Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 5.0e-117 424.5 219 100.0
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 3.6e-46 189.1 224 54.5
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 4.2e-39 165.6 197 54.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 9.8e-20 101.3 223 36.3
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 2.2e-19 100.1 247 34.8
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 2.0e-17 93.6 225 34.7
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 4.5e-17 92.4 226 36.3
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 4.5e-17 92.4 239 33.1
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 7.7e-17 91.7 234 33.8
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.3e-16 90.9 227 33.0
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 2.9e-16 89.7 236 34.3
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 3.8e-16 89.4 246 35.0
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 6.5e-16 88.6 234 35.5
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 1.1e-15 87.8 218 33.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 1.1e-15 87.8 242 33.5
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 1.9e-15 87.0 247 31.6
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 3.2e-15 86.3 210 32.4
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 5.5e-15 85.5 247 31.2
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 1.2e-14 84.3 241 31.5
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.2e-14 84.3 228 33.8
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.1e-14 83.6 222 36.5
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 2.8e-14 83.2 216 32.9
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 2.8e-14 83.2 206 34.0
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 4.7e-14 82.4 249 30.5
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.7e-14 82.4 216 33.3
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 4.7e-14 82.4 241 31.1
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 6.1e-14 82.0 216 32.9
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 6.1e-14 82.0 241 32.0
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.4e-13 80.9 236 33.1
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 1.8e-13 80.5 218 33.0
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.8e-13 80.5 215 31.6
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 2.3e-13 80.1 226 32.3
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 3.0e-13 79.7 216 32.4
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 4.0e-13 79.3 235 29.4
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 4.0e-13 79.3 229 32.3
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 6.8e-13 78.6 206 34.5
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 1.2e-12 77.8 238 34.9
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 1.2e-12 77.8 228 31.6
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 2.0e-12 77.0 242 31.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 2.6e-12 76.6 218 33.5
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 3.4e-12 76.3 229 31.4
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 3.4e-12 76.3 238 31.9
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 3.4e-12 76.3 221 35.7
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 7.5e-12 75.1 231 32.9
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 9.8e-12 74.7 216 32.9
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 1.3e-11 74.3 271 30.6
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 1.3e-11 74.3 230 30.9
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.3e-11 74.3 249 30.9
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.7e-11 73.9 198 34.3
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.2e-11 73.6 227 31.7
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 2.2e-11 73.6 247 30.0
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 6.3e-11 72.0 215 30.2
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 6.3e-11 72.0 202 32.7
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 8.3e-11 71.6 243 28.8
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 8.3e-11 71.6 213 32.4
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.1e-10 71.2 185 31.4
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.4e-10 70.9 228 32.0
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 1.4e-10 70.9 211 30.8
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 1.8e-10 70.5 184 33.2
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 4.1e-10 69.3 226 31.9
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 5.4e-10 68.9 204 34.8
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 9.2e-10 68.2 216 32.4
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 1.2e-09 67.8 209 31.6
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 4.5e-09 65.9 227 26.4
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 5.9e-09 65.5 239 25.1
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 7.8e-09 65.1 214 30.4
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.0e-08 64.7 275 27.6
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 2.3e-08 63.5 262 28.6
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 2.3e-08 63.5 230 30.0
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 2.9e-08 63.2 274 26.3
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 8.6e-08 61.6 229 27.1
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 1.1e-07 61.2 248 26.6
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 1.9e-07 60.5 221 31.2
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 7.3e-07 58.5 231 28.1
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 9.5e-07 58.2 213 28.6
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 2.8e-06 56.6 236 28.0
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 2.8e-06 56.6 255 27.8
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 6.1e-06 55.5 167 35.9


User provided reference genes

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