Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4690 Erigeron canadensis HOM05D005730 ORTHO05D007038 1.0e-37 159.5 73 100.0
HanXRQChr03g0064531 Helianthus annuus HOM05D005730 ORTHO05D007038 5.5e-36 153.7 73 94.5
HanXRQChr09g0243241 Helianthus annuus HOM05D005730 ORTHO05D007038 5.5e-36 153.7 73 94.5
Lsat_1_v5_gn_7_59680 Lactuca sativa HOM05D005730 ORTHO05D007038 9.4e-36 152.9 73 93.2
Phvul.004G177400 Phaseolus vulgaris HOM05D005730 ORTHO05D007038 1.3e-32 142.5 71 87.3
TPR.G21357 Trifolium pratense HOM05D005730 ORTHO05D007038 8.3e-32 139.8 73 84.9
Glyma.07G130200 Glycine max HOM05D005730 ORTHO05D007038 1.4e-31 139.0 71 85.9
Gohir.D03G138800 Gossypium hirsutum HOM05D005730 ORTHO05D007038 1.4e-31 139.0 71 84.5
Gorai.003G145600 Gossypium raimondii HOM05D005730 ORTHO05D007038 1.4e-31 139.0 71 84.5
VMungo0464G0384 Vigna mungo HOM05D002151 ORTHO05D002142 1.4e-31 139.0 71 85.9
Gohir.A03G029700 Gossypium hirsutum HOM05D005730 ORTHO05D007038 2.4e-31 138.3 71 84.5
QL11p009271 Quercus lobata HOM05D005730 ORTHO05D007038 4.1e-31 137.5 71 85.9
Phvul.010G060700 Phaseolus vulgaris HOM05D005730 ORTHO05D007038 7.0e-31 136.7 71 84.5
Eucgr.D02622 Eucalyptus grandis HOM05D005730 ORTHO05D007038 9.1e-31 136.3 71 84.5
CANSAT01G0847 Cannabis sativa HOM05D005730 ORTHO05D007038 1.2e-30 136.0 71 80.3
Cfa020734 Carpinus fangiana HOM05D005730 ORTHO05D007038 1.2e-30 136.0 71 83.1
Ciclev10010105m.g Citrus clementina HOM05D005730 ORTHO05D007038 1.2e-30 136.0 71 81.7
Atru.chr10.916 Acer truncatum HOM05D005730 ORTHO05D007038 2.0e-30 135.2 71 80.3
Atru.chr10.931 Acer truncatum HOM05D005730 ORTHO05D007038 2.0e-30 135.2 71 80.3
PGR142G0999 Punica granatum HOM05D005730 ORTHO05D007038 2.7e-30 134.8 71 83.1
Prupe.1G065800 Prunus persica HOM05D005730 ORTHO05D007038 3.5e-30 134.4 71 81.7
CiPaw.16G103100 Carya illinoinensis HOM05D005730 ORTHO05D007038 4.5e-30 134.0 71 85.9
CsaV3_1G004610 Cucumis sativus L. HOM05D005730 ORTHO05D007038 4.5e-30 134.0 70 87.1
FvH4_4g06270 Fragaria vesca HOM05D005730 ORTHO05D007038 4.5e-30 134.0 71 80.3
FAN12G2290 Fragaria x ananassa HOM05D005730 ORTHO05D007038 4.5e-30 134.0 71 80.3
RcHm_v2.0_Chr4g0397991 Rosa chinensis HOM05D005730 ORTHO05D007038 4.5e-30 134.0 71 80.3
Cc00_g00480 Coffea canephora HOM05D005730 ORTHO05D007038 7.7e-30 133.3 71 81.7
MELO3C017388.2 Cucumis melo HOM05D005730 ORTHO05D007038 7.7e-30 133.3 70 85.7
Actinidia38519 Actinidia chinensis HOM05D005730 ORTHO05D007038 1.0e-29 132.9 71 78.9
Aqoxy7G02690 Aquilegia oxysepala HOM05D005730 ORTHO05D007038 1.0e-29 132.9 71 80.3
Psat1g051120 Pisum sativum HOM05D005730 ORTHO05D007038 1.0e-29 132.9 73 79.5
THA.LOC104815318 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 1.0e-29 132.9 71 81.7
THA.LOC109116496 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 1.0e-29 132.9 71 81.7
THA.LOC109117265 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 1.0e-29 132.9 71 81.7
Thecc.06G194900 Theobroma cacao HOM05D005730 ORTHO05D007038 1.0e-29 132.9 71 80.3
