Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 0.0e+00 2268.4 1126 100.0
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 1.6e-206 724.2 1023 46.2
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.2e-174 618.2 1052 42.1
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 7.0e-154 549.3 1131 36.9
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 1.2e-126 458.8 1144 33.4
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.0e-125 455.7 1099 34.9
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.1e-122 445.7 1124 33.9
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 6.6e-120 436.4 1134 33.5
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 1.2e-113 415.6 1183 31.7
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.9e-111 408.3 1118 32.4
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 2.9e-107 394.4 1079 33.2
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 3.7e-107 394.0 1086 34.1
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 7.1e-106 389.8 1083 33.3
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 1.2e-105 389.0 1128 31.8
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.2e-102 379.0 1140 31.5
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 4.7e-102 377.1 1090 32.2
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 2.4e-101 374.8 1118 30.9
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 1.5e-100 372.1 1140 30.2
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 5.8e-100 370.2 1164 31.5
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 1.3e-99 369.0 1128 31.4
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 1.7e-99 368.6 1028 33.9
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 3.8e-99 367.5 1090 32.9
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.4e-98 365.5 1103 31.6
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 3.2e-98 364.4 1085 31.0
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 4.2e-98 364.0 1128 31.3
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 2.1e-97 361.7 1127 31.1
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.0e-96 359.4 996 34.0
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 1.7e-96 358.6 1115 30.1
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 8.7e-96 356.3 1116 30.3
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 6.2e-94 350.1 1198 30.1
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 8.1e-94 349.7 981 33.2
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 4.0e-93 347.4 1003 33.2
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 2.6e-92 344.7 1133 30.3
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 4.4e-92 344.0 1087 31.6
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 7.6e-92 343.2 1107 30.7
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 2.2e-91 341.7 1136 29.9
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 2.4e-90 338.2 900 34.4
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 9.3e-90 336.3 1173 30.6
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 6.0e-89 333.6 995 32.5
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 1.7e-88 332.0 1136 29.3
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.9e-88 330.9 900 33.1
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 1.1e-87 329.3 1118 30.3
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.6e-86 325.5 1182 29.3
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 8.1e-86 323.2 1099 29.8
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 1.1e-85 322.8 1156 30.6
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 9.0e-85 319.7 1105 29.1
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.7e-83 315.5 915 32.0
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 2.9e-83 314.7 1106 28.7
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 5.4e-82 310.5 1105 31.5
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 1.6e-81 308.9 1056 30.3
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 2.1e-81 308.5 1020 30.1
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 2.3e-80 305.1 1134 28.5
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 1.5e-79 302.4 836 31.6
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 1.9e-79 302.0 949 30.3
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 1.2e-76 292.7 1252 27.7
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.3e-75 289.3 1180 28.1
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 4.2e-74 284.3 1042 30.3
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 2.7e-73 281.6 1134 28.3
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 2.5e-66 258.5 1118 28.3
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 1.8e-64 252.3 878 29.3
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 8.7e-64 250.0 1170 26.2
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.6e-62 245.7 310 45.8
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 2.2e-62 245.4 825 29.9
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 4.5e-60 237.7 829 29.7
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 2.1e-57 228.8 527 35.1
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 2.3e-56 225.3 567 29.3
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 1.1e-53 216.5 250 47.2
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 2.5e-50 205.3 1074 25.5
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 1.8e-48 199.1 294 40.5
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 1.1e-45 189.9 818 27.4
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 7.0e-45 187.2 814 26.4
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 5.0e-43 181.0 957 27.1
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.3e-38 166.4 152 51.3
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 4.8e-38 164.5 1025 26.1
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 6.3e-38 164.1 959 25.8
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 6.3e-38 164.1 1029 26.3
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.6e-36 158.7 137 53.3
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 1.9e-34 152.5 996 25.6
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 3.2e-34 151.8 869 26.2
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 8.5e-27 127.1 525 28.6
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 2.5e-26 125.6 118 52.5
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 2.0e-23 115.9 459 27.7
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 9.8e-23 113.6 568 25.4
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 3.7e-22 111.7 829 25.0
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 1.2e-15 90.1 120 40.0
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 2.6e-15 89.0 72 52.8
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 9.2e-13 80.5 62 58.1
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 1.6e-12 79.7 152 31.6
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 5.6e-10 71.2 53 60.4
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 5.2e-08 64.7 51 58.8
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.5e-07 63.2 90 47.8
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 4.4e-07 61.6 67 41.8
Sopen07g024520 Solanum pennellii HOM05D007594 ORTHO05D009607 8.3e-06 57.4 105 40.0


User provided reference genes

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