.6e-39 165.6 139 61.2
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 3.4e-39 165.2 117 71.8
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 4.4e-39 164.9 116 72.4
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 9.8e-39 163.7 116 72.4
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 1.3e-38 163.3 116 69.8
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 1.7e-38 162.9 126 66.7
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 2.9e-38 162.2 127 64.6
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 2.9e-38 162.2 116 71.6
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 4.9e-38 161.4 116 69.8
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 2.4e-37 159.1 113 67.3
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 2.4e-37 159.1 116 68.1
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 3.2e-37 158.7 114 66.7
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 7.0e-37 157.5 115 66.1
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 2.0e-36 156.0 114 64.9
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 7.8e-36 154.1 115 66.1
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 5.0e-35 151.4 90 80.0
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 8.6e-35 150.6 107 68.2
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.1e-34 150.2 88 80.7
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 5.6e-34 147.9 113 67.3
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 5.6e-34 147.9 114 64.9
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 3.6e-33 145.2 150 52.7
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 6.2e-33 144.4 114 65.8
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 1.0e-32 143.7 128 56.2
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.4e-32 143.3 171 48.0
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 1.4e-32 143.3 116 67.2
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 1.8e-32 142.9 114 64.0
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 2.3e-32 142.5 129 61.2
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.2e-32 141.4 114 64.9
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 2.0e-31 139.4 114 62.3
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 7.5e-31 137.5 85 77.6
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 1.3e-30 136.7 100 71.0
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 1.3e-30 136.7 92 69.6
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 1.7e-30 136.3 121 62.0
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 3.7e-30 135.2 111 65.8
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.9e-30 134.8 111 64.0
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.1e-29 133.7 84 78.6
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 1.4e-29 133.3 111 64.9
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 1.9e-29 132.9 116 63.8
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 2.4e-29 132.5 116 60.3
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 5.4e-29 131.3 133 54.1
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 7.0e-29 131.0 106 61.3
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 6.0e-28 127.9 108 58.3
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 7.3e-26 120.9 111 54.1
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.2e-25 120.2 108 59.3
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 5.2e-24 114.8 101 54.5
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 2.2e-22 109.4 70 72.9
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 2.9e-22 109.0 69 73.9
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 3.7e-22 108.6 70 71.4
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 7.1e-21 104.4 171 38.6
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 8.6e-19 97.4 82 62.2
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 8.4e-14 80.9 60 66.7
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 2.4e-13 79.3 66 51.5
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 3.2e-13 79.0 83 56.6
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 1.1e-10 70.5 47 74.5
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 1.1e-10 70.5 51 62.7
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 1.5e-10 70.1 49 67.3
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-08 62.4 46 69.6


User provided reference genes

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