Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.3e-221 772.7 392 100.0
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 8.5e-192 673.7 381 88.2
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 1.8e-189 666.0 377 88.1
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 7.5e-172 607.4 383 78.1
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 6.4e-171 604.4 383 78.3
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 1.6e-169 599.7 383 78.3
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 5.9e-169 597.8 383 76.8
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 2.5e-167 592.4 383 77.0
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 5.6e-167 591.3 382 75.4
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 5.6e-167 591.3 382 75.4
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 3.1e-165 585.5 399 73.9
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.6e-164 582.4 383 74.9
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.3e-163 580.1 383 74.7
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 3.7e-163 578.6 383 74.2
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 4.9e-163 578.2 382 74.3
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 8.3e-163 577.4 383 73.1
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 4.1e-162 575.1 383 74.7
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 7.0e-162 574.3 377 74.0
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.6e-161 573.2 382 73.3
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 2.0e-161 572.8 387 73.4
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 2.0e-161 572.8 383 73.9
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 3.5e-161 572.0 390 72.8
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 3.5e-161 572.0 383 73.9
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.3e-160 570.1 385 74.0
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 2.3e-160 569.3 378 74.6
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 3.0e-160 568.9 382 72.8
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 3.0e-160 568.9 379 72.3
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 3.0e-160 568.9 387 73.1
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 3.9e-160 568.5 383 73.6
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 1.5e-159 566.6 391 72.9
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 1.5e-159 566.6 381 73.2
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.5e-159 566.6 381 73.2
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 4.3e-159 565.1 392 73.2
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 5.6e-159 564.7 389 71.5
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 1.6e-158 563.1 383 72.3
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 1.1e-157 560.5 384 73.2
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.4e-157 560.1 381 72.7
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 1.8e-157 559.7 382 71.2
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 2.3e-157 559.3 382 70.9
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 2.3e-157 559.3 383 71.0
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 3.1e-157 558.9 381 73.2
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 4.0e-157 558.5 383 71.5
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 4.0e-157 558.5 383 71.0
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 8.9e-157 557.4 382 72.5
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.5e-156 556.6 386 71.0
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 1.5e-156 556.6 383 70.0
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 3.4e-156 555.4 392 70.7
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 4.4e-156 555.1 392 69.9
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 4.4e-156 555.1 383 70.8
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 7.5e-156 554.3 384 71.4
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 7.5e-156 554.3 384 71.4
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 9.8e-156 553.9 383 70.0
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.3e-155 553.5 381 73.0
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 2.2e-155 552.7 384 70.8
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 2.9e-155 552.4 381 71.9
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 8.3e-155 550.8 385 70.6
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.1e-154 550.4 388 71.1
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 1.4e-154 550.1 382 70.9
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 1.4e-154 550.1 383 70.5
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 3.2e-154 548.9 383 70.2
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 3.2e-154 548.9 384 69.8
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 7.1e-154 547.7 382 70.2
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 9.2e-154 547.4 380 70.8
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 1.6e-153 546.6 384 69.8
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 1.6e-153 546.6 383 70.2
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 2.1e-153 546.2 381 72.2
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 2.7e-153 545.8 383 70.0
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 6.0e-153 544.7 381 71.4
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 2.3e-152 542.7 382 70.9
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 3.9e-152 542.0 383 69.5
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 8.6e-152 540.8 392 69.1
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 1.1e-151 540.4 380 71.1
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.5e-151 539.3 381 71.4
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 2.5e-151 539.3 387 70.3
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 2.5e-151 539.3 392 69.1
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 7.3e-151 537.7 381 69.3
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 2.8e-150 535.8 386 68.4
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 8.1e-150 534.3 378 67.7
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 2.6e-148 529.3 380 70.3
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 7.6e-148 527.7 377 69.8
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 4.9e-147 525.0 381 67.5
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 6.4e-147 524.6 358 71.2
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.4e-146 522.7 381 69.0
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 7.1e-146 521.2 515 54.8
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 4.6e-145 518.5 382 67.0
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 7.8e-145 517.7 426 63.6
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 3.9e-144 515.4 382 68.1
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 9.6e-143 510.8 346 73.1
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.8e-142 509.2 382 66.8
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 2.8e-142 509.2 383 66.3
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 2.4e-141 506.1 381 66.4
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 4.4e-140 501.9 383 65.8
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 4.9e-139 498.4 382 66.8
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 3.9e-136 488.8 382 65.4
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.3e-131 473.8 352 68.5
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 1.3e-131 473.8 312 75.0
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 5.6e-127 458.4 307 75.2
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 4.6e-121 438.7 380 57.4
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.3e-120 436.4 291 73.9
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 2.1e-118 429.9 334 66.2
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 4.8e-118 428.7 309 71.8
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 5.3e-117 425.2 378 55.6
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 6.9e-117 424.9 291 72.5
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.9e-115 419.5 307 69.1
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 4.9e-115 418.7 382 59.7
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 4.8e-110 402.1 381 54.3
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 9.0e-109 397.9 402 50.7
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.0e-108 396.7 379 54.6
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 2.7e-105 386.3 266 71.8
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 5.1e-104 382.1 268 71.3
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 6.9e-101 371.7 236 76.7
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.2e-98 362.8 377 54.9
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 7.2e-90 335.1 270 63.7
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 4.1e-85 319.3 232 70.7
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 3.0e-64 250.0 245 55.9
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 4.4e-63 246.1 148 77.0
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 2.3e-59 233.8 396 37.6
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 4.3e-58 229.6 427 35.8
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 6.8e-56 222.2 147 74.8
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 7.5e-55 218.8 421 35.6
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 4.0e-48 196.4 149 63.1
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 5.6e-42 176.0 110 75.5
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.1e-37 161.8 107 68.2
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 4.9e-30 136.3 185 42.7
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.9e-22 110.5 138 42.8
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 4.9e-22 109.8 66 75.8
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 3.2e-21 107.1 156 39.7
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 9.3e-21 105.5 148 45.9
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 3.3e-18 97.1 68 72.1
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 4.9e-14 83.2 118 39.0
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-13 80.9 69 55.1
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 1.2e-12 78.6 94 50.0
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 2.3e-11 74.3 36 97.2
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 8.7e-11 72.4 69 50.7
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 2.8e-09 67.4 36 88.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 8.1e-09 65.9 93 37.6
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.6e-07 59.3 75 41.3


User provided reference genes

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