Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0434 Erigeron canadensis HOM05D007894 ORTHO05D009691 7.0e-129 464.2 267 100.0
Lsat_1_v5_gn_3_14101 Lactuca sativa HOM05D007894 ORTHO05D009691 1.7e-74 283.5 267 66.7
Lj8P201T33 Lonicera japonica HOM05D007894 ORTHO05D009691 7.6e-59 231.5 272 54.8
HanXRQChr03g0086121 Helianthus annuus HOM05D007894 ORTHO05D009691 4.9e-58 228.8 268 56.7
TAR629G0466 Trochodendron aralioides HOM05D007894 ORTHO05D009691 2.1e-48 196.8 276 50.0
Nitab4.5_0004251g0020 Nicotiana tabacum HOM05D007894 ORTHO05D009691 1.3e-47 194.1 270 47.4
Nitab4.5_0007063g0010 Nicotiana tabacum HOM05D007894 ORTHO05D009691 1.3e-47 194.1 275 47.3
PGSC0003DMG400012120 Solanum tuberosum HOM05D007894 ORTHO05D009691 5.1e-47 192.2 270 47.8
Haze_09166 Corylus avellana HOM05D007894 ORTHO05D009691 1.5e-46 190.7 273 46.2
DCAR_006541 Daucus carota HOM05D007894 ORTHO05D009691 1.9e-46 190.3 269 46.8
MD14G1125500 Malus domestica HOM05D007894 ORTHO05D009691 3.3e-46 189.5 279 47.7
Peaxi162Scf00074g00316 Petunia axillaris HOM05D007894 ORTHO05D009691 4.3e-46 189.1 271 48.7
Dinv12925 Davidia involucrata HOM05D007894 ORTHO05D009691 1.3e-45 187.6 249 48.6
Oeu043316.1 Olea europaea HOM05D007894 ORTHO05D009691 1.3e-45 187.6 267 46.8
Prupe.5G129000 Prunus persica HOM05D007894 ORTHO05D009691 2.8e-45 186.4 276 45.3
Aa31LG6G7360 Aethionema arabicum HOM05D007894 ORTHO05D009691 1.1e-44 184.5 263 48.7
MD06G1117900 Malus domestica HOM05D007894 ORTHO05D009691 1.1e-44 184.5 269 48.0
Sopen08g031270 Solanum pennellii HOM05D007894 ORTHO05D009691 1.4e-44 184.1 264 46.2
MSTRG.12199 Avicennia marina HOM05D007894 ORTHO05D009691 2.4e-44 183.3 265 47.2
FvH4_5g10980 Fragaria vesca HOM05D007894 ORTHO05D009691 2.4e-44 183.3 272 46.0
FAN18G0782 Fragaria x ananassa HOM05D007894 ORTHO05D009691 2.4e-44 183.3 272 46.0
FAN13G0186 Fragaria x ananassa HOM05D007894 ORTHO05D009691 3.1e-44 183.0 275 46.5
Aqoxy7G00025 Aquilegia oxysepala HOM05D007894 ORTHO05D009691 4.1e-44 182.6 265 45.7
RcHm_v2.0_Chr7g0186841 Rosa chinensis HOM05D007894 ORTHO05D009691 4.1e-44 182.6 277 47.3
RcHm_v2.0_Chr7g0186241 Rosa chinensis HOM05D007894 ORTHO05D009691 5.3e-44 182.2 275 46.5
Cfa011931 Carpinus fangiana HOM05D007894 ORTHO05D009691 9.0e-44 181.4 275 45.1
FAN08G2177 Fragaria x ananassa HOM05D007894 ORTHO05D009691 3.4e-43 179.5 281 45.2
Atru.chr9.1896 Acer truncatum HOM05D007894 ORTHO05D009691 1.7e-42 177.2 274 42.7
FAN04G2047 Fragaria x ananassa HOM05D007894 ORTHO05D009691 2.9e-42 176.4 272 45.2
TWI81G0638 Tripterygium wilfordii HOM05D007894 ORTHO05D009691 5.0e-42 175.6 269 46.5
COL.COLO4_10790 Corchorus olitorius HOM05D007894 ORTHO05D009691 8.5e-42 174.9 270 43.7
Sp7g22070 Schrenkiella parvula HOM05D007894 ORTHO05D009691 1.1e-41 174.5 265 46.0
A01p15370 Brassica napus HOM05D007894 ORTHO05D009691 9.4e-41 171.4 269 49.4
CiPaw.11G113300 Carya illinoinensis HOM05D007894 ORTHO05D009691 1.6e-40 170.6 287 42.9
Ciclev10021739m.g Citrus clementina HOM05D007894 ORTHO05D009691 2.7e-40 169.9 275 44.4