Ah.10g033660 Amaranthus hybridus HOM05D005730 ORTHO05D007038 1.7e-29 132.1 71 76.1
MD16G1239700 Malus domestica HOM05D005730 ORTHO05D007038 1.7e-29 132.1 71 78.9
ClCG06G014030 Citrullus lanatus HOM05D005730 ORTHO05D007038 2.9e-29 131.3 69 82.6
Sc09g0007480 Simmondsia chinensis HOM05D005730 ORTHO05D007038 3.8e-29 131.0 71 80.3
Dinv06659 Davidia involucrata HOM05D005730 ORTHO05D007038 5.0e-29 130.6 71 78.9
AL4G26750 Arabidopsis lyrata HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
AT2G31490 Arabidopsis thaliana HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
BcaC02g07993 Brassica carinata HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
A03p17640 Brassica napus HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
A04p24230 Brassica napus HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
C03p20730 Brassica napus HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
BolC3t14450H Brassica oleracea HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
BolC4t23397H Brassica oleracea HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
BolC4t27587H Brassica oleracea HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
BraA03t11029Z Brassica rapa HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
Carub.0004s1281 Capsella rubella HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
CARHR125130 Cardamine hirsuta HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
Thhalv10017500m.g Eutrema salsugineum HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
Manes.11G087000 Manihot esculenta HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
Sp4g13950 Schrenkiella parvula HOM05D005730 ORTHO05D007038 6.5e-29 130.2 71 77.5
Duzib177G0654 Durio zibethinus HOM05D005730 ORTHO05D007038 8.5e-29 129.8 71 78.9
MD13G1234900 Malus domestica HOM05D005730 ORTHO05D007038 8.5e-29 129.8 71 78.9
Duzib170G0040 Durio zibethinus HOM05D005730 ORTHO05D007038 1.5e-28 129.0 71 78.9
Lj2g0002952 Lotus japonicus HOM05D005730 ORTHO05D007038 1.5e-28 129.0 71 81.7
arahy.Tifrunner.gnm1.ann1.YLZA1F Arachis hypogaea HOM05D005730 ORTHO05D007038 1.9e-28 128.6 71 78.9
RcHm_v2.0_Chr6g0293611 Rosa chinensis HOM05D005730 ORTHO05D007038 1.9e-28 128.6 71 76.1
arahy.Tifrunner.gnm1.ann1.8U1ME7 Arachis hypogaea HOM05D005730 ORTHO05D007038 3.2e-28 127.9 71 78.9
Lalb_Chr14g0361711 Lupinus albus HOM05D005730 ORTHO05D007038 4.2e-28 127.5 71 78.9
Manes.04G088600 Manihot esculenta HOM05D005730 ORTHO05D007038 4.2e-28 127.5 71 76.1
Potri.006G077400 Populus trichocarpa HOM05D005730 ORTHO05D007038 9.4e-28 126.3 71 76.1
TAR383G0493 Trochodendron aralioides HOM05D005730 ORTHO05D007038 1.2e-27 125.9 71 74.6
GSVIVG01029731001 Vitis vinifera HOM05D005730 ORTHO05D007038 1.2e-27 125.9 71 77.5
CSS0014288 Camellia sinensis var. sinensis HOM05D005730 ORTHO05D007038 2.7e-27 124.8 71 74.6
Aa31LG5G7440 Aethionema arabicum HOM05D005730 ORTHO05D007038 3.6e-27 124.4 71 71.8
