Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.9e-32 142.5 107 100.0
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 3.2e-16 88.6 105 74.3
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 2.3e-14 82.4 107 48.6
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 9.6e-13 77.0 105 62.9
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 1.3e-12 76.6 116 65.5
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 3.7e-12 75.1 106 56.6
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 4.8e-12 74.7 110 66.4
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 4.8e-12 74.7 119 63.9
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.2e-12 73.9 104 63.5
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 8.2e-12 73.9 110 63.6
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.1e-11 73.6 108 64.8
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.4e-11 73.2 119 62.2
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.4e-11 73.2 109 67.9
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 1.8e-11 72.8 104 55.8
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.8e-11 72.8 108 61.1
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.8e-11 72.8 108 66.7
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 3.1e-11 72.0 104 70.2
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 3.1e-11 72.0 104 70.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 3.1e-11 72.0 108 68.5
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.0e-11 71.6 108 67.6
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.0e-11 71.6 110 65.5
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 5.3e-11 71.2 110 58.2
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 6.9e-11 70.9 114 64.0
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 6.9e-11 70.9 109 68.8
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 9.0e-11 70.5 110 64.5
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 1.2e-10 70.1 104 61.5
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.2e-10 70.1 109 65.1
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 1.2e-10 70.1 115 64.3
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 1.2e-10 70.1 115 64.3
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.0e-10 69.3 113 56.6
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 2.0e-10 69.3 116 56.9
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 2.0e-10 69.3 109 57.8
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 2.6e-10 68.9 107 64.5
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.6e-10 68.9 115 62.6
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.6e-10 68.9 116 61.2
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 2.6e-10 68.9 108 59.3
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 4.5e-10 68.2 114 63.2
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 4.5e-10 68.2 104 63.5
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 4.5e-10 68.2 117 59.8
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 5.8e-10 67.8 104 64.4
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 5.8e-10 67.8 116 62.1
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 5.8e-10 67.8 116 62.1
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 1.0e-09 67.0 117 59.8
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.0e-09 67.0 116 61.2
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 1.0e-09 67.0 109 61.5
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 1.3e-09 66.6 109 65.1
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 1.7e-09 66.2 105 59.0
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 2.2e-09 65.9 109 62.4
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 2.2e-09 65.9 109 62.4
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 2.2e-09 65.9 109 62.4
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 2.2e-09 65.9 112 62.5
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.2e-09 65.9 109 64.2
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 2.9e-09 65.5 109 61.5
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 2.9e-09 65.5 109 64.2
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 3.8e-09 65.1 109 60.6
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 4.9e-09 64.7 109 61.5
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 4.9e-09 64.7 103 64.1
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 4.9e-09 64.7 94 68.1
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 4.9e-09 64.7 109 65.1
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 4.9e-09 64.7 117 56.4
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.5e-09 64.3 109 60.6
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.5e-09 64.3 109 60.6
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.5e-09 64.3 95 65.3
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 8.4e-09 63.9 109 61.5
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 8.4e-09 63.9 109 63.3
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.1e-08 63.5 107 63.6
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.1e-08 63.5 109 64.2
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.4e-08 63.2 109 62.4
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.9e-08 62.8 109 58.7
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.9e-08 62.8 116 58.6
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.9e-08 62.8 113 56.6
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.5e-08 62.4 116 56.9
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.5e-08 62.4 100 63.0
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.5e-08 62.4 109 60.6
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 2.5e-08 62.4 116 58.6
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 9.3e-08 60.5 116 57.8
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 9.3e-08 60.5 101 57.4
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.2e-07 60.1 114 59.6
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.2e-07 60.1 90 56.7
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.5e-07 58.5 117 58.1
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 3.5e-07 58.5 114 52.6
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 4.6e-07 58.2 116 58.6
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 4.6e-07 58.2 116 59.5
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 4.6e-07 58.2 114 56.1
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 6.0e-07 57.8 101 56.4
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 7.9e-07 57.4 163 46.6
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 1.0e-06 57.0 116 56.9
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.3e-06 56.6 117 57.3
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.8e-06 56.2 117 58.1
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 2.3e-06 55.8 108 50.9
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 3.0e-06 55.5 105 58.1
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 5.1e-06 54.7 111 60.4
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 5.1e-06 54.7 106 61.3
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 5.1e-06 54.7 102 55.9
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 8.7e-06 53.9 116 52.6


User provided reference genes

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