Sed0027072 Sechium edule HOM05D007894 ORTHO05D009691 2.7e-40 169.9 276 44.9
MBI12_g30970_MAGBIO Magnolia biondii HOM05D007894 ORTHO05D009691 3.6e-40 169.5 279 43.4
Nn3g18883 Nelumbo nucifera HOM05D007894 ORTHO05D009691 3.6e-40 169.5 281 45.9
PGR042G1438 Punica granatum HOM05D007894 ORTHO05D009691 4.6e-40 169.1 288 43.1
CANSAT21G2064 Cannabis sativa HOM05D007894 ORTHO05D009691 6.1e-40 168.7 278 48.2
MELO3C005782.2 Cucumis melo HOM05D007894 ORTHO05D009691 1.4e-39 167.5 262 49.2
Manes.02G003300 Manihot esculenta HOM05D007894 ORTHO05D009691 2.3e-39 166.8 274 44.5
BcaNung01115 Brassica carinata HOM05D007894 ORTHO05D009691 3.0e-39 166.4 269 44.2
QL02p028226 Quercus lobata HOM05D007894 ORTHO05D009691 3.9e-39 166.0 283 46.6
BcaC09g50910 Brassica carinata HOM05D007894 ORTHO05D009691 5.1e-39 165.6 272 47.4
CsaV3_5G001720 Cucumis sativus L. HOM05D007894 ORTHO05D009691 1.5e-38 164.1 262 48.5
Thecc.03G221700 Theobroma cacao HOM05D007894 ORTHO05D009691 2.5e-38 163.3 276 43.1
C01p19320 Brassica napus HOM05D007894 ORTHO05D009691 3.3e-38 162.9 266 47.4
BolC1t01858H Brassica oleracea HOM05D007894 ORTHO05D009691 3.3e-38 162.9 266 47.4
Thhalv10026087m.g Eutrema salsugineum HOM05D007894 ORTHO05D009691 4.3e-38 162.5 268 46.3
THA.LOC104815238 Tarenaya hassleriana HOM05D007894 ORTHO05D009691 7.4e-38 161.8 270 44.8
ClCG01G001550 Citrullus lanatus HOM05D007894 ORTHO05D009691 2.2e-37 160.2 260 47.7
CARHR231510 Cardamine hirsuta HOM05D007894 ORTHO05D009691 3.7e-37 159.5 276 45.7
Cpa.g.sc175.21 Carica papaya HOM05D007894 ORTHO05D009691 8.2e-37 158.3 255 44.3
PSO170G2911 Papaver somniferum HOM05D007894 ORTHO05D009691 5.3e-36 155.6 286 47.6
Sc16g0010770 Simmondsia chinensis HOM05D007894 ORTHO05D009691 5.3e-36 155.6 283 42.0
CiPaw.12G077900 Carya illinoinensis HOM05D007894 ORTHO05D009691 6.9e-36 155.2 295 44.1
Carub.0007s1699 Capsella rubella HOM05D007894 ORTHO05D009691 2.0e-35 153.7 274 44.2
Duzib084G0115 Durio zibethinus HOM05D007894 ORTHO05D009691 2.0e-35 153.7 254 42.5
AT4G24110 Arabidopsis thaliana HOM05D007894 ORTHO05D009691 1.0e-34 151.4 268 43.7
Gohir.A12G239800 Gossypium hirsutum HOM05D007894 ORTHO05D009691 3.8e-34 149.4 255 42.0
AL7G29180 Arabidopsis lyrata HOM05D007894 ORTHO05D009691 1.4e-33 147.5 271 48.0
Gorai.008G258200 Gossypium raimondii HOM05D007894 ORTHO05D009691 2.1e-32 143.7 255 42.0
Gohir.D12G241000 Gossypium hirsutum HOM05D007894 ORTHO05D009691 2.7e-32 143.3 255 42.7
Potri.001G082500 Populus trichocarpa HOM05D007894 ORTHO05D009691 2.6e-30 136.7 282 40.8
Migut.O00947 Erythranthe guttata HOM05D007894 ORTHO05D009691 1.3e-29 134.4 230 49.6
Solyc08g083050.1 Solanum lycopersicum HOM05D007894 ORTHO05D009691 1.7e-29 134.0 265 39.6
Potri.003G147800 Populus trichocarpa HOM05D007894 ORTHO05D009691 6.3e-29 132.1 279 40.1
Sabra03G0106300 Salix brachista HOM05D007894 ORTHO05D009691 2.4e-28 130.2 267 39.7
Sabra03G0107400 Salix brachista HOM05D001294 ORTHO05D009691 2.4e-28 130.2 258 40.7
Gohir.D08G123100 Gossypium hirsutum HOM05D007894 ORTHO05D009691 4.5e-27 125.9 255 39.2
