Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 0.0e+00 1416.4 707 100.0
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 0.0e+00 1151.7 708 79.8
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 0.0e+00 1114.8 715 78.5
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 1.1e-240 837.0 661 61.0
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 2.3e-235 819.3 690 58.3
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 2.2e-230 802.7 688 57.3
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 9.2e-229 797.3 705 57.9
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 1.3e-227 793.5 687 55.0
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 9.5e-226 787.3 685 56.1
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 3.1e-224 782.3 707 56.2
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 6.8e-224 781.2 692 57.2
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 6.8e-224 781.2 705 55.6
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 8.9e-224 780.8 701 56.2
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 1.6e-220 770.0 693 55.7
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.6e-220 770.0 707 54.5
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 7.8e-220 767.7 690 55.2
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 1.7e-219 766.5 696 54.5
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.7e-219 766.5 690 55.5
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 3.0e-219 765.8 687 54.4
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 7.3e-218 761.1 687 54.9
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 4.0e-216 755.4 700 53.1
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 6.9e-216 754.6 688 53.9
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 2.0e-215 753.1 691 53.3
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 2.6e-215 752.7 693 55.0
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 3.4e-215 752.3 700 54.0
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 1.9e-213 746.5 687 53.6
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 2.4e-213 746.1 713 52.6
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 7.1e-213 744.6 697 52.2
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 1.7e-211 740.0 700 52.3
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 2.3e-211 739.6 693 53.4
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 1.5e-210 736.9 700 53.1
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 2.5e-210 736.1 687 53.1
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 3.3e-210 735.7 686 53.4
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 7.3e-210 734.6 688 53.2
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 1.3e-209 733.8 724 52.5
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 2.6e-207 726.1 690 52.2
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 4.5e-207 725.3 695 51.7
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 1.7e-206 723.4 704 53.0
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 4.9e-206 721.8 641 54.3
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 8.4e-206 721.1 687 52.4
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 2.4e-205 719.5 705 51.3
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 4.6e-204 715.3 727 50.8
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 1.0e-203 714.1 701 51.9
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.8e-203 713.4 690 52.9
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 8.7e-203 711.1 709 52.5
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.1e-201 706.4 716 49.2
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 1.1e-200 704.1 711 50.2
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 4.0e-200 702.2 697 51.6
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.5e-199 700.3 717 50.9
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 9.9e-199 697.6 721 49.9
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 2.9e-198 696.0 852 47.3
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.1e-197 694.1 723 49.9
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 4.2e-197 692.2 718 49.6
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.6e-196 690.3 739 48.2
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 1.6e-196 690.3 706 48.6
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 3.9e-195 685.6 700 49.4
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 8.2e-193 677.9 717 48.1
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 1.4e-192 677.2 706 48.6
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 4.0e-192 675.6 700 49.4
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 2.6e-191 672.9 721 48.7
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 4.9e-190 668.7 692 49.7
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 2.1e-188 663.3 713 48.0
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 3.5e-188 662.5 705 48.7
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 3.5e-188 662.5 695 48.5
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 6.0e-188 661.8 709 48.1
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 1.8e-187 660.2 700 48.9
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 6.7e-187 658.3 697 48.1
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 3.3e-186 656.0 705 47.9
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 2.2e-185 653.3 700 47.9
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 1.8e-184 650.2 767 44.9
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 2.4e-184 649.8 605 53.1
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 1.5e-183 647.1 733 46.5
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 2.1e-180 636.7 704 46.9
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 5.7e-178 628.6 708 46.2
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 6.3e-177 625.2 714 46.2
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 6.9e-176 621.7 696 45.1
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 2.6e-175 619.8 698 47.7
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 4.5e-175 619.0 653 48.2
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.0e-174 617.8 751 44.2
