Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 3.2e-68 261.5 126 100.0
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 2.7e-62 241.9 126 89.7
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 2.3e-61 238.8 126 88.9
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 5.0e-61 237.7 126 87.3
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 4.2e-60 234.6 124 86.3
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 4.2e-60 234.6 126 86.5
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 2.1e-59 232.3 126 84.1
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 2.8e-59 231.9 126 84.9
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 2.8e-59 231.9 126 84.9
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 4.7e-59 231.1 126 84.9
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 6.1e-59 230.7 126 83.3
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 8.0e-59 230.3 124 85.5
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 1.8e-58 229.2 126 84.1
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 1.8e-58 229.2 126 84.9
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.0e-58 228.4 126 84.9
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 3.0e-58 228.4 126 84.9
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 5.2e-58 227.6 126 83.3
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 5.2e-58 227.6 126 83.3
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 6.8e-58 227.3 126 81.7
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 8.9e-58 226.9 123 86.2
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 1.5e-57 226.1 126 82.5
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 1.5e-57 226.1 126 84.1
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.5e-57 226.1 126 84.1
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 1.5e-57 226.1 127 84.3
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 1.5e-57 226.1 127 84.3
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 2.6e-57 225.3 124 83.9
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 3.4e-57 224.9 126 84.1
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 3.4e-57 224.9 126 84.1
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 3.4e-57 224.9 126 83.3
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 5.7e-57 224.2 126 84.1
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 7.5e-57 223.8 126 81.7
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 2.2e-56 222.2 126 81.0
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 2.9e-56 221.9 126 81.0
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 6.4e-56 220.7 126 83.3
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 6.4e-56 220.7 126 80.2
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 6.4e-56 220.7 124 81.5
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 8.3e-56 220.3 126 80.2
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 8.3e-56 220.3 126 80.2
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 8.3e-56 220.3 124 81.5
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 1.1e-55 219.9 124 82.3
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 1.4e-55 219.5 126 84.1
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 1.4e-55 219.5 127 82.7
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 1.4e-55 219.5 126 81.7
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 1.8e-55 219.2 127 81.9
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 1.8e-55 219.2 126 79.4
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 3.2e-55 218.4 126 81.0
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 3.2e-55 218.4 126 81.0
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 4.1e-55 218.0 126 79.4
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 5.4e-55 217.6 126 80.2
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 5.4e-55 217.6 126 79.4
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 7.0e-55 217.2 126 79.4
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 7.0e-55 217.2 126 79.4
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 7.0e-55 217.2 124 80.6
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 1.2e-54 216.5 126 79.4
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 1.6e-54 216.1 126 78.6
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 1.6e-54 216.1 124 79.8
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 1.6e-54 216.1 126 80.2
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 3.5e-54 214.9 126 78.6
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 3.5e-54 214.9 126 79.4
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 4.6e-54 214.5 117 82.1
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 4.6e-54 214.5 126 78.6
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 5.9e-54 214.2 126 77.8
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 5.9e-54 214.2 124 81.5
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 7.8e-54 213.8 124 80.6
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 7.8e-54 213.8 126 78.6
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 1.0e-53 213.4 126 78.6
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 1.0e-53 213.4 126 78.6
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 1.0e-53 213.4 126 82.5
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.0e-53 213.4 125 76.0
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 1.0e-53 213.4 122 78.7
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 2.3e-53 212.2 126 77.8
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 6.6e-53 210.7 126 79.4
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 6.6e-53 210.7 126 80.2
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 1.9e-52 209.1 125 76.8
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 1.9e-52 209.1 126 79.4
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 3.3e-52 208.4 126 77.0
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 7.3e-52 207.2 126 76.2
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 1.2e-51 206.5 109 85.3
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 3.1e-50 201.8 126 75.4
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 6.8e-50 200.7 105 87.6
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 8.9e-50 200.3 126 77.0
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 1.3e-48 196.4 123 71.5
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 8.3e-48 193.7 163 60.1
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 1.7e-45 186.0 126 69.8
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 1.6e-43 179.5 126 68.3
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 3.2e-39 165.2 223 43.9
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 3.5e-38 161.8 126 60.3
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.7e-37 159.5 122 63.1
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 2.5e-36 155.6 126 57.9
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 5.6e-36 154.5 84 82.1
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 5.6e-36 154.5 122 58.2
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 5.6e-36 154.5 82 84.1
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 2.8e-35 152.1 101 70.3
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 2.8e-35 152.1 83 83.1
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 8.9e-34 147.1 126 60.3
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 6.0e-30 134.4 87 69.0
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.7e-27 124.8 94 63.8
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 5.6e-20 101.3 52 92.3
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 5.3e-18 94.7 61 75.4
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.2e-14 83.6 52 75.0
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 2.3e-13 79.3 44 84.1
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 5.1e-13 78.2 43 83.7
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 8.7e-13 77.4 43 83.7
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.1e-12 77.0 43 83.7
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 8.1e-11 70.9 43 76.7
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 1.5e-09 66.6 43 72.1
PRCOL_00005528 Prasinoderma coloniale HOM05D007259 ORTHO05D009158 8.4e-08 60.8 85 37.6


User provided reference genes

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