Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 4.3e-74 281.2 138 100.0
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 8.8e-43 177.2 144 65.3
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 5.0e-38 161.4 139 58.3
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 5.5e-37 157.9 123 64.2
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 1.2e-36 156.8 123 63.4
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 2.7e-36 155.6 142 59.9
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 1.2e-31 140.2 137 54.7
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 1.6e-31 139.8 142 51.4
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 2.7e-31 139.0 139 56.1
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 3.5e-31 138.7 143 52.4
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 3.5e-31 138.7 143 52.4
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 1.3e-30 136.7 139 51.8
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.5e-29 133.3 136 51.5
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.5e-29 133.3 136 47.8
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 1.9e-29 132.9 131 51.1
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.5e-29 132.5 135 49.6
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 2.5e-29 132.5 136 52.9
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 3.3e-29 132.1 136 52.9
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 7.2e-29 131.0 135 51.9
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 1.6e-28 129.8 95 64.2
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 3.6e-28 128.6 141 49.6
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 4.7e-28 128.3 139 50.4
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 4.7e-28 128.3 136 50.0
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 4.7e-28 128.3 139 51.1
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 6.1e-28 127.9 135 48.9
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 6.1e-28 127.9 141 47.5
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 8.0e-28 127.5 143 50.3
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 1.0e-27 127.1 136 50.7
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 2.3e-27 125.9 138 50.0
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 3.0e-27 125.6 121 55.4
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 3.0e-27 125.6 133 48.9
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 3.0e-27 125.6 140 50.7
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 3.0e-27 125.6 134 53.0
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 5.2e-27 124.8 145 48.3
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 5.2e-27 124.8 137 49.6
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 6.8e-27 124.4 145 47.6
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 6.8e-27 124.4 102 61.8
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 8.9e-27 124.0 128 50.0
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 1.2e-26 123.6 147 46.9
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 1.5e-26 123.2 132 53.0
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 2.6e-26 122.5 94 64.9
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 2.6e-26 122.5 131 48.9
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.6e-26 122.5 132 50.0
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.6e-26 122.5 131 48.9
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 2.6e-26 122.5 133 51.9
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 2.6e-26 122.5 127 54.3
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 3.4e-26 122.1 94 62.8
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 4.4e-26 121.7 137 48.9
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 4.4e-26 121.7 137 49.6
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 7.5e-26 120.9 124 53.2
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 9.8e-26 120.6 113 56.6
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 9.8e-26 120.6 120 55.0
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 1.7e-25 119.8 129 48.8
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 2.2e-25 119.4 112 55.4
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 2.2e-25 119.4 135 46.7
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 4.9e-25 118.2 112 54.5
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 8.3e-25 117.5 140 47.1
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 1.1e-24 117.1 102 57.8
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.1e-24 117.1 119 55.5
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 1.1e-24 117.1 121 50.4
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 1.4e-24 116.7 103 59.2
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 1.4e-24 116.7 96 61.5
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.4e-24 116.7 126 53.2
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 1.8e-24 116.3 127 48.8
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 1.8e-24 116.3 96 59.4
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 2.4e-24 115.9 130 52.3
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 2.4e-24 115.9 115 58.3
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 2.4e-24 115.9 115 58.3
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 2.4e-24 115.9 115 58.3
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 2.4e-24 115.9 105 59.0
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 2.4e-24 115.9 95 61.1
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 3.2e-24 115.5 103 61.2
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 4.1e-24 115.2 132 47.7
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 4.1e-24 115.2 134 46.3
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 5.4e-24 114.8 138 46.4
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 5.4e-24 114.8 102 59.8
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 7.0e-24 114.4 113 54.9
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 7.0e-24 114.4 100 58.0
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 7.0e-24 114.4 100 58.0
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 7.0e-24 114.4 90 63.3
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 9.2e-24 114.0 113 54.9
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 9.2e-24 114.0 113 54.9
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 9.2e-24 114.0 85 67.1
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 9.2e-24 114.0 138 44.2
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 1.2e-23 113.6 100 58.0
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 1.2e-23 113.6 102 56.9
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.2e-23 113.6 131 45.8
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 1.6e-23 113.2 133 47.4
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 2.0e-23 112.8 87 62.1
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 2.0e-23 112.8 108 53.7
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 2.0e-23 112.8 138 47.1
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 2.7e-23 112.5 142 44.4
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 3.5e-23 112.1 137 43.1
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 5.9e-23 111.3 87 62.1
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 5.9e-23 111.3 134 45.5
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 1.0e-22 110.5 87 59.8
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 2.3e-22 109.4 80 63.8
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 2.3e-22 109.4 129 51.2
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 5.0e-22 108.2 127 49.6
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.1e-21 107.1 95 55.8
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 1.9e-21 106.3 84 61.9
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 4.3e-21 105.1 151 41.1
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 5.6e-21 104.8 85 58.8
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 5.6e-21 104.8 80 61.2
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 7.3e-21 104.4 128 43.8
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 7.3e-21 104.4 128 43.8
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 7.3e-21 104.4 89 57.3
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 7.3e-21 104.4 60 71.7
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 1.2e-20 103.6 136 44.9
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 2.8e-20 102.4 91 54.9
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 3.6e-20 102.1 62 69.4
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 4.7e-20 101.7 89 56.2
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 6.1e-20 101.3 60 71.7
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 1.8e-19 99.8 63 73.0
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 1.8e-19 99.8 189 38.1
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 5.2e-19 98.2 137 45.3
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 6.8e-19 97.8 106 51.9
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 2.0e-18 96.3 111 50.5
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 2.0e-18 96.3 128 44.5
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 2.0e-18 96.3 89 55.1
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 3.4e-18 95.5 153 42.5
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 7.5e-18 94.4 62 67.7
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 1.4e-16 90.1 111 47.7
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 1.4e-16 90.1 111 47.7
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 2.4e-16 89.4 169 33.7
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 4.1e-16 88.6 55 67.3
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 1.2e-15 87.0 112 49.1
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 6.0e-15 84.7 108 48.1
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.3e-14 83.6 134 38.1
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 3.0e-14 82.4 50 64.0
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 5.0e-14 81.6 39 87.2
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 5.0e-14 81.6 111 45.9
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 1.5e-13 80.1 52 61.5
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 2.5e-13 79.3 90 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 1.2e-12 77.0 61 60.7
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 2.1e-12 76.3 113 44.2
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 8.1e-12 74.3 44 75.0
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 1.1e-11 73.9 49 63.3
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 8.9e-11 70.9 63 58.7
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 1.5e-10 70.1 37 83.8
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.7e-09 66.6 150 32.7
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 2.9e-09 65.9 37 73.0
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 3.2e-08 62.4 37 75.7
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 7.1e-08 61.2 47 59.6
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 9.2e-08 60.8 104 40.4
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 3.0e-06 55.8 51 45.1


User provided reference genes

Program Settings