Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 1.3e-296 1022.3 519 100.0
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 8.3e-203 710.7 515 69.5
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 3.5e-201 705.3 519 68.8
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 3.3e-191 672.2 515 67.4
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 2.1e-182 642.9 522 61.5
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 1.2e-180 637.1 516 62.8
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 2.6e-180 636.0 513 64.1
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 6.4e-179 631.3 519 63.2
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 1.8e-173 613.2 524 59.7
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 2.6e-172 609.4 500 61.4
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 7.6e-172 607.8 488 61.5
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 9.9e-172 607.4 521 58.9
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 9.9e-172 607.4 486 62.8
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 1.9e-170 603.2 526 59.5
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 2.4e-170 602.8 522 58.2
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 5.5e-170 601.7 510 59.8
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 2.1e-169 599.7 520 57.7
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 6.0e-169 598.2 527 57.9
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 6.0e-169 598.2 489 59.9
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 5.1e-168 595.1 511 59.3
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 6.7e-168 594.7 488 59.6
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 1.9e-167 593.2 526 57.6
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 1.9e-167 593.2 511 58.9
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 3.3e-167 592.4 511 58.7
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 4.3e-167 592.0 520 56.5
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 4.3e-167 592.0 521 56.8
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 5.6e-167 591.7 519 56.5
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 7.4e-167 591.3 524 57.4
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 1.3e-166 590.5 488 61.5
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 2.8e-166 589.3 520 56.7
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 6.2e-166 588.2 519 56.5
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 1.1e-165 587.4 475 61.3
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 1.1e-165 587.4 505 58.6
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 2.4e-165 586.3 520 58.1
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 5.3e-165 585.1 520 57.9
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 6.9e-165 584.7 520 56.0
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 6.9e-165 584.7 499 58.1
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 9.0e-165 584.3 519 56.1
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 1.5e-164 583.6 518 56.4
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 1.5e-164 583.6 520 56.0
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 4.5e-164 582.0 515 56.5
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 5.8e-164 581.6 523 55.8
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 7.6e-164 581.3 508 57.5
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 1.3e-163 580.5 490 58.2
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 1.1e-162 577.4 504 56.3
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 1.9e-162 576.6 501 56.3
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 2.5e-162 576.2 511 57.5
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 3.2e-162 575.9 500 57.4
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 3.2e-162 575.9 523 56.2
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 4.2e-162 575.5 486 60.1
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 1.2e-161 573.9 520 57.1
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 2.1e-161 573.2 488 58.8
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 3.5e-161 572.4 508 57.3
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 6.0e-161 571.6 519 57.0
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 6.0e-161 571.6 489 58.3
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 5.1e-160 568.5 518 55.4
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 6.7e-160 568.2 497 57.7
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 4.3e-159 565.5 519 54.5
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.4e-159 564.7 552 53.6
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 9.6e-159 564.3 488 58.0
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 9.6e-159 564.3 513 56.9
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.7e-158 562.4 508 56.3
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 8.2e-158 561.2 521 55.5
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 8.2e-158 561.2 500 56.4
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 5.3e-157 558.5 479 58.2
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 9.0e-157 557.8 539 53.2
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 2.6e-156 556.2 513 55.8
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 3.4e-156 555.8 494 57.9
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 7.6e-156 554.7 495 56.0
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 2.2e-155 553.1 493 55.0
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 3.8e-155 552.4 489 58.1
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 7.2e-154 548.1 488 54.9
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.6e-153 547.0 497 55.9
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 3.5e-153 545.8 520 54.4
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 6.1e-153 545.0 490 55.3
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 2.3e-152 543.1 495 56.0
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 2.2e-150 536.6 525 53.3
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 2.0e-148 530.0 486 54.3
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 2.2e-147 526.6 615 46.7
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 8.5e-147 524.6 520 52.1
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 1.4e-146 523.9 541 52.5
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 4.2e-146 522.3 489 54.8
