Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.7e-91 338.2 171 100.0
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 5.4e-66 254.6 176 78.4
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.0e-60 236.1 174 74.1
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.1e-49 199.5 127 77.2
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.5e-49 198.7 172 62.8
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 1.0e-48 197.2 114 80.7
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.7e-48 196.4 172 62.2
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.1e-47 193.7 143 66.4
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.1e-47 193.7 114 80.7
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.9e-47 193.0 114 79.8
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 3.3e-47 192.2 170 61.8
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 9.6e-47 190.7 135 71.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.6e-46 189.9 130 73.8
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 1.6e-46 189.9 115 80.9
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 2.1e-46 189.5 137 70.1
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.8e-46 189.1 142 67.6
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 6.2e-46 188.0 120 76.7
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 8.1e-46 187.6 153 65.4
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 8.1e-46 187.6 156 60.9
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 8.1e-46 187.6 151 62.9
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 8.1e-46 187.6 184 60.3
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.1e-45 187.2 153 64.7
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 1.1e-45 187.2 174 59.2
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.4e-45 186.8 142 69.0
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.8e-45 186.4 166 60.2
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 1.8e-45 186.4 136 70.6
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 3.1e-45 185.7 120 73.3
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 5.2e-45 184.9 134 70.1
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 8.9e-45 184.1 166 60.2
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 8.9e-45 184.1 143 65.0
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 8.9e-45 184.1 119 73.9
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.2e-44 183.7 131 68.7
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.0e-44 183.0 119 73.1
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 2.0e-44 183.0 139 66.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 2.6e-44 182.6 130 70.0
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.6e-44 182.6 119 73.1
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 2.6e-44 182.6 138 66.7
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 3.4e-44 182.2 113 77.0
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.4e-44 182.2 115 75.7
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 3.4e-44 182.2 116 74.1
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 4.4e-44 181.8 187 54.5
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 4.4e-44 181.8 177 55.9
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 4.4e-44 181.8 115 76.5
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 4.4e-44 181.8 143 64.3
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 4.4e-44 181.8 126 69.0
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 4.4e-44 181.8 108 78.7
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 5.8e-44 181.4 114 77.2
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 7.6e-44 181.0 122 73.8
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 9.9e-44 180.6 112 76.8
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.3e-43 180.3 118 70.3
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 2.2e-43 179.5 115 73.9
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 2.2e-43 179.5 154 60.4
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 2.2e-43 179.5 140 63.6
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.9e-43 179.1 127 67.7
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 3.8e-43 178.7 155 59.4
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 4.9e-43 178.3 167 57.5
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 4.9e-43 178.3 175 57.1
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 6.4e-43 177.9 153 60.8
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 8.4e-43 177.6 121 69.4
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 8.4e-43 177.6 151 61.6
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 1.4e-42 176.8 119 71.4
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.4e-42 176.8 115 73.9
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 1.4e-42 176.8 117 74.4
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 1.4e-42 176.8 117 75.2
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 1.4e-42 176.8 117 75.2
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.4e-42 176.8 161 61.5
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.4e-42 176.8 180 57.2
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.9e-42 176.4 117 73.5
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.9e-42 176.4 160 58.8
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 2.4e-42 176.0 154 61.0
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 2.4e-42 176.0 143 62.9
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 3.2e-42 175.6 115 73.9
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 3.2e-42 175.6 157 61.8
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 4.2e-42 175.3 119 73.9
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 4.2e-42 175.3 119 73.9
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 5.4e-42 174.9 174 57.5
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 5.4e-42 174.9 119 73.9
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 5.4e-42 174.9 117 74.4
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 5.4e-42 174.9 117 74.4
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 5.4e-42 174.9 148 60.8
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 5.4e-42 174.9 166 57.2
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 7.1e-42 174.5 150 58.7
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.2e-41 173.7 162 55.6
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.2e-41 173.7 175 55.4
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 3.5e-41 172.2 157 59.9
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 4.6e-41 171.8 117 70.1
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 7.8e-41 171.0 155 58.1
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.3e-40 170.2 144 60.4
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.3e-40 169.5 114 70.2
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 3.0e-40 169.1 155 58.1
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.0e-40 169.1 142 62.0
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-40 168.7 142 62.0
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-40 168.7 138 63.8
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-40 168.7 138 63.8
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-40 168.7 142 62.0
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 5.1e-40 168.3 141 61.7
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.5e-39 166.8 107 76.6
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 1.6e-38 163.3 134 63.4
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 2.8e-38 162.5 115 63.5
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 5.3e-37 158.3 121 65.3
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 6.9e-37 157.9 146 58.2
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.2e-36 157.1 118 64.4
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 4.4e-36 155.2 102 73.5
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 2.2e-35 152.9 113 67.3
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 5.4e-34 148.3 109 62.4
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 1.7e-32 143.3 101 68.3
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.7e-32 143.3 155 56.8
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 2.3e-32 142.9 92 73.9
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 5.1e-32 141.7 116 56.9
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 1.9e-31 139.8 114 59.6
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 3.3e-31 139.0 152 50.7
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 7.3e-31 137.9 95 70.5
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.4e-29 132.9 98 67.3
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 2.4e-29 132.9 124 56.5
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 3.1e-29 132.5 111 55.9
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 3.1e-29 132.5 111 52.3
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.6e-28 129.4 117 59.8
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 7.6e-28 127.9 141 50.4
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.5e-20 103.6 120 45.0
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.9e-15 86.7 100 50.0
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 8.2e-14 81.3 136 38.2
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.1e-13 80.9 58 72.4
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.1e-09 66.6 61 52.5
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 8.7e-08 61.2 81 45.7
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 8.2e-06 54.7 63 50.8


User provided reference genes

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