Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0522 Erigeron canadensis HOM05D005001 ORTHO05D005796 0.0e+00 1656.3 852 100.0
HanXRQChr16g0531881 Helianthus annuus HOM05D005001 ORTHO05D005796 1.3e-253 880.2 720 68.3
Lsat_1_v5_gn_3_67981 Lactuca sativa HOM05D005001 ORTHO05D005796 1.1e-244 850.5 734 67.2
Dinv08162 Davidia involucrata HOM05D005001 ORTHO05D005796 1.1e-215 754.2 785 56.7
Lj2C499T6 Lonicera japonica HOM05D005001 ORTHO05D005796 1.9e-204 716.8 762 55.2
Dinv40189 Davidia involucrata HOM05D005001 ORTHO05D005796 2.8e-203 713.0 786 54.1
Atru.chr3.132 Acer truncatum HOM05D005001 ORTHO05D005796 5.2e-194 682.2 777 53.8
Haze_03653 Corylus avellana HOM05D005001 ORTHO05D005796 8.9e-194 681.4 776 52.3
Cfa007079 Carpinus fangiana HOM05D005001 ORTHO05D005796 1.2e-193 681.0 783 51.1
Cc07_g11880 Coffea canephora HOM05D005001 ORTHO05D005796 1.5e-193 680.6 782 51.4
Actinidia17358 Actinidia chinensis HOM05D005001 ORTHO05D005796 5.8e-193 678.7 786 52.3
Actinidia22897 Actinidia chinensis HOM05D005001 ORTHO05D005796 1.9e-191 673.7 786 51.7
CSS0006057 Camellia sinensis var. sinensis HOM05D005001 ORTHO05D005796 7.3e-188 661.8 771 51.9
QL06p052982 Quercus lobata HOM05D005001 ORTHO05D005796 2.3e-186 656.8 786 51.0
Cpa.g.sc6.369 Carica papaya HOM05D005001 ORTHO05D005796 3.1e-186 656.4 790 50.8
COL.COLO4_22551 Corchorus olitorius HOM05D005001 ORTHO05D005796 9.8e-185 651.4 782 51.2
Sabra05G0084100 Salix brachista HOM05D005001 ORTHO05D005796 2.4e-183 646.7 787 50.4
Manes.01G155500 Manihot esculenta HOM05D005001 ORTHO05D005796 4.6e-182 642.5 786 50.9
Rhsim10G0195500 Rhododendron simsii HOM05D005001 ORTHO05D005796 7.8e-182 641.7 760 52.8
Duzib147G1512 Durio zibethinus HOM05D005001 ORTHO05D005796 5.1e-181 639.0 782 50.9
Peaxi162Scf01475g00020 Petunia axillaris HOM05D005001 ORTHO05D005796 1.4e-178 630.9 786 50.3
Ciclev10024851m.g Citrus clementina HOM05D005001 ORTHO05D005796 6.8e-178 628.6 785 49.9
Potri.005G101700 Populus trichocarpa HOM05D005001 ORTHO05D005796 6.8e-178 628.6 788 49.2
CiPaw.07G002600 Carya illinoinensis HOM05D005001 ORTHO05D005796 1.2e-177 627.9 782 50.0
TAR628G1461 Trochodendron aralioides HOM05D005001 ORTHO05D005796 2.6e-177 626.7 791 48.0
vmacro20631 Vaccinium macrocarpon HOM05D005001 ORTHO05D005796 4.9e-176 622.5 756 51.7
Manes.02G114100 Manihot esculenta HOM05D005001 ORTHO05D005796 9.2e-175 618.2 781 49.2
Oeu042477.2 Olea europaea HOM05D005001 ORTHO05D005796 3.9e-173 612.8 722 51.2
RcHm_v2.0_Chr2g0097131 Rosa chinensis HOM05D005001 ORTHO05D005796 8.6e-173 611.7 786 48.3
Thecc.01G005400 Theobroma cacao HOM05D005001 ORTHO05D005796 1.1e-172 611.3 754 50.0
Solyc02g082680.4 Solanum lycopersicum HOM05D005001 ORTHO05D005796 1.5e-172 610.9 786 48.9
CSS0002200 Camellia sinensis var. sinensis HOM05D005001 ORTHO05D005796 5.6e-172 609.0 779 49.0
Prupe.7G183200 Prunus persica HOM05D005001 ORTHO05D005796 5.6e-172 609.0 788 49.4
Nitab4.5_0001467g0010 Nicotiana tabacum HOM05D005001 ORTHO05D005796 7.3e-172 608.6 786 48.9
