Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 6.7e-193 677.2 343 100.0
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 1.9e-163 579.3 345 82.9
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 1.2e-162 576.6 345 82.0
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 1.9e-139 499.6 334 76.3
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 1.0e-132 477.2 344 68.9
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 1.9e-131 473.0 343 68.2
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 9.6e-131 470.7 346 69.4
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 3.6e-130 468.8 343 68.5
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 6.2e-130 468.0 347 68.6
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 1.1e-129 467.2 341 67.2
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 1.8e-129 466.5 340 67.4
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 3.1e-129 465.7 345 66.7
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 5.3e-129 464.9 343 66.8
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.5e-128 463.4 344 66.9
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 1.5e-128 463.4 341 66.6
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 1.5e-128 463.4 343 66.8
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 2.6e-128 462.6 300 74.0
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 2.6e-128 462.6 343 67.3
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 3.4e-128 462.2 314 72.6
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 3.4e-128 462.2 343 67.9
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 4.5e-128 461.8 343 67.6
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 5.8e-128 461.5 342 66.4
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 1.7e-127 459.9 341 67.2
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 2.2e-127 459.5 347 66.3
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 3.8e-127 458.8 353 66.9
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 4.9e-127 458.4 318 70.8
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 6.4e-127 458.0 347 66.0
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 1.1e-126 457.2 343 66.8
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.1e-126 457.2 300 73.0
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 1.4e-126 456.8 344 66.6
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 1.4e-126 456.8 283 78.4
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.4e-126 456.8 300 73.0
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 1.9e-126 456.4 276 79.7
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 2.4e-126 456.1 305 73.8
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 2.4e-126 456.1 343 66.8
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 2.4e-126 456.1 353 66.0
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 4.2e-126 455.3 321 70.4
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 5.4e-126 454.9 343 67.3
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 7.1e-126 454.5 308 71.8
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 7.1e-126 454.5 283 77.4
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 7.1e-126 454.5 276 79.3
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 9.3e-126 454.1 337 68.5
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 9.3e-126 454.1 351 66.4
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.6e-125 453.4 343 66.2
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 1.6e-125 453.4 337 68.2
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 2.1e-125 453.0 324 70.7
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 3.5e-125 452.2 300 72.0
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 3.5e-125 452.2 325 69.8
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 4.6e-125 451.8 341 66.0
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 7.9e-125 451.1 342 66.4
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 7.9e-125 451.1 343 66.2
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 1.0e-124 450.7 305 72.8
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.0e-124 450.7 343 65.6
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 1.8e-124 449.9 361 64.8
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 1.8e-124 449.9 339 68.7
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 2.3e-124 449.5 288 75.3
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 3.0e-124 449.1 343 68.2
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 3.0e-124 449.1 283 77.4
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 5.1e-124 448.4 315 70.5
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 6.7e-124 448.0 284 77.5
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 6.7e-124 448.0 294 73.5
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 8.7e-124 447.6 351 66.7
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 1.1e-123 447.2 345 65.2
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.1e-123 447.2 338 66.0
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 1.1e-123 447.2 276 78.3
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 1.5e-123 446.8 344 65.4
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.5e-123 446.0 343 64.1
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 2.5e-123 446.0 326 68.7
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 2.5e-123 446.0 340 67.6
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 3.3e-123 445.7 280 76.8
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 4.3e-123 445.3 334 65.9
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 5.6e-123 444.9 274 76.6
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 5.6e-123 444.9 299 73.2
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 9.6e-123 444.1 343 64.7
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 1.3e-122 443.7 274 78.1
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 2.8e-122 442.6 339 66.7
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 3.7e-122 442.2 284 73.6
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 1.8e-121 439.9 307 69.7
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.8e-121 439.9 336 65.5
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 2.4e-121 439.5 280 75.7
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 2.4e-121 439.5 347 64.3
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 4.0e-121 438.7 313 69.3
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 5.3e-121 438.3 276 75.7
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 1.5e-120 436.8 284 72.9
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.5e-120 436.8 325 67.1
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 1.5e-120 436.8 275 74.5
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 3.4e-120 435.6 276 75.7
