Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.4e-34 149.1 74 100.0
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 4.2e-23 110.9 85 68.2
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 2.1e-22 108.6 85 71.8
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 1.0e-21 106.3 85 67.1
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.1e-19 98.6 85 62.4
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 1.1e-18 96.3 81 67.9
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 9.9e-17 89.7 81 63.0
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.8e-16 87.8 92 56.5
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 4.9e-16 87.4 82 63.4
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 4.9e-16 87.4 85 58.8
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 4.9e-16 87.4 85 58.8
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 8.4e-16 86.7 81 64.2
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 1.4e-15 85.9 85 55.3
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 1.9e-15 85.5 89 53.9
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 2.4e-15 85.1 96 49.0
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 3.2e-15 84.7 85 57.6
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 7.1e-15 83.6 88 54.5
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.3e-15 83.2 88 54.5
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 1.2e-14 82.8 91 53.8
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.2e-14 82.8 84 56.0
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 2.1e-14 82.0 75 61.3
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 2.1e-14 82.0 85 55.3
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 3.5e-14 81.3 85 54.1
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 4.6e-14 80.9 88 53.4
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 7.9e-14 80.1 80 55.0
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 7.9e-14 80.1 88 51.1
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 3.0e-13 78.2 82 53.7
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 3.0e-13 78.2 75 58.7
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 3.9e-13 77.8 85 51.8
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 5.1e-13 77.4 92 51.1
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 5.1e-13 77.4 83 59.0
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 6.7e-13 77.0 85 51.8
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 8.7e-13 76.6 91 49.5
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 1.5e-12 75.9 85 50.6
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 1.9e-12 75.5 85 50.6
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 1.9e-12 75.5 84 51.2
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.3e-11 72.8 85 48.2
Lsat_1_v5_gn_3_40020 Lactuca sativa HOM05D004838 ORTHO05D005373 1.6e-11 72.4 73 56.2
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 1.6e-11 72.4 84 53.6
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.1e-11 72.0 92 48.9
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 2.8e-11 71.6 83 54.2
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 4.8e-11 70.9 85 51.8
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 6.2e-11 70.5 74 54.1
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 8.1e-11 70.1 90 54.4
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.1e-10 69.7 94 46.8
ECA246G1803 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.4e-10 68.6 89 46.1
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.1e-10 68.2 95 45.3
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 3.1e-10 68.2 85 45.9
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 3.1e-10 68.2 85 45.9
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 6.9e-10 67.0 85 44.7
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 1.5e-09 65.9 90 41.1
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 2.0e-09 65.5 86 45.3
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 2.0e-09 65.5 85 44.7
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 4.5e-09 64.3 89 43.8
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 4.5e-09 64.3 85 43.5
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 5.8e-09 63.9 83 47.0
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 7.6e-09 63.5 83 44.6
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 1.0e-08 63.2 86 45.3
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 1.3e-08 62.8 85 43.5
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 1.3e-08 62.8 81 45.7
Lalb_Chr22g0356341 Lupinus albus HOM05D004838 ORTHO05D005373 2.9e-08 61.6 72 47.2
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 3.8e-08 61.2 81 43.2
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 4.9e-08 60.8 82 43.9
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 4.9e-08 60.8 86 43.0
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 1.4e-07 59.3 82 45.1
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 1.4e-07 59.3 80 43.8
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 2.5e-07 58.5 85 42.4
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 4.2e-07 57.8 82 46.3
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 4.2e-07 57.8 80 42.5
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 4.2e-07 57.8 88 40.9
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 7.1e-07 57.0 78 43.6
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 9.3e-07 56.6 78 43.6
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 9.3e-07 56.6 85 41.2
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 1.6e-06 55.8 78 43.6
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.7e-06 55.1 77 49.4
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 4.6e-06 54.3 78 43.6
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 6.0e-06 53.9 82 36.6
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 7.9e-06 53.5 77 40.3
Sc21g0002480 Simmondsia chinensis HOM05D004838 ORTHO05D005373 7.9e-06 53.5 85 38.8


User provided reference genes

Program Settings