Sopen02g027420 Solanum pennellii HOM05D005001 ORTHO05D005796 2.1e-171 607.1 786 49.0
Gohir.A02G177800 Gossypium hirsutum HOM05D005001 ORTHO05D005796 3.6e-171 606.3 775 49.4
PGSC0003DMG400001566 Solanum tuberosum HOM05D005001 ORTHO05D005796 6.2e-171 605.5 786 48.3
Gorai.003G002300 Gossypium raimondii HOM05D005001 ORTHO05D005796 1.5e-169 600.9 775 48.9
Gohir.D03G002000 Gossypium hirsutum HOM05D005001 ORTHO05D005796 4.4e-169 599.4 775 49.0
Nitab4.5_0004608g0060 Nicotiana tabacum HOM05D005001 ORTHO05D005796 7.6e-169 598.6 784 48.2
arahy.Tifrunner.gnm1.ann1.1YR532 Arachis hypogaea HOM05D005001 ORTHO05D005796 2.4e-167 593.6 791 48.3
arahy.Tifrunner.gnm1.ann1.XJ0R0A Arachis hypogaea HOM05D005001 ORTHO05D005796 2.4e-167 593.6 791 48.3
Glyma.11G086000 Glycine max HOM05D005001 ORTHO05D005796 2.4e-167 593.6 781 49.3
MSTRG.3631 Avicennia marina HOM05D005001 ORTHO05D005796 3.2e-167 593.2 784 48.0
DCAR_002956 Daucus carota HOM05D005001 ORTHO05D005796 4.2e-167 592.8 769 48.5
Glyma.01G158600 Glycine max HOM05D005001 ORTHO05D005796 7.1e-167 592.0 787 49.4
MD15G1231000 Malus domestica HOM05D005001 ORTHO05D005796 1.0e-165 588.2 776 48.7
FvH4_1g10290 Fragaria vesca HOM05D005001 ORTHO05D005796 3.9e-165 586.3 787 47.1
GSVIVG01026639001 Vitis vinifera HOM05D005001 ORTHO05D005796 3.9e-165 586.3 738 50.0
Migut.L00777 Erythranthe guttata HOM05D005001 ORTHO05D005796 6.6e-165 585.5 761 48.4
FAN26G0131 Fragaria x ananassa HOM05D005001 ORTHO05D005796 6.6e-165 585.5 787 47.1
FAN19G0848 Fragaria x ananassa HOM05D005001 ORTHO05D005796 1.9e-164 583.9 787 47.0
CiPaw.08G181700 Carya illinoinensis HOM05D005001 ORTHO05D005796 3.6e-163 579.7 731 50.1
VMungo1215G1172 Vigna mungo HOM05D005001 ORTHO05D005796 2.4e-162 577.0 825 46.5
CANSAT25G0747 Cannabis sativa HOM05D005001 ORTHO05D005796 2.6e-161 573.5 768 48.6
Ca_24983_v3 Cicer arietinum L. HOM05D005001 ORTHO05D005796 7.6e-161 572.0 759 49.0
Lj2g0010904 Lotus japonicus HOM05D005001 ORTHO05D005796 1.3e-160 571.2 784 47.6
TWI09G0186 Tripterygium wilfordii HOM05D005001 ORTHO05D005796 6.4e-160 568.9 790 46.2
Phvul.002G116700 Phaseolus vulgaris HOM05D005001 ORTHO05D005796 1.4e-159 567.8 793 48.2
Aqoxy5G01010 Aquilegia oxysepala HOM05D005001 ORTHO05D005796 1.2e-158 564.7 761 46.8
ClCG10G000290 Citrullus lanatus HOM05D005001 ORTHO05D005796 5.1e-157 559.3 780 45.6
CsaV3_3G000320 Cucumis sativus L. HOM05D005001 ORTHO05D005796 5.1e-157 559.3 782 46.4
TPR.G33869 Trifolium pratense HOM05D005001 ORTHO05D005796 1.1e-154 551.6 762 47.5
CSS0020393 Camellia sinensis var. sinensis HOM05D005001 ORTHO05D005796 3.1e-154 550.1 745 47.5
MD02G1115000 Malus domestica HOM05D005001 ORTHO05D005796 4.5e-153 546.2 769 45.4
Nn6g31704 Nelumbo nucifera HOM05D005001 ORTHO05D005796 9.9e-153 545.0 778 45.2
Psat2g148080 Pisum sativum HOM05D005001 ORTHO05D005796 9.9e-153 545.0 759 47.0
Medtr5g024240 Medicago truncatula HOM05D005001 ORTHO05D005796 6.4e-152 542.3 756 47.0
SalBow3G0770 Salvia bowleyana HOM05D005001 ORTHO05D005796 1.1e-151 541.6 772 44.7
