Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.2e-290 1002.3 466 100.0
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 1.3e-258 896.0 448 90.6
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 9.9e-256 886.3 457 89.7
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.2e-246 854.7 453 84.8
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 3.5e-245 851.3 444 85.4
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.0e-244 849.7 449 83.7
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 3.0e-244 848.2 483 79.9
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.9e-244 847.8 449 84.4
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 3.3e-243 844.7 453 83.7
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 4.3e-243 844.3 446 85.0
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 5.7e-243 844.0 449 84.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 3.7e-242 841.3 456 83.3
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 4.1e-241 837.8 456 82.9
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 4.1e-241 837.8 459 82.4
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 5.3e-241 837.4 462 82.3
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 5.3e-241 837.4 456 82.9
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 9.0e-241 836.6 459 83.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 9.0e-241 836.6 448 83.9
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.2e-240 836.3 455 83.5
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 3.4e-240 834.7 447 83.4
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.0e-239 833.2 451 82.5
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 3.8e-239 831.2 451 82.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.0e-239 830.9 451 82.5
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 6.5e-239 830.5 449 82.4
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.5e-238 828.6 453 81.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 7.2e-238 827.0 475 80.4
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.6e-237 825.9 446 83.4
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.6e-237 825.9 435 84.6
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.7e-237 825.1 466 78.8
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 6.1e-237 823.9 460 80.2
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 1.0e-236 823.2 431 85.4
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-236 822.4 464 80.4
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 3.9e-236 821.2 450 81.6
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.5e-235 819.3 444 83.3
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 7.4e-235 817.0 448 81.0
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.2e-234 815.5 437 83.8
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 6.3e-234 813.9 444 82.9
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.1e-233 813.1 459 79.7
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.1e-233 813.1 456 81.6
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.4e-233 812.8 463 79.7
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.8e-233 812.4 437 83.1
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.5e-232 809.3 436 83.5
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 2.0e-232 808.9 443 81.5
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.6e-232 808.5 490 76.3
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.0e-231 806.6 445 80.9
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.0e-231 806.6 434 82.5
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 8.5e-231 803.5 437 82.8
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.1e-230 803.1 433 81.3
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 1.1e-230 803.1 451 80.3
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 3.2e-230 801.6 436 83.3
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 9.4e-230 800.0 497 74.0
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 9.4e-230 800.0 497 74.0
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.6e-229 799.3 434 81.3
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 4.7e-229 797.7 432 82.2
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 3.9e-228 794.7 442 82.1
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 8.8e-228 793.5 443 81.7
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.1e-227 793.1 432 83.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.0e-227 792.3 448 79.5
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.6e-227 792.0 432 81.7
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.6e-227 792.0 451 78.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.3e-227 791.6 492 74.6
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 4.4e-227 791.2 431 82.1
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 5.7e-227 790.8 433 81.3
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 7.4e-227 790.4 444 79.5
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 7.4e-227 790.4 448 79.0
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 9.7e-227 790.0 447 79.9
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.3e-226 789.6 443 81.5
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.7e-226 789.3 431 81.9
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.7e-226 789.3 431 81.9
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.8e-226 788.5 449 78.8
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 4.8e-226 787.7 450 79.3
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.8e-226 787.7 444 79.1
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 6.3e-226 787.3 442 79.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 8.2e-226 786.9 447 79.6
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 1.4e-225 786.2 432 81.5
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.8e-225 785.8 447 79.4
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.8e-225 785.8 432 81.0
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.4e-225 785.4 433 81.3
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.4e-225 785.4 433 81.3
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.4e-225 785.4 486 75.9
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 5.3e-225 784.3 443 79.9
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.3e-223 779.6 450 78.2
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.7e-223 779.2 431 81.0
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.7e-223 779.2 433 79.0
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.2e-222 775.0 453 77.3
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.4e-217 758.8 455 75.4
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 3.1e-217 758.4 442 78.1
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 4.5e-216 754.6 485 73.4
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 3.7e-210 734.9 446 73.8
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 9.1e-209 730.3 445 74.6
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.1e-206 723.4 379 85.0
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 5.5e-206 721.1 454 73.6
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 3.4e-203 711.8 383 82.8
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 9.5e-198 693.7 397 76.6
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 4.0e-196 688.3 436 71.3
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 3.2e-193 678.7 451 67.6
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 2.0e-192 676.0 418 72.0
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 6.1e-189 664.5 449 69.5
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 5.2e-188 661.4 449 69.7
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.0e-185 651.0 421 72.9
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 1.2e-176 623.6 433 66.3
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 5.2e-172 608.2 338 80.2
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 8.3e-170 600.9 299 88.6
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 6.6e-167 591.3 309 85.1
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.0e-159 565.8 453 60.7
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.8e-156 556.6 457 58.6
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 4.0e-156 555.4 287 85.7
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 2.0e-155 553.1 377 69.5
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 3.4e-131 472.6 274 77.0
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.9e-83 312.4 196 74.5
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 8.6e-74 282.0 172 76.7
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 2.6e-70 270.4 430 41.2
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 7.5e-70 268.9 172 69.2
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.2e-68 261.9 132 87.1
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.6e-67 261.2 255 52.2
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.1e-63 248.4 133 82.0
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.1e-63 246.9 120 90.0
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 5.8e-62 242.7 222 58.1
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.4e-60 238.0 147 74.1
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 1.3e-58 231.5 138 76.1
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.4e-47 194.1 119 74.8
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.1e-47 193.7 124 66.9
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 4.4e-46 189.9 249 47.4
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 3.5e-35 153.7 98 71.4
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 3.0e-26 124.0 82 68.3
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.8e-24 116.7 103 55.3
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 4.8e-24 116.7 55 90.9
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 5.5e-20 103.2 61 75.4
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 5.5e-20 103.2 189 35.4
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.9e-19 99.4 105 47.6
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.8e-16 90.9 68 63.2
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 5.1e-10 70.1 56 60.7
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 1.3e-08 65.5 43 67.4


User provided reference genes

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