Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0437 Erigeron canadensis HOM05D005223 ORTHO05D006449 2.5e-84 315.5 168 100.0
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 5.9e-41 171.4 218 54.6
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 1.7e-32 143.3 209 48.8
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 5.2e-29 131.7 214 47.7
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 4.0e-21 105.5 218 37.2
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 1.5e-20 103.6 215 38.1
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 1.5e-20 103.6 218 37.2
Cpa.g.sc52.35 Carica papaya HOM05D005223 ORTHO05D006449 2.6e-20 102.8 220 39.5
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 4.4e-20 102.1 221 37.1
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.7e-19 100.1 217 37.3
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 2.2e-19 99.8 221 38.5
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 2.2e-19 99.8 220 37.7
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 2.8e-19 99.4 214 37.9
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 8.3e-19 97.8 221 38.0
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 1.1e-18 97.4 212 38.7
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.1e-18 97.4 217 38.2
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 1.1e-18 97.4 219 37.4
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 1.4e-18 97.1 218 36.7
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 1.4e-18 97.1 220 36.8
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 1.4e-18 97.1 211 38.4
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 1.8e-18 96.7 223 36.8
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 1.8e-18 96.7 214 36.9
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 3.1e-18 95.9 222 36.0
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 3.1e-18 95.9 216 37.0
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 3.1e-18 95.9 220 36.4
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 4.1e-18 95.5 217 36.4
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 7.0e-18 94.7 226 38.1
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 9.2e-18 94.4 217 35.9
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 1.2e-17 94.0 217 36.4
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 1.6e-17 93.6 216 36.6
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 1.6e-17 93.6 212 38.2
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 1.6e-17 93.6 217 35.9
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 2.7e-17 92.8 217 37.3
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 2.7e-17 92.8 224 37.5
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 2.7e-17 92.8 213 37.6
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 2.7e-17 92.8 221 35.7
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 3.5e-17 92.4 220 36.8
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 4.5e-17 92.0 221 36.7
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 4.5e-17 92.0 220 36.4
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 4.5e-17 92.0 218 35.3
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 7.7e-17 91.3 213 37.1
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 7.7e-17 91.3 215 37.2
COL.COLO4_09267 Corchorus olitorius HOM05D005223 ORTHO05D006449 1.3e-16 90.5 220 35.5
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 1.3e-16 90.5 219 36.5
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 1.3e-16 90.5 215 37.7
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 1.3e-16 90.5 218 35.3
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 1.7e-16 90.1 216 34.3
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 2.3e-16 89.7 215 38.1
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 2.3e-16 89.7 221 34.4
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 2.3e-16 89.7 212 36.3
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 2.3e-16 89.7 219 36.5
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 2.3e-16 89.7 221 35.7
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 2.9e-16 89.4 219 34.7
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 3.8e-16 89.0 219 33.8
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 3.8e-16 89.0 215 38.1
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 3.8e-16 89.0 214 35.5
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 6.6e-16 88.2 218 34.4
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 8.6e-16 87.8 218 35.8
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 8.6e-16 87.8 219 35.6
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 1.5e-15 87.0 217 33.6
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 1.5e-15 87.0 221 33.9
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 1.5e-15 87.0 218 36.7
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 1.9e-15 86.7 214 35.5
Aa31LG4G17060 Aethionema arabicum HOM05D005223 ORTHO05D006449 2.5e-15 86.3 218 34.9
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 3.3e-15 85.9 228 35.5
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 3.3e-15 85.9 217 34.6
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 3.3e-15 85.9 218 36.7
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 3.3e-15 85.9 224 35.7
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 4.3e-15 85.5 218 33.9
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 4.3e-15 85.5 206 36.9
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 7.3e-15 84.7 218 34.4
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 7.3e-15 84.7 215 36.7
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 9.5e-15 84.3 222 36.5
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 1.2e-14 84.0 219 35.2
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 1.2e-14 84.0 220 34.5
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 1.2e-14 84.0 219 33.8
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 2.1e-14 83.2 218 33.0
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 2.8e-14 82.8 223 34.5
SGA_v2.0_scaffold50G18602 Striga asiatica HOM05D005223 ORTHO05D006449 2.8e-14 82.8 224 35.3
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 3.6e-14 82.4 215 34.4
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 3.6e-14 82.4 215 34.4
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 3.6e-14 82.4 215 34.4
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 3.6e-14 82.4 216 36.1
arahy.Tifrunner.gnm1.ann1.9N92ER Arachis hypogaea HOM05D005223 ORTHO05D006449 4.7e-14 82.0 214 36.0
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 6.1e-14 81.6 208 32.7
Glyma.06G172900 Glycine max HOM05D005223 ORTHO05D006449 6.1e-14 81.6 218 33.5
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 6.1e-14 81.6 211 34.1
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 8.0e-14 81.3 216 35.2
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 8.0e-14 81.3 210 33.8
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 1.0e-13 80.9 216 34.7
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 1.4e-13 80.5 219 32.9
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 1.4e-13 80.5 211 34.6
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 2.3e-13 79.7 216 36.6
SHI10647 Sapria himalayana HOM05D005223 ORTHO05D006449 6.8e-13 78.2 206 34.5
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 2.0e-12 76.6 220 34.5
Os02g0599100 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 2.6e-12 76.3 212 30.7
Os02g0598400 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 3.4e-12 75.9 212 30.7
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 3.4e-12 75.9 212 30.7
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 2.9e-11 72.8 224 31.7
Nn8g40428 Nelumbo nucifera HOM05D005223 ORTHO05D006449 7.8e-09 64.7 53 64.2
SalBow1G1130 Salvia bowleyana HOM05D005223 ORTHO05D006449 3.9e-08 62.4 36 77.8
SalBow1G2179 Salvia bowleyana HOM05D005223 ORTHO05D006449 1.9e-07 60.1 36 75.0
FvH4_5g07361 Fragaria vesca HOM05D005223 ORTHO05D006449 2.5e-07 59.7 34 85.3
SalBow5G3736 Salvia bowleyana HOM05D005223 ORTHO05D006449 9.5e-07 57.8 36 69.4
Actinidia19387 Actinidia chinensis HOM05D005223 ORTHO05D006449 1.2e-06 57.4 63 49.2


User provided reference genes

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