Nn2g12785 Nelumbo nucifera HOM05D005730 ORTHO05D007038 3.6e-27 124.4 71 74.6
Sed0021240 Sechium edule HOM05D005730 ORTHO05D007038 6.1e-27 123.6 69 79.7
SGA_v2.0_scaffold143G35734 Striga asiatica HOM05D005730 ORTHO05D007038 6.1e-27 123.6 70 78.6
BcaB01g04043 Brassica carinata HOM05D005730 ORTHO05D007038 1.8e-26 122.1 67 76.1
BcaB02g10394 Brassica carinata HOM05D005730 ORTHO05D007038 1.8e-26 122.1 67 76.1
BcaB06g28537 Brassica carinata HOM05D005730 ORTHO05D007038 1.8e-26 122.1 67 76.1
Os01g0750800 Oryza sativa ssp. japonica HOM05D005730 ORTHO05D007038 3.0e-26 121.3 71 74.6
Nitab4.5_0004188g0020 Nicotiana tabacum HOM05D005730 ORTHO05D007038 6.8e-26 120.2 73 71.2
Zm00001eb368480 Zea mays HOM05D005730 ORTHO05D007038 6.8e-26 120.2 71 73.2
CDE06G0649 Ceratophyllum demersum HOM05D005730 ORTHO05D007038 1.2e-25 119.4 71 74.6
Migut.L00209 Erythranthe guttata HOM05D005730 ORTHO05D007038 2.0e-25 118.6 70 72.9
unitig_26.g9132 Utricularia gibba HOM05D005730 ORTHO05D007038 2.6e-25 118.2 70 74.3
Sopen05g027690 Solanum pennellii HOM05D005730 ORTHO05D007038 4.4e-25 117.5 73 71.2
Migut.J00829 Erythranthe guttata HOM05D005730 ORTHO05D007038 7.5e-25 116.7 70 71.4
FAN07G1689 Fragaria x ananassa HOM05D005730 ORTHO05D007038 9.8e-25 116.3 106 53.8
FAN22G1024 Fragaria x ananassa HOM05D005730 ORTHO05D007038 9.8e-25 116.3 106 53.8
Os01g0732100 Oryza sativa ssp. japonica HOM05D005730 ORTHO05D007038 9.8e-25 116.3 71 71.8
RcHm_v2.0_Chr6g0293601 Rosa chinensis HOM05D005730 ORTHO05D007038 9.8e-25 116.3 67 73.1
TWI63G0907 Tripterygium wilfordii HOM05D005730 ORTHO05D007038 6.3e-24 113.6 70 68.6
PSO063G5181 Papaver somniferum HOM05D005730 ORTHO05D007038 8.3e-24 113.2 70 67.1
PSO170G3580 Papaver somniferum HOM05D005730 ORTHO05D007038 1.1e-23 112.8 70 67.1
HPP92_021358 Vanilla planifolia HOM05D005730 ORTHO05D007038 1.1e-23 112.8 71 73.2
vmacro20778 Vaccinium macrocarpon HOM05D005730 ORTHO05D007038 9.1e-23 109.8 68 70.6
HanXRQChr13g0388231 Helianthus annuus HOM05D005730 ORTHO05D007038 3.5e-22 107.8 56 87.5
Peaxi162Scf00320g00055 Petunia axillaris HOM05D005730 ORTHO05D007038 3.5e-22 107.8 61 77.0
Zm00001eb370910 Zea mays HOM05D005730 ORTHO05D007038 3.5e-22 107.8 71 69.0
Peaxi162Scf00204g00039 Petunia axillaris HOM05D005730 ORTHO05D007038 5.9e-22 107.1 71 66.2
Hund03236 Selenicereus undatus HOM05D005730 ORTHO05D007038 7.7e-22 106.7 56 83.9
COL.COLO4_33448 Corchorus olitorius HOM05D005730 ORTHO05D007038 1.3e-21 105.9 56 82.1
EL10Ac2g03641 Beta vulgaris HOM05D005730 ORTHO05D007038 1.7e-21 105.5 56 78.6
FAN17G1913 Fragaria x ananassa HOM05D005730 ORTHO05D007038 1.7e-21 105.5 57 77.2
SHI37948 Sapria himalayana HOM05D005730 ORTHO05D007038 1.7e-21 105.5 67 67.2
Ca_25629_v3 Cicer arietinum L. HOM05D005730 ORTHO05D007038 2.3e-21 105.1 57 80.7
FAN17G0140 Fragaria x ananassa HOM05D005730 ORTHO05D007038 2.3e-21 105.1 56 78.6
Cpa.g.sc115.33 Carica papaya HOM05D005730 ORTHO05D007038 2.9e-21 104.8 59 74.6
