Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.1e-142 510.0 259 100.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 2.3e-105 386.0 264 75.8
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 4.7e-98 361.7 259 71.8
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 2.9e-95 352.4 269 68.4
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.1e-94 350.5 270 68.9
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.2e-94 349.0 264 69.3
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.6e-93 346.7 259 69.1
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.6e-93 346.7 259 69.1
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 7.8e-93 344.4 270 68.1
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 2.3e-92 342.8 274 65.7
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 3.0e-92 342.4 260 68.5
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 3.0e-92 342.4 273 66.3
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 3.0e-92 342.4 256 68.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 5.1e-92 341.7 264 68.2
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 6.6e-92 341.3 267 67.8
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 8.7e-92 340.9 259 69.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.1e-91 340.5 261 68.6
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 1.1e-91 340.5 259 66.8
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.5e-91 340.1 260 68.5
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.5e-91 340.1 259 67.2
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.5e-91 339.3 261 68.6
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 5.6e-91 338.2 259 68.0
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 5.6e-91 338.2 276 65.9
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.6e-90 336.7 274 63.9
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.6e-90 336.7 257 67.3
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.1e-90 336.3 257 68.5
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 3.6e-90 335.5 274 66.1
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.6e-90 335.5 259 64.9
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 6.2e-90 334.7 257 66.9
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 8.1e-90 334.3 259 66.8
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 8.1e-90 334.3 259 64.9
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.1e-89 334.0 257 68.5
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.0e-89 332.0 259 66.4
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.0e-89 332.0 260 66.9
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.0e-89 332.0 260 66.9
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 4.0e-89 332.0 256 64.8
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 4.0e-89 332.0 259 67.6
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 4.0e-89 332.0 245 69.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 9.0e-89 330.9 263 65.0
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 9.0e-89 330.9 258 67.8
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.2e-88 330.5 260 70.4
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.2e-88 330.5 260 65.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.0e-88 329.7 258 66.7
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.0e-88 329.7 260 66.5
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 2.0e-88 329.7 259 68.0
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.6e-88 329.3 258 65.1
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.6e-88 329.3 258 65.5
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.6e-88 329.3 237 71.3
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 5.8e-88 328.2 252 67.5
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 7.6e-88 327.8 257 66.1
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 9.9e-88 327.4 259 64.5
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 9.9e-88 327.4 245 67.8
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.7e-87 326.6 257 65.4
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.2e-87 326.2 263 64.6
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 2.9e-87 325.9 258 65.9
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 3.8e-87 325.5 260 65.8
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 6.4e-87 324.7 260 65.4
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 8.4e-87 324.3 253 66.0
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.4e-86 323.6 257 65.8
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.9e-86 323.2 260 66.2
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.4e-86 322.8 256 66.8
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 5.4e-86 321.6 235 69.8
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 5.4e-86 321.6 296 59.5
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 9.3e-86 320.9 258 65.5
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 6.0e-85 318.2 242 66.9
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.7e-84 316.6 242 66.1
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-84 316.6 256 64.1
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.7e-84 316.6 260 63.5
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 2.3e-84 316.2 257 63.8
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 3.9e-84 315.5 257 64.6
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 3.9e-84 315.5 261 65.9
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 6.6e-84 314.7 236 66.5
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.5e-83 313.5 257 64.6
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 2.5e-83 312.8 268 59.7
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 4.3e-83 312.0 259 62.5
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 5.6e-83 311.6 261 63.2
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 7.3e-83 311.2 259 60.6
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 7.3e-83 311.2 259 63.7
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.6e-82 310.1 236 68.6
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 3.6e-82 308.9 258 62.8
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 6.2e-82 308.1 257 64.6
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 8.1e-82 307.8 261 63.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 8.1e-82 307.8 258 63.6
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 8.1e-82 307.8 240 67.9
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.4e-81 307.0 256 63.3
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 3.1e-81 305.8 258 63.2
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 3.1e-81 305.8 258 63.2
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 4.0e-81 305.4 334 53.0
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 6.9e-81 304.7 259 62.2
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 2.0e-80 303.1 258 62.8
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 2.0e-80 303.1 258 62.8
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 2.6e-80 302.8 236 68.6
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.9e-79 298.5 265 61.1
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.4e-78 297.0 254 62.2
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 4.2e-78 295.4 265 60.4
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.6e-77 293.5 259 61.0
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.7e-77 292.7 247 63.6
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.6e-77 292.0 235 63.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.0e-76 290.8 200 72.5
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.9e-75 286.6 245 61.6
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 7.4e-75 284.6 245 61.6
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 1.6e-74 283.5 212 67.9
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.4e-73 280.4 234 62.0
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 2.4e-73 279.6 261 59.0
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 9.0e-73 277.7 214 68.7
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 2.0e-72 276.6 260 60.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 4.6e-69 265.4 411 42.3
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 6.0e-69 265.0 170 75.9
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 3.9e-68 262.3 234 57.3
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.4e-65 253.8 234 55.1
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 8.4e-63 244.6 220 58.2
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.0e-60 237.7 169 70.4
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 9.7e-59 231.1 202 63.4
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.3e-58 230.7 169 69.2
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 8.2e-58 228.0 239 48.1
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.3e-55 220.7 241 49.0
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.0e-55 218.8 166 68.7
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 6.1e-53 211.8 234 48.7
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.8e-52 210.3 169 68.0
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.8e-52 210.3 241 46.5
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.3e-52 209.9 258 48.1
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 3.9e-52 209.1 237 49.4
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.5e-51 207.2 258 48.1
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 1.8e-49 200.3 234 50.4
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 5.3e-49 198.7 205 56.1
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.3e-49 198.7 234 47.4
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 9.1e-49 198.0 220 53.2
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 4.5e-48 195.7 191 55.5
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.2e-37 161.0 117 68.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 4.2e-30 136.0 122 60.7
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.0e-15 88.2 100 54.0
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 2.6e-11 73.6 157 39.5
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 4.3e-06 56.2 89 41.6


User provided reference genes

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