Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 8.0e-124 447.2 243 100.0
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 3.0e-94 349.0 196 89.8
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.1e-93 347.1 192 92.7
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.5e-87 325.5 199 86.4
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 4.6e-87 325.1 189 90.5
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 6.0e-87 324.7 191 87.4
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 7.9e-87 324.3 191 85.9
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.3e-86 323.6 191 86.4
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.3e-86 323.6 187 87.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.8e-86 323.2 196 85.2
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 2.3e-86 322.8 190 85.8
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 3.0e-86 322.4 191 87.4
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.9e-86 322.0 191 85.9
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 3.9e-86 322.0 194 85.1
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 3.9e-86 322.0 191 87.4
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.9e-86 322.0 196 84.7
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 5.1e-86 321.6 189 86.8
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 6.7e-86 321.2 196 84.2
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 8.7e-86 320.9 187 86.6
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 8.7e-86 320.9 191 86.4
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 8.7e-86 320.9 194 85.1
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.1e-85 320.5 191 87.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.1e-85 320.5 191 86.9
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.5e-85 320.1 190 86.8
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.5e-85 320.1 196 84.2
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.9e-85 319.7 195 82.6
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 2.5e-85 319.3 191 85.3
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 2.5e-85 319.3 191 84.8
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.5e-85 319.3 188 86.2
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 4.3e-85 318.5 192 87.0
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 4.3e-85 318.5 191 84.8
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 5.6e-85 318.2 187 88.8
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 5.6e-85 318.2 197 81.7
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 9.6e-85 317.4 191 85.3
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 9.6e-85 317.4 191 86.4
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 9.6e-85 317.4 191 86.9
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.3e-84 317.0 192 86.5
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.3e-84 317.0 191 84.3
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.3e-84 317.0 191 84.3
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.6e-84 316.6 197 81.2
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.1e-84 316.2 199 81.4
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 4.8e-84 315.1 191 84.8
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 4.8e-84 315.1 190 83.2
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 4.8e-84 315.1 197 82.7
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 4.8e-84 315.1 191 86.9
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 4.8e-84 315.1 189 85.2
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 6.2e-84 314.7 191 86.9
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 8.1e-84 314.3 188 87.2
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 8.1e-84 314.3 197 84.3
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 8.1e-84 314.3 192 82.3
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.1e-83 313.9 189 84.1
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.1e-83 313.9 189 86.8
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.8e-83 313.2 197 81.2
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.8e-83 313.2 189 84.7
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.4e-83 312.8 189 84.7
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.4e-83 312.8 199 80.9
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.1e-83 312.4 191 82.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 3.1e-83 312.4 197 82.2
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 4.0e-83 312.0 191 83.8
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 5.3e-83 311.6 188 84.0
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 5.3e-83 311.6 190 82.1
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 5.3e-83 311.6 198 79.8
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 6.9e-83 311.2 191 83.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 6.9e-83 311.2 190 83.7
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 9.0e-83 310.8 195 82.6
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 9.0e-83 310.8 188 84.6
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.2e-82 310.5 189 83.6
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.2e-82 310.5 188 82.4
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.5e-82 310.1 191 84.8
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.0e-82 309.7 190 84.7
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 2.0e-82 309.7 195 82.1
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.6e-82 309.3 188 81.9
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 4.5e-82 308.5 191 84.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 5.8e-82 308.1 187 81.3
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 5.8e-82 308.1 188 81.4
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 5.8e-82 308.1 188 81.4
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 5.8e-82 308.1 188 81.4
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 5.8e-82 308.1 188 81.4
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 5.8e-82 308.1 188 83.5
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 7.6e-82 307.8 199 79.9
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 9.9e-82 307.4 198 79.8
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.3e-81 307.0 187 84.0
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.7e-81 306.6 188 82.4
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.7e-81 306.6 195 81.0
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 6.4e-81 304.7 185 84.9
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 2.5e-80 302.8 199 80.9
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 2.5e-80 302.8 190 82.6
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 4.2e-80 302.0 189 82.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 7.1e-80 301.2 188 81.9
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.2e-79 300.4 190 82.6
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.1e-79 299.7 195 83.1
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 7.9e-79 297.7 195 78.5
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 5.1e-78 295.0 189 77.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 6.7e-78 294.7 193 76.2
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 8.7e-78 294.3 195 76.9
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 8.7e-78 294.3 188 79.3
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 8.2e-76 287.7 187 78.1
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.0e-75 284.3 190 75.8
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.1e-71 273.1 190 70.5
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 2.2e-68 263.1 190 74.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 2.4e-67 259.6 190 72.1
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.5e-66 255.4 192 74.5
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 4.5e-66 255.4 191 65.4
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 3.8e-65 252.3 151 84.8
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.2e-63 247.3 192 62.0
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.4e-62 243.8 196 60.7
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 9.7e-53 211.1 199 61.8
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.1e-51 205.7 127 83.5
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.5e-50 203.8 129 81.4
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.9e-48 196.8 129 78.3
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.4e-46 190.7 192 51.6
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 2.3e-46 189.9 185 51.4
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 5.2e-46 188.7 110 85.5
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.1e-45 187.6 182 59.3
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 7.0e-43 178.3 128 70.3
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 6.5e-41 171.8 110 74.5
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.2e-37 161.0 193 45.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.6e-25 118.2 76 80.3
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.3e-24 116.3 76 73.7
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 2.7e-18 96.7 73 68.5
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 9.5e-16 88.2 95 56.8
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-14 84.3 48 83.3
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 2.7e-10 70.1 44 77.3
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.3e-09 67.0 67 58.2
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.1e-08 64.7 44 70.5


User provided reference genes

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