BraA05t20340Z Brassica rapa HOM05D000059 ORTHO05D000528 6.6e-21 103.6 56 76.8
AUR62020709 Chenopodium quinoa HOM05D005730 ORTHO05D007038 6.6e-21 103.6 56 78.6
AUR62028015 Chenopodium quinoa HOM05D005730 ORTHO05D007038 6.6e-21 103.6 56 78.6
BcaC02g11258 Brassica carinata HOM05D005730 ORTHO05D007038 8.6e-21 103.2 56 76.8
C04p60960 Brassica napus HOM05D005730 ORTHO05D007038 8.6e-21 103.2 56 76.8
BraA04t17942Z Brassica rapa HOM05D000059 ORTHO05D000528 8.6e-21 103.2 56 76.8
A05p14120 Brassica napus HOM05D005730 ORTHO05D007038 1.5e-20 102.4 56 76.8
DCAR_019791 Daucus carota HOM05D005730 ORTHO05D007038 1.5e-20 102.4 56 76.8
Medtr6g093010 Medicago truncatula HOM05D005730 ORTHO05D007038 1.5e-20 102.4 56 78.6
Nitab4.5_0000413g0090 Nicotiana tabacum HOM05D005730 ORTHO05D007038 1.9e-20 102.1 56 78.6
Nitab4.5_0005014g0020 Nicotiana tabacum HOM05D001912 ORTHO05D001975 1.9e-20 102.1 56 78.6
Sabra06G0058600 Salix brachista HOM05D005730 ORTHO05D007038 1.9e-20 102.1 114 45.6
FAN11G1086 Fragaria x ananassa HOM05D005730 ORTHO05D007038 2.5e-20 101.7 56 76.8
TAR626G1073 Trochodendron aralioides HOM05D005730 ORTHO05D007038 5.5e-20 100.5 56 75.0
Peaxi162Scf00906g00224 Petunia axillaris HOM05D005730 ORTHO05D007038 1.2e-19 99.4 56 76.8
Solyc05g046390.3 Solanum lycopersicum HOM05D005730 ORTHO05D007038 1.6e-19 99.0 56 78.6
Hma1.2p1_0314F.1_g121950 Hydrangea macrophylla HOM05D005730 ORTHO05D007038 3.6e-19 97.8 52 76.9
PGSC0003DMG400013688 Solanum tuberosum HOM05D000482 ORTHO05D000349 8.0e-19 96.7 56 75.0
Pp3c25_300 Physcomitrium patens HOM05D005730 ORTHO05D007038 2.3e-18 95.1 71 62.0
SEGI_08291 Sequoiadendron giganteum HOM05D005730 ORTHO05D007038 4.0e-18 94.4 56 71.4
ATR0568G059 Amborella trichopoda HOM05D005730 ORTHO05D007038 1.5e-17 92.4 56 73.2
SalBow6G6230 Salvia bowleyana HOM05D005730 ORTHO05D007038 2.6e-17 91.7 52 76.9
Pp3c16_220 Physcomitrium patens HOM05D005730 ORTHO05D007038 3.4e-17 91.3 71 59.2
Migut.L00210 Erythranthe guttata HOM05D005730 ORTHO05D007038 4.4e-17 90.9 55 70.9
FAN28G2060 Fragaria x ananassa HOM05D002523 ORTHO05D002951 5.7e-17 90.5 49 75.5
Lj5A722T6 Lonicera japonica HOM05D005730 ORTHO05D007038 2.8e-16 88.2 46 82.6
MELO3C019212.2 Cucumis melo HOM05D005730 ORTHO05D007038 7.0e-15 83.6 56 69.6
Solyc09g059220.1 Solanum lycopersicum HOM05D005730 ORTHO05D007038 7.8e-14 80.1 69 49.3
Migut.K01179 Erythranthe guttata HOM05D005730 ORTHO05D007038 2.5e-12 75.1 49 65.3
CBR_g40455 Chara braunii HOM05D005730 ORTHO05D007038 7.3e-12 73.6 67 49.3
Mapoly0005s0214 Marchantia polymorpha HOM05D005730 ORTHO05D007038 3.6e-11 71.2 71 43.7
CDE02G1938 Ceratophyllum demersum HOM05D005730 ORTHO05D007038 4.7e-11 70.9 41 75.6
MCO07G159 Micromonas commoda HOM05D005730 ORTHO05D007038 5.2e-10 67.4 65 46.2
SHI03111 Sapria himalayana HOM05D005730 ORTHO05D007038 7.5e-09 63.5 45 64.4
Mapoly0005s0215 Marchantia polymorpha HOM05D005730 ORTHO05D007038 2.2e-08 62.0 56 48.2


User provided reference genes

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