Gorai.004G129900 Gossypium raimondii HOM05D007894 ORTHO05D009691 4.5e-27 125.9 255 39.2
Gohir.A08G110200 Gossypium hirsutum HOM05D007894 ORTHO05D009691 1.3e-26 124.4 259 39.0
Ah.03g148140 Amaranthus hybridus HOM05D007894 ORTHO05D009691 2.1e-24 117.1 269 33.8
PSO017G1799 Papaver somniferum HOM05D007894 ORTHO05D009691 9.7e-22 108.2 183 48.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 8.2e-21 105.1 213 42.7
Actinidia22204 Actinidia chinensis HOM05D007894 ORTHO05D009691 7.2e-17 92.0 94 56.4
Zm00001eb000900 Zea mays HOM05D019640 ORTHO05D009691 6.1e-16 89.0 274 31.4
Lj6g0022493 Lotus japonicus HOM05D007894 ORTHO05D009691 3.7e-13 79.7 287 29.6
CDE04G0050 Ceratophyllum demersum HOM05D000458 ORTHO05D000951 5.9e-11 72.4 236 28.0
FAN10G4307 Fragaria x ananassa HOM05D007894 ORTHO05D009691 1.3e-10 71.2 96 45.8
unitig_62.g23646 Utricularia gibba HOM05D007894 ORTHO05D009691 2.5e-09 67.0 69 53.6
Gorai.004G159900 Gossypium raimondii HOM05D001555 ORTHO05D001616 1.2e-08 64.7 115 39.1
Oeu042615.1 Olea europaea HOM05D040519 ORTHO05D009691 2.1e-08 63.9 121 38.8
Gohir.D08G154000 Gossypium hirsutum HOM05D001555 ORTHO05D001616 2.7e-08 63.5 118 39.8
CDE12G0970 Ceratophyllum demersum HOM05D007894 ORTHO05D009691 4.7e-08 62.8 173 28.9
SEGI_01002 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 8.0e-08 62.0 144 31.9
TAR375G0826 Trochodendron aralioides HOM05D001555 ORTHO05D001616 1.0e-07 61.6 106 37.7
HPP92_007394 Vanilla planifolia HOM05D007894 ORTHO05D009691 1.4e-07 61.2 146 37.0
ATR0620G121 Amborella trichopoda HOM05D007894 ORTHO05D009691 2.3e-07 60.5 132 34.8
SEGI_23142 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 4.0e-07 59.7 139 31.7
Nitab4.5_0000200g0140 Nicotiana tabacum HOM05D001555 ORTHO05D001616 6.8e-07 58.9 129 36.4
Dinv32516 Davidia involucrata HOM05D001555 ORTHO05D001616 8.8e-07 58.5 126 35.7
A10p00480 Brassica napus HOM05D004139 ORTHO05D004873 1.5e-06 57.8 149 32.2
Nn1g01663 Nelumbo nucifera HOM05D001555 ORTHO05D001616 1.5e-06 57.8 90 41.1
unitig_62.g23645 Utricularia gibba HOM05D007894 ORTHO05D009691 1.5e-06 57.8 83 48.2
MD01G1070200 Malus domestica HOM05D001555 ORTHO05D001616 2.0e-06 57.4 102 39.2
Oeu042611.1 Olea europaea HOM05D040519 ORTHO05D009691 2.0e-06 57.4 116 37.9
Oeu042616.1 Olea europaea HOM05D040519 ORTHO05D009691 2.0e-06 57.4 116 37.9
ClCG05G001280 Citrullus lanatus HOM05D001555 ORTHO05D001616 2.6e-06 57.0 128 33.6
CsaV3_3G008640 Cucumis sativus L. HOM05D001555 ORTHO05D001616 3.4e-06 56.6 128 33.6
GSVIVG01026960001 Vitis vinifera HOM05D001555 ORTHO05D001616 4.4e-06 56.2 110 39.1
BcaB03g13588 Brassica carinata HOM05D001555 ORTHO05D001616 5.7e-06 55.8 108 38.0
C05p00510 Brassica napus HOM05D004139 ORTHO05D004873 5.7e-06 55.8 108 38.0
BraA10t42327Z Brassica rapa HOM05D004139 ORTHO05D004873 5.7e-06 55.8 108 38.0
TAR374G0688 Trochodendron aralioides HOM05D001414 ORTHO05D000619 5.7e-06 55.8 106 35.8
RcHm_v2.0_Chr1g0357581 Rosa chinensis HOM05D001555 ORTHO05D001616 7.5e-06 55.5 102 39.2


User provided reference genes

Program Settings