Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 7.6e-289 996.5 519 100.0
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 2.4e-250 868.6 533 85.0
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 8.8e-245 850.1 519 84.8
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.3e-232 809.7 527 78.9
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 3.2e-231 805.1 502 79.9
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 8.8e-229 797.0 523 76.5
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 9.8e-228 793.5 517 77.9
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.7e-227 792.7 520 76.9
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 1.7e-227 792.7 521 77.2
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 4.9e-227 791.2 529 76.7
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 4.9e-227 791.2 516 77.1
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-226 789.6 518 77.6
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 2.4e-226 788.9 521 75.8
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 2.4e-226 788.9 526 75.7
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 5.4e-226 787.7 521 75.6
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 5.4e-226 787.7 519 76.3
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 7.0e-226 787.3 514 77.0
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 9.1e-226 786.9 520 75.8
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 9.1e-226 786.9 518 77.4
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 1.6e-225 786.2 517 76.0
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.6e-225 786.2 521 75.4
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 4.5e-225 784.6 500 78.8
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 7.7e-225 783.9 540 74.3
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 1.0e-224 783.5 521 75.2
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.3e-224 783.1 521 76.0
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 5.0e-224 781.2 501 77.8
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 8.6e-224 780.4 540 74.3
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 8.6e-224 780.4 498 78.5
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.1e-223 780.0 501 77.8
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 1.9e-223 779.2 515 76.3
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.9e-223 779.2 531 75.0
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 1.9e-223 779.2 515 75.7
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 3.3e-223 778.5 501 77.6
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 4.2e-223 778.1 544 73.7
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 7.2e-223 777.3 519 74.2
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 7.2e-223 777.3 506 76.3
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 3.6e-222 775.0 501 77.8
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.0e-221 773.5 515 77.1
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 8.9e-221 770.4 514 76.3
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.7e-219 766.1 501 77.4
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 1.8e-218 762.7 502 75.7
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 2.4e-218 762.3 501 77.0
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 2.4e-218 762.3 500 77.0
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 2.4e-218 762.3 525 74.3
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 4.1e-218 761.5 519 73.2
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 9.2e-218 760.4 501 76.8
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 2.0e-217 759.2 519 73.0
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.0e-216 756.9 509 76.0
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.3e-216 756.5 515 74.4
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.3e-216 756.5 515 75.0
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.5e-215 753.1 511 74.4
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 2.5e-215 752.3 511 74.2
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 4.3e-215 751.5 513 74.1
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 5.6e-215 751.1 511 74.0
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 5.6e-215 751.1 522 73.4
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 7.3e-215 750.7 514 73.5
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 9.5e-215 750.4 516 72.7
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 4.7e-214 748.0 527 72.5
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 6.2e-214 747.7 533 72.0
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.0e-213 746.9 504 74.6
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 3.1e-213 745.3 504 74.0
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 5.2e-213 744.6 501 75.4
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 9.8e-212 740.3 504 74.2
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 4.9e-211 738.0 530 72.8
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 8.3e-211 737.3 618 65.2
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 2.7e-209 732.3 521 72.2
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 2.7e-209 732.3 511 72.4
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.7e-209 732.3 513 72.9
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 6.0e-209 731.1 513 72.3
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 7.8e-209 730.7 520 71.9
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 3.0e-208 728.8 525 70.9
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 5.0e-208 728.0 513 72.3
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 8.6e-208 727.2 504 73.2
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.6e-208 727.2 513 72.5
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 8.6e-208 727.2 619 64.0
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.9e-207 726.1 545 69.0
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 3.3e-207 725.3 516 72.1
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 9.5e-207 723.8 517 71.0
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.1e-205 720.3 514 73.2
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 2.6e-204 715.7 504 72.4
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 4.4e-204 714.9 518 70.5
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 5.6e-199 698.0 542 67.2
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 4.9e-195 684.9 519 69.2
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.9e-192 675.2 463 73.4
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 5.6e-191 671.4 592 62.3
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 8.9e-189 664.1 582 62.4
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.2e-187 659.4 504 68.1
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 9.3e-186 654.1 488 69.7
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 5.6e-183 644.8 519 63.2
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 9.6e-183 644.0 425 78.6
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.3e-182 643.7 515 64.1
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 6.2e-182 641.3 518 62.9
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.8e-173 613.2 449 69.0
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.8e-172 608.2 531 59.7
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.8e-172 608.2 531 59.7
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 5.8e-164 581.6 443 65.0
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.9e-159 566.6 461 65.7
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 6.5e-155 551.6 486 57.6
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 3.9e-152 542.3 388 71.6
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.9e-151 540.0 516 52.9
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.9e-151 540.0 397 69.5
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 4.8e-150 535.4 321 87.5
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 1.1e-149 534.3 358 75.1
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.3e-144 516.5 364 72.3
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 3.4e-140 502.7 335 74.3
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 3.1e-125 453.0 446 60.1
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.8e-109 400.6 249 78.3
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 9.2e-109 398.3 249 77.9
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 1.2e-103 381.3 520 43.1
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 3.6e-97 359.8 240 76.2
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 3.4e-95 353.2 487 41.1
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 2.9e-86 323.6 477 40.3
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 5.1e-75 286.2 331 50.8
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 1.9e-69 267.7 173 78.6
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-54 216.9 508 33.5
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 9.6e-50 202.2 508 33.3
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 9.0e-48 195.7 113 86.7
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 1.2e-47 195.3 199 56.3
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 1.2e-47 195.3 478 33.3
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 4.1e-40 170.2 292 40.4
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.4e-37 161.8 457 31.5
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 3.2e-37 160.6 489 31.9
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 9.3e-37 159.1 115 67.8
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 8.7e-35 152.5 480 32.5
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-30 137.1 276 38.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 5.0e-30 136.7 276 37.7
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-27 129.0 290 34.5
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.5e-26 125.2 86 68.6
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-26 124.8 330 33.6
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 4.4e-26 123.6 219 42.0
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 5.3e-24 116.7 209 40.7
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 3.4e-23 114.0 59 91.5
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 5.9e-23 113.2 313 28.8
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 7.7e-23 112.8 352 31.5
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-21 109.0 207 41.1
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 9.4e-21 105.9 330 28.8
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 2.1e-20 104.8 388 30.9
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-20 103.6 208 38.9
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 4.7e-20 103.6 435 29.7
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-19 101.7 158 41.1
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 3.9e-19 100.5 434 29.7
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 2.0e-18 98.2 74 63.5
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 2.6e-18 97.8 238 29.8
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 5.7e-18 96.7 158 39.9
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.4e-16 92.0 326 29.8
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 2.5e-13 81.3 287 31.0
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-10 72.0 160 35.0
RcHm_v2.0_Chr5g0002281 Rosa chinensis HOM05D003404 ORTHO05D029456 1.7e-06 58.5 32 78.1


User provided reference genes

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