SalBow3G4537 Salvia bowleyana HOM05D005001 ORTHO05D005796 1.1e-151 541.6 772 44.7
Gorai.001G199100 Gossypium raimondii HOM05D005001 ORTHO05D005796 4.2e-151 539.7 856 42.4
TWI53G0117 Tripterygium wilfordii HOM05D005001 ORTHO05D005796 7.9e-150 535.4 733 45.8
Nn5g30991 Nelumbo nucifera HOM05D005001 ORTHO05D005796 1.3e-147 528.1 790 44.7
SalBow5G1781 Salvia bowleyana HOM05D005001 ORTHO05D005796 5.3e-146 522.7 733 46.1
MBI08_g12258_MAGBIO Magnolia biondii HOM05D005001 ORTHO05D005796 1.5e-145 521.2 845 41.4
FAN23G2126 Fragaria x ananassa HOM05D005001 ORTHO05D005796 7.6e-145 518.8 755 44.6
MELO3C013726.2 Cucumis melo HOM05D005001 ORTHO05D005796 1.0e-144 518.5 747 45.6
Nitab4.5_0000495g0110 Nicotiana tabacum HOM05D005001 ORTHO05D005796 3.8e-144 516.5 680 47.8
Sed0016412 Sechium edule HOM05D005001 ORTHO05D005796 1.1e-143 515.0 784 43.9
EL10Ac6g15057 Beta vulgaris HOM05D005001 ORTHO05D005796 1.2e-142 511.5 787 43.1
Peaxi162Scf00122g02417 Petunia axillaris HOM05D005001 ORTHO05D005796 7.9e-142 508.8 733 45.4
Nitab4.5_0005297g0010 Nicotiana tabacum HOM05D005001 ORTHO05D005796 5.1e-141 506.1 683 47.6
Lalb_Chr05g0214801 Lupinus albus HOM05D005001 ORTHO05D005796 6.7e-141 505.8 770 45.5
Hund03602 Selenicereus undatus HOM05D005001 ORTHO05D005796 3.7e-139 500.0 852 40.3
AUR62003748 Chenopodium quinoa HOM05D005001 ORTHO05D005796 1.0e-136 491.9 834 40.0
AUR62002047 Chenopodium quinoa HOM05D005001 ORTHO05D005796 1.7e-136 491.1 837 40.0
Glyma.16G116100 Glycine max HOM05D005001 ORTHO05D005796 1.1e-135 488.4 768 43.6
PSO761G0634 Papaver somniferum HOM05D005001 ORTHO05D005796 1.1e-135 488.4 820 41.5
PSO210G6136 Papaver somniferum HOM05D005001 ORTHO05D005796 2.5e-135 487.3 821 42.1
PGSC0003DMG400018683 Solanum tuberosum HOM05D005001 ORTHO05D005796 4.2e-135 486.5 768 44.8
Sopen03g005960 Solanum pennellii HOM05D005001 ORTHO05D005796 1.0e-133 481.9 761 44.3
Glyma.09G198000 Glycine max HOM05D005001 ORTHO05D005796 3.9e-133 479.9 752 43.2
Ah.02g122920 Amaranthus hybridus HOM05D005001 ORTHO05D005796 4.3e-132 476.5 791 42.0
Solyc03g032110.3 Solanum lycopersicum HOM05D005001 ORTHO05D005796 5.7e-132 476.1 761 44.0
Lalb_Chr16g0380031 Lupinus albus HOM05D005001 ORTHO05D005796 1.8e-125 454.5 661 46.4
SGA_v2.0_scaffold41G15753 Striga asiatica HOM05D005001 ORTHO05D005796 1.1e-124 451.8 727 44.7
Eucgr.J02537 Eucalyptus grandis HOM05D005001 ORTHO05D005796 1.3e-123 448.4 548 50.2
PGR119G1974 Punica granatum HOM05D005001 ORTHO05D005796 8.2e-123 445.7 734 42.8
VMungo0251G3365 Vigna mungo HOM05D005001 ORTHO05D005796 7.9e-118 429.1 766 41.5
Phvul.003G270200 Phaseolus vulgaris HOM05D005001 ORTHO05D005796 2.3e-117 427.6 768 41.7
THA.LOC104804295 Tarenaya hassleriana HOM05D005001 ORTHO05D005796 7.4e-116 422.5 743 40.6
AT2G17550 Arabidopsis thaliana HOM05D005001 ORTHO05D005796 2.5e-111 407.5 745 39.5
Thhalv10022564m.g Eutrema salsugineum HOM05D005001 ORTHO05D005796 8.0e-110 402.5 753 38.1
AL3G50520 Arabidopsis lyrata HOM05D005001 ORTHO05D005796 5.2e-109 399.8 749 38.6