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 3.6e-172 609.4 675 47.9
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 1.5e-170 604.0 696 44.5
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 3.9e-163 579.3 590 52.0
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 1.1e-162 577.8 722 44.3
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 2.5e-157 560.1 691 44.9
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 4.2e-157 559.3 754 42.4
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 9.4e-157 558.1 648 45.7
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 5.0e-142 509.2 571 47.8
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.0e-139 501.5 433 57.7
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 5.0e-134 482.6 474 52.1
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 1.5e-133 481.1 371 59.8
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 6.1e-132 475.7 661 41.9
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 8.3e-129 465.3 454 51.1
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 3.9e-126 456.4 691 37.0
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 3.1e-123 446.8 464 48.3
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 4.0e-115 419.9 597 38.4
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 2.2e-105 387.5 330 57.9
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 3.0e-102 377.1 589 35.3
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 3.2e-96 357.1 532 35.2
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 7.9e-87 325.9 260 56.2
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.1e-80 302.8 350 42.9
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 8.2e-76 289.3 319 48.6
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 9.0e-75 285.8 270 53.7
Sopen03g034830 Solanum pennellii HOM05D004701 ORTHO05D005220 5.5e-64 250.0 225 52.9
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.8e-62 245.0 277 48.4
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 3.7e-60 237.3 296 45.6
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 1.4e-59 235.3 260 44.6
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 6.1e-55 219.9 207 53.6
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 2.2e-49 201.4 198 51.5
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 9.4e-48 196.1 319 34.8
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 3.6e-47 194.1 515 29.7
Ca_14652_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 2.3e-46 191.4 267 38.2
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 3.8e-41 174.1 231 39.4
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla HOM05D004701 ORTHO05D005220 1.6e-39 168.7 158 51.9
Cc00_g08360 Coffea canephora HOM05D004701 ORTHO05D005220 3.6e-39 167.5 157 49.7
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.2e-37 162.5 302 33.1
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.9e-34 150.2 323 28.8
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 7.2e-32 143.3 171 46.2
Lj5A108T60 Lonicera japonica HOM05D004701 ORTHO05D005220 4.7e-31 140.6 131 55.7
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-29 135.6 222 34.2
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.2e-28 131.7 285 29.5
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.8e-28 131.3 186 35.5
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.7e-28 131.0 197 36.0
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 1.2e-26 125.9 88 60.2
Oeu052446.1 Olea europaea HOM05D004701 ORTHO05D005220 3.5e-26 124.4 149 46.3
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.7e-26 123.2 325 27.7
PRCOL_00003726 Prasinoderma coloniale HOM05D004701 ORTHO05D005220 2.9e-25 121.3 313 26.2
SEGI_06018 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 3.3e-24 117.9 143 40.6
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 3.0e-22 111.3 97 63.9
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.0e-22 111.3 160 38.1
MD14G1203300 Malus domestica HOM05D004701 ORTHO05D005220 8.9e-22 109.8 107 50.5
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.9e-22 109.8 222 30.2
Cre02.g118450 Chlamydomonas reinhardtii HOM05D004701 ORTHO05D005220 2.6e-21 108.2 501 23.8
CSS0009827 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.1e-19 102.8 85 55.3
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-19 102.4 139 38.8
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.4e-19 101.7 237 28.7
CSS0002973 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.1e-19 100.9 85 55.3
CSS0048671 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.1e-19 100.9 85 55.3
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-17 96.3 272 27.6
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis HOM05D004701 ORTHO05D005220 2.3e-17 95.1 416 24.3
CSS0034852 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.3e-16 91.3 83 53.0
SGA_v2.0_scaffold313G48342 Striga asiatica HOM05D004701 ORTHO05D005220 1.4e-14 85.9 130 39.2
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 1.8e-14 85.5 76 53.9
Ah.11g048280 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.3e-12 79.3 80 45.0
CSS0011657 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.9e-11 75.5 85 47.1
Oeu052444.1 Olea europaea HOM05D004701 ORTHO05D005220 1.9e-11 75.5 74 44.6
arahy.Tifrunner.gnm1.ann1.4DD1B6 Arachis hypogaea HOM05D004701 ORTHO05D005220 7.0e-11 73.6 135 36.3
Cpa.g.sc3599.1 Carica papaya HOM05D004701 ORTHO05D005220 7.0e-11 73.6 56 57.1
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 9.2e-11 73.2 58 58.6
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.0e-09 67.4 175 28.6
Haze_06050 Corylus avellana HOM05D022078 ORTHO05D024871 1.1e-08 66.2 99 41.4
MELO3C028766.2 Cucumis melo HOM05D001162 ORTHO05D022475 7.3e-08 63.5 46 54.3
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.6e-07 62.4 173 25.4
CSS0027371 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.6e-07 61.2 39 66.7
MBI18_g07590_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D015058 6.2e-07 60.5 49 57.1
CSS0033804 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.4e-06 59.3 36 61.1
CSS0018594 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 5.2e-06 57.4 39 61.5


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