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.2e-145 520.8 489 54.6
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 4.6e-145 518.8 503 52.3
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 3.9e-144 515.8 529 52.2
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 2.5e-143 513.1 486 52.3
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 3.3e-143 512.7 428 60.3
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 4.8e-142 508.8 471 54.8
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 1.4e-141 507.3 506 52.0
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 4.1e-141 505.8 511 52.3
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 4.1e-141 505.8 499 52.3
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 5.0e-139 498.8 502 50.6
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 3.2e-138 496.1 497 54.9
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.1e-137 493.4 502 50.2
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 8.8e-136 488.0 400 61.0
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 5.7e-135 485.3 491 50.9
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 3.5e-132 476.1 503 50.9
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 7.7e-132 474.9 498 50.2
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 1.0e-131 474.6 452 54.0
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 3.2e-130 469.5 500 51.4
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 1.2e-129 467.6 509 48.5
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 2.3e-128 463.4 509 50.3
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 4.4e-127 459.1 535 46.5
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.1e-125 454.5 356 63.8
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 9.1e-125 451.4 489 49.9
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 5.9e-124 448.7 489 49.9
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 5.9e-124 448.7 491 49.3
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 8.5e-123 444.9 503 46.9
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 9.4e-122 441.4 498 45.8
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 1.4e-120 437.6 474 50.8
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 5.2e-120 435.6 489 49.7
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 2.0e-119 433.7 477 48.8
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 5.7e-119 432.2 440 52.7
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 1.7e-115 420.6 393 53.7
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 5.5e-114 415.6 396 52.8
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 5.4e-109 399.1 346 58.4
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 2.5e-106 390.2 296 66.2
CAN.G1581.3 Capsicum annuum HOM05D004385 ORTHO05D005245 3.3e-106 389.8 334 58.7
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 2.0e-103 380.6 462 45.5
Cfa020737 Carpinus fangiana HOM05D004385 ORTHO05D005245 6.4e-102 375.6 336 57.7
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 3.2e-101 373.2 640 36.6
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 6.6e-99 365.5 328 57.0
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 2.5e-98 363.6 402 48.5
Haze_18802 Corylus avellana HOM05D004385 ORTHO05D005245 9.5e-98 361.7 395 51.1
unitig_578.g16395 Utricularia gibba HOM05D004385 ORTHO05D005245 1.7e-94 350.9 334 56.0
Solyc07g016050.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 4.3e-90 336.3 344 50.3
FAN17G2530 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.5e-87 325.5 343 52.5
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 5.4e-85 319.3 437 42.8
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 3.5e-84 316.6 274 56.9
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 8.4e-78 295.4 231 59.3
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.4e-72 277.3 222 57.7
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 3.4e-71 273.5 448 40.0
Solyc07g016080.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.9e-67 260.0 279 48.4
Solyc07g016030.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.2e-62 244.2 348 42.0
EL10Ac6g13794 Beta vulgaris HOM05D004385 ORTHO05D005245 2.4e-61 240.7 270 51.5
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 5.4e-61 239.6 612 29.2
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 9.3e-53 212.2 462 31.2
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 9.3e-53 212.2 161 60.9
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 3.5e-52 210.3 145 68.3
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 2.3e-51 207.6 182 55.5
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 5.1e-51 206.5 179 55.3
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 5.1e-51 206.5 179 55.3
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 1.3e-49 201.8 186 52.7
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 7.6e-47 192.6 145 61.4
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 2.5e-42 177.6 161 55.3
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 2.1e-41 174.5 136 61.8
AUR62020718 Chenopodium quinoa HOM05D004385 ORTHO05D005245 6.9e-40 169.5 199 44.7
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 5.9e-39 166.4 155 54.8
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.0e-38 163.3 162 53.1
Sopen07g016630 Solanum pennellii HOM05D004385 ORTHO05D005245 4.2e-37 160.2 190 46.3
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.1e-35 153.3 118 62.7
AUR62020720 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.4e-31 140.6 171 42.1
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.9e-30 137.5 107 58.9
Solyc07g032590.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 6.5e-30 136.3 142 51.4
AUR62028003 Chenopodium quinoa HOM05D004385 ORTHO05D005245 8.5e-30 136.0 197 41.1
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 3.4e-23 114.0 186 34.4
PGSC0003DMG400007349 Solanum tuberosum HOM05D004385 ORTHO05D005245 8.5e-22 109.4 77 61.0
AUR62027998 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.2e-15 89.0 122 36.1
Medtr4g117010 Medicago truncatula HOM05D004385 ORTHO05D005245 8.0e-12 76.3 72 52.8
Medtr5g096240 Medicago truncatula HOM05D004385 ORTHO05D005245 1.0e-11 75.9 72 50.0
GSVIVG01026776001 Vitis vinifera HOM05D004385 ORTHO05D005245 4.0e-11 73.9 66 45.5


User provided reference genes

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