Carub.0003s3164 Capsella rubella HOM05D005001 ORTHO05D005796 5.2e-109 399.8 753 39.3
C07p05710 Brassica napus HOM05D005001 ORTHO05D005796 1.2e-108 398.7 734 39.1
BolC7t40970H Brassica oleracea HOM05D005001 ORTHO05D005796 1.2e-108 398.7 734 39.1
BcaC06g36289 Brassica carinata HOM05D005001 ORTHO05D005796 2.0e-108 397.9 737 39.3
Sp3g30910 Schrenkiella parvula HOM05D005001 ORTHO05D005796 7.5e-108 396.0 753 38.5
BcaB03g16525 Brassica carinata HOM05D005001 ORTHO05D005796 1.4e-106 391.7 749 38.5
Lj4g0000674 Lotus japonicus HOM05D005001 ORTHO05D005796 1.4e-106 391.7 754 40.2
Gohir.D07G178000 Gossypium hirsutum HOM05D005001 ORTHO05D005796 4.1e-106 390.2 692 40.3
A07p03420 Brassica napus HOM05D005001 ORTHO05D005796 7.0e-106 389.4 739 38.3
BraA07t28140Z Brassica rapa HOM05D005001 ORTHO05D005796 7.0e-106 389.4 739 38.3
Hund19695 Selenicereus undatus HOM05D005001 ORTHO05D005796 7.0e-106 389.4 786 38.8
Gohir.A07G171200 Gossypium hirsutum HOM05D005001 ORTHO05D005796 8.5e-104 382.5 665 40.9
CARHR107730 Cardamine hirsuta HOM05D005001 ORTHO05D005796 3.0e-101 374.0 742 38.4
Sc03g0003960 Simmondsia chinensis HOM05D005001 ORTHO05D005796 1.8e-98 364.8 607 43.3
ATR0807G148 Amborella trichopoda HOM05D005001 ORTHO05D005796 2.4e-98 364.4 741 38.1
Aa31LG8G14850 Aethionema arabicum HOM05D005001 ORTHO05D005796 6.8e-93 346.3 734 37.3
PSO541G4728 Papaver somniferum HOM05D005001 ORTHO05D005796 4.4e-92 343.6 785 35.4
MBI05_g14348_MAGBIO Magnolia biondii HOM05D005001 ORTHO05D005796 1.8e-90 338.2 753 35.2
PSO675G2514 Papaver somniferum HOM05D005001 ORTHO05D005796 2.7e-89 334.3 770 35.2
arahy.Tifrunner.gnm1.ann1.3933SP Arachis hypogaea HOM05D005001 ORTHO05D005796 1.2e-84 318.9 729 35.0
Os03g0130700 Oryza sativa ssp. japonica HOM05D005001 ORTHO05D005796 1.7e-83 315.1 809 33.4
HPP92_007108 Vanilla planifolia HOM05D005001 ORTHO05D005796 1.1e-77 295.8 794 32.2
Zm00001eb002440 Zea mays HOM05D005001 ORTHO05D005796 7.8e-73 279.6 795 31.2
Lj4A237T62 Lonicera japonica HOM05D005001 ORTHO05D005796 1.2e-70 272.3 485 42.1
THA.LOC104819718 Tarenaya hassleriana HOM05D005001 ORTHO05D005796 7.1e-66 256.5 725 33.5
unitig_37.g12434 Utricularia gibba HOM05D005001 ORTHO05D005796 8.4e-43 179.9 300 39.0
arahy.Tifrunner.gnm1.ann1.8C07DS Arachis hypogaea HOM05D005001 ORTHO05D005796 2.4e-42 178.3 565 30.6
Medtr5g025350 Medicago truncatula HOM05D005001 ORTHO05D005796 3.0e-40 171.4 235 47.2
Os06g0728200 Oryza sativa ssp. japonica HOM05D005001 ORTHO05D005796 9.0e-37 159.8 889 27.1
unitig_37.g12435 Utricularia gibba HOM05D005001 ORTHO05D005796 1.4e-34 152.5 309 38.2
HPP92_022688 Vanilla planifolia HOM05D005001 ORTHO05D005796 3.3e-31 141.4 368 32.6
HPP92_022687 Vanilla planifolia HOM05D005001 ORTHO05D005796 6.0e-25 120.6 286 35.0
CDE05G1993 Ceratophyllum demersum HOM05D005001 ORTHO05D005796 5.1e-24 117.5 594 28.6
ECA233G1235 Erigeron canadensis HOM05D015607 ORTHO05D009086 2.2e-22 112.1 63 87.3
CDE05G3420 Ceratophyllum demersum HOM05D005001 ORTHO05D005796 1.4e-21 109.4 500 28.0