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 9.9e-120 434.1 329 65.0
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 9.9e-120 434.1 317 68.1
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 1.3e-119 433.7 277 75.5
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 2.9e-119 432.6 351 63.5
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 2.9e-119 432.6 276 75.0
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 8.4e-119 431.0 265 79.6
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 1.1e-118 430.6 313 67.1
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 1.1e-118 430.6 319 67.1
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 1.4e-118 430.3 276 73.9
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 1.4e-118 430.3 318 67.6
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 1.4e-118 430.3 276 73.9
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 1.9e-118 429.9 277 71.8
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 3.2e-118 429.1 276 73.9
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 3.2e-118 429.1 276 73.9
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 4.2e-118 428.7 321 66.7
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 5.5e-118 428.3 315 67.0
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 7.1e-118 427.9 276 73.6
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 9.3e-118 427.6 315 67.0
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 2.7e-117 426.0 315 67.0
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 3.5e-117 425.6 332 66.0
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 3.5e-117 425.6 307 69.7
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 6.0e-117 424.9 280 71.1
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 7.9e-117 424.5 315 66.3
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 7.9e-117 424.5 272 75.0
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 7.9e-117 424.5 324 65.1
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 1.0e-116 424.1 276 73.2
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.3e-116 423.7 315 66.0
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 1.3e-116 423.7 276 72.8
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 2.3e-116 422.9 276 72.5
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 3.9e-116 422.2 276 72.1
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 3.9e-116 422.2 315 66.0
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 3.9e-116 422.2 312 65.1
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 6.7e-116 421.4 271 74.9
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 1.5e-115 420.2 325 65.8
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 8.2e-114 414.5 317 66.2
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 2.4e-113 412.9 344 59.6
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 3.1e-113 412.5 357 61.6
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 5.3e-113 411.8 274 71.9
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 3.4e-112 409.1 277 69.7
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 4.9e-111 405.2 306 66.7
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 1.2e-109 400.6 316 62.7
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 3.5e-109 399.1 279 69.9
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 4.6e-109 398.7 313 64.2
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 1.0e-108 397.5 315 63.8
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 1.9e-107 393.3 307 65.1
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 7.4e-107 391.3 356 60.7
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 2.2e-106 389.8 310 66.1
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 1.7e-103 380.2 309 57.6
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 1.9e-102 376.7 309 62.1
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 4.8e-98 362.1 288 65.6
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 4.1e-97 359.0 277 61.4
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 1.3e-95 354.0 277 60.6
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 1.3e-95 354.0 329 53.8
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 5.9e-88 328.6 186 85.5
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 2.0e-83 313.5 255 62.0
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 1.4e-81 307.4 278 53.6
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 3.1e-81 306.2 274 52.6
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 1.2e-80 304.3 282 55.0
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 5.5e-78 295.4 194 74.7
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 4.0e-76 289.3 250 61.2
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 1.7e-74 283.9 289 51.6
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 5.7e-67 258.8 218 65.1
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 7.0e-65 251.9 174 74.7
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 2.5e-62 243.4 238 57.1
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 4.5e-56 222.6 310 43.2
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 2.3e-55 220.3 220 55.9
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 2.3e-55 220.3 123 83.7
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 9.5e-54 214.9 159 63.5
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 4.7e-53 212.6 175 64.6
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.5e-46 191.0 199 52.3
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 2.5e-46 190.3 253 44.7
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 4.7e-37 159.5 138 58.0
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 5.2e-36 156.0 90 82.2
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 1.4e-33 147.9 280 32.1
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 6.6e-31 139.0 77 87.0
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 2.1e-24 117.5 96 60.4
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 2.1e-24 117.5 89 65.2
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 8.7e-23 112.1 79 69.6
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.1e-22 111.7 164 42.1
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 9.6e-22 108.6 152 43.4
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 2.2e-18 97.4 66 75.8
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.9e-17 94.4 84 56.0
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 4.0e-12 76.6 179 29.1
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 7.6e-11 72.4 94 45.7
CAN.G1019.1 Capsicum annuum HOM05D004037 ORTHO05D004744 1.0e-07 62.0 59 52.5
Lsat_1_v5_gn_5_112181 Lactuca sativa HOM05D002510 ORTHO05D007210 5.6e-06 56.2 29 89.7


User provided reference genes

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