Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0161 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.3e-136 486.9 247 100.0
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.0e-90 336.3 177 97.7
ECA127G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.0e-90 336.3 177 97.7
ECA327G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.6e-81 304.7 177 91.0
ECA246G0609 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.8e-79 299.3 234 73.5
ECA246G4823 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.7e-74 282.7 173 85.5
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.9e-72 276.6 154 93.5
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 1.7e-65 253.4 179 76.5
HanXRQChr05g0141791 Helianthus annuus HOM05D008488 ORTHO05D000385 5.8e-61 238.4 165 77.6
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.9e-51 206.8 115 94.8
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.4e-51 206.5 177 63.8
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-48 195.3 112 91.1
HanXRQChr14g0434671 Helianthus annuus HOM05D008488 ORTHO05D000385 2.8e-47 193.0 136 76.5
ECA234G1560 Erigeron canadensis HOM05D008488 ORTHO05D000385 4.2e-43 179.1 110 79.1
ECA234G3995 Erigeron canadensis HOM05D008488 ORTHO05D000385 5.4e-43 178.7 110 80.0
ECA247G3403 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.7e-41 171.4 111 76.6
HanXRQChr03g0071501 Helianthus annuus HOM05D008488 ORTHO05D000385 1.6e-39 167.2 112 78.6
ECA233G1871 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.1e-38 162.9 111 80.2
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.1e-32 144.4 172 53.5
HanXRQChr09g0263931 Helianthus annuus HOM05D008488 ORTHO05D000385 1.1e-24 117.9 89 70.8
HanXRQChr04g0111371 Helianthus annuus HOM05D008488 ORTHO05D000385 7.4e-24 115.2 75 78.7
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 7.6e-21 105.1 143 37.1
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 6.5e-20 102.1 68 76.5
HanXRQChr08g0236751 Helianthus annuus HOM05D008488 ORTHO05D000385 3.2e-19 99.8 89 62.9
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.2e-18 97.8 157 43.9
ECA238G1683 Erigeron canadensis HOM05D009718 ORTHO05D000385 1.3e-15 87.8 54 75.9
HanXRQChr09g0254331 Helianthus annuus HOM05D008488 ORTHO05D000385 2.8e-15 86.7 54 79.6
HanXRQChr05g0140711 Helianthus annuus HOM05D008488 ORTHO05D000385 3.7e-15 86.3 53 81.1
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-14 83.2 140 37.9
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.3e-14 82.4 140 37.9
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.0e-14 81.6 140 37.1
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 9.0e-14 81.6 137 35.8
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-13 80.9 112 41.1
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-13 79.7 140 36.4
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.8e-12 76.3 143 32.9
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.8e-12 76.3 143 32.9
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.8e-12 76.3 143 32.9
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.0e-12 75.9 77 41.6
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-12 75.1 140 36.4
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-11 73.9 124 34.7
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 7.2e-11 72.0 170 30.6
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.3e-11 71.6 145 34.5
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.7e-10 70.1 144 31.9
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 3.5e-10 69.7 145 34.5
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 4.6e-10 69.3 146 30.8
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 6.1e-10 68.9 147 34.0
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.9e-10 68.6 144 33.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 7.9e-10 68.6 117 35.0
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 2.3e-09 67.0 126 40.5
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-09 67.0 130 31.5
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 3.9e-09 66.2 140 32.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.1e-09 65.9 151 27.8
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.1e-09 65.9 137 36.5
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.1e-09 65.9 116 36.2
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 5.1e-09 65.9 116 36.2
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.1e-09 65.9 116 36.2
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.1e-09 65.9 116 36.2
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.7e-09 65.5 113 35.4
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.1e-08 64.7 163 33.7
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 1.1e-08 64.7 113 35.4
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 1.1e-08 64.7 161 29.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.9e-08 63.9 140 32.9
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.5e-08 63.5 124 36.3
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.5e-08 63.5 116 35.3
TAR636G2298 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.5e-08 63.5 164 31.1
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 3.3e-08 63.2 135 30.4
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 3.3e-08 63.2 136 29.4
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 4.3e-08 62.8 153 32.7
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 4.3e-08 62.8 164 33.5
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 7.4e-08 62.0 155 32.3
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 7.4e-08 62.0 141 30.5
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 9.7e-08 61.6 156 31.4
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.3e-07 61.2 116 35.3
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 1.6e-07 60.8 168 31.5
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-07 60.8 177 28.2
arahy.Tifrunner.gnm1.ann1.TBML09 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.2e-07 60.5 115 34.8
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-07 60.5 116 34.5
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-07 60.5 122 35.2
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-07 60.1 176 27.8
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.7e-07 59.7 155 32.3
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.7e-07 59.7 130 30.8
RcHm_v2.0_Chr2g0145131 Rosa chinensis HOM05D008315 ORTHO05D009452 3.7e-07 59.7 148 29.1
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-07 59.7 122 32.0
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-07 59.7 116 34.5
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.3e-07 58.9 140 32.9
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 6.3e-07 58.9 158 25.3
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 6.3e-07 58.9 130 31.5
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-06 58.2 120 32.5
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.1e-06 58.2 133 30.8
FAN14G2954 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.4e-06 57.8 153 26.8
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-06 57.8 143 29.4
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-06 57.8 107 35.5
CANSAT64G2013 Cannabis sativa HOM05D008488 ORTHO05D000385 1.8e-06 57.4 113 33.6
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.8e-06 57.4 159 27.7
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.8e-06 57.4 141 30.5
HanXRQChr15g0487911 Helianthus annuus HOM05D008488 ORTHO05D000385 2.4e-06 57.0 37 73.0
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.1e-06 56.2 172 30.8
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 5.3e-06 55.8 149 28.9
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 5.3e-06 55.8 109 31.2
Nitab4.5_0010535g0040 Nicotiana tabacum HOM05D009290 ORTHO05D009597 5.3e-06 55.8 124 33.1
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 6.9e-06 55.5 115 32.2
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 9.0e-06 55.1 138 32.6
Nitab4.5_0001078g0120 Nicotiana tabacum HOM05D009290 ORTHO05D009597 9.0e-06 55.1 142 34.5
SalBow6G1647 Salvia bowleyana HOM05D020395 ORTHO05D010040 9.0e-06 55.1 61 41.0


User provided reference genes

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