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.3e-19 102.8 62 80.6
ECA232G3312 Erigeron canadensis HOM05D000001 ORTHO05D009086 3.8e-19 101.3 56 89.3
ECA236G1359 Erigeron canadensis HOM05D000846 ORTHO05D006755 6.1e-17 94.0 74 68.9
ECA240G4508 Erigeron canadensis HOM05D007602 ORTHO05D009086 7.9e-17 93.6 69 73.9
Medtr5g025380 Medicago truncatula HOM05D005001 ORTHO05D005796 1.4e-16 92.8 128 43.0
Lalb_Chr16g0380041 Lupinus albus HOM05D005001 ORTHO05D005796 3.9e-16 91.3 113 45.1
ECA233G5506 Erigeron canadensis HOM05D015607 ORTHO05D009086 8.8e-16 90.1 52 84.6
ECA246G2446 Erigeron canadensis HOM05D000338 ORTHO05D000704 7.4e-15 87.0 56 76.8
Dinv23669 Davidia involucrata HOM05D005001 ORTHO05D005796 1.7e-14 85.9 151 41.1
ECA238G4181 Erigeron canadensis HOM05D000022 ORTHO05D002153 1.7e-14 85.9 50 84.0
ECA247G3684 Erigeron canadensis HOM05D000942 ORTHO05D000918 2.2e-14 85.5 57 75.4
ECA240G3064 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.8e-14 85.1 51 84.3
ECA246G2323 Erigeron canadensis HOM05D015607 ORTHO05D009086 1.8e-13 82.4 50 84.0
ECA236G4360 Erigeron canadensis HOM05D015607 ORTHO05D009086 2.4e-13 82.0 51 82.4
Thhalv10023126m.g Eutrema salsugineum HOM05D005001 ORTHO05D005796 3.1e-13 81.6 102 42.2
ECA238G3636 Erigeron canadensis HOM05D015607 ORTHO05D009086 4.1e-13 81.3 49 83.7
ECA232G0229 Erigeron canadensis HOM05D000687 ORTHO05D000515 5.3e-13 80.9 46 84.8
SEGI_23141 Sequoiadendron giganteum HOM05D002769 ORTHO05D001913 1.5e-12 79.3 505 25.0
ECA240G2299 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.6e-12 78.6 50 76.0
FAN28G2205 Fragaria x ananassa HOM05D005001 ORTHO05D005796 1.0e-11 76.6 80 51.2
ECA232G0678 Erigeron canadensis HOM05D001716 ORTHO05D005286 1.7e-11 75.9 55 70.9
ECA246G2188 Erigeron canadensis HOM05D000582 ORTHO05D000456 5.0e-11 74.3 45 82.2
ECA233G1730 Erigeron canadensis HOM05D002606 ORTHO05D003016 6.5e-11 73.9 46 82.6
SEGI_29651 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 1.9e-10 72.4 484 24.6
ECA248G0438 Erigeron canadensis HOM05D000038 ORTHO05D000612 4.7e-09 67.8 39 87.2
ECA240G2381 Erigeron canadensis HOM05D000001 ORTHO05D001705 6.1e-09 67.4 44 79.5
Dinv30187 Davidia involucrata HOM05D005001 ORTHO05D005796 1.8e-08 65.9 149 36.9
ECA248G0654 Erigeron canadensis HOM05D000967 ORTHO05D000796 6.7e-08 63.9 39 84.6
Lj4P237T25 Lonicera japonica HOM05D005001 ORTHO05D005796 1.5e-07 62.8 100 43.0
ECA238G3739 Erigeron canadensis HOM05D015607 ORTHO05D009086 2.6e-07 62.0 38 84.2
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 7.4e-07 60.5 40 72.5
SEGI_39803 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 7.4e-07 60.5 239 25.5
ECA248G1194 Erigeron canadensis HOM05D015607 ORTHO05D009086 1.3e-06 59.7 49 63.3
ECA234G4697 Erigeron canadensis HOM05D000760 ORTHO05D000618 2.8e-06 58.5 39 74.4
ECA234G3908 Erigeron canadensis HOM05D000364 ORTHO05D000235 4.8e-06 57.8 43 65.1


User provided reference genes

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