Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 8.2e-259 896.7 516 100.0
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.1e-206 722.6 520 75.8
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 4.1e-186 655.2 516 69.8
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 6.4e-163 578.2 533 60.6
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.1e-162 577.4 518 63.1
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.9e-162 576.6 517 63.4
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.9e-162 576.6 517 63.4
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 7.1e-162 574.7 514 67.1
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.6e-161 573.5 519 63.6
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 7.8e-161 571.2 515 60.2
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 7.8e-161 571.2 515 61.7
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 3.0e-160 569.3 519 61.5
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 3.9e-160 568.9 517 62.7
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 8.7e-160 567.8 518 63.3
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.5e-159 567.0 518 65.4
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 2.8e-158 562.8 520 61.9
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.4e-157 560.5 518 64.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.2e-156 557.4 515 61.0
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 1.5e-156 557.0 517 61.5
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 5.8e-156 555.1 520 60.2
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 2.9e-155 552.7 520 61.5
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 2.9e-155 552.7 519 61.5
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 2.9e-155 552.7 516 63.6
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 4.9e-155 552.0 519 64.0
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 4.9e-155 552.0 514 60.3
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 6.4e-155 551.6 522 62.3
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.1e-154 550.8 521 59.1
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 5.4e-154 548.5 521 60.5
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 7.1e-154 548.1 522 64.0
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 9.3e-154 547.7 522 64.4
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 9.3e-154 547.7 520 58.3
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 3.5e-153 545.8 520 58.7
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 1.3e-152 543.9 515 59.0
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.3e-152 543.1 518 57.9
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.9e-152 542.3 518 61.2
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 8.7e-152 541.2 514 58.0
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 8.7e-152 541.2 523 60.8
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 8.7e-152 541.2 525 58.3
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 3.3e-151 539.3 520 57.9
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 5.6e-151 538.5 522 63.2
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.8e-150 536.2 516 59.5
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 3.7e-150 535.8 513 57.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 3.7e-150 535.8 519 57.8
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 8.1e-150 534.6 516 61.2
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.4e-149 533.9 516 58.1
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.8e-149 533.5 516 61.8
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 2.4e-149 533.1 515 57.3
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.2e-148 530.8 514 57.8
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.5e-148 530.4 520 63.8
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 2.6e-148 529.6 514 57.0
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 5.8e-148 528.5 514 61.9
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 4.9e-147 525.4 520 54.4
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 8.7e-144 514.6 513 55.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.5e-143 513.8 500 57.0
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 2.5e-143 513.1 516 57.6
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 5.6e-143 511.9 519 59.2
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 1.1e-141 507.7 531 55.6
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 1.4e-141 507.3 520 54.6
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 2.4e-141 506.5 524 54.0
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.1e-141 506.1 518 59.5
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 3.1e-141 506.1 515 55.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.6e-140 503.1 528 58.1
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 1.0e-139 501.1 532 53.2
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.7e-139 500.4 517 57.6
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 6.5e-139 498.4 525 58.1
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.7e-137 493.0 529 51.8
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 2.7e-137 493.0 522 59.2
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.8e-136 490.3 529 52.6
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 3.0e-136 489.6 528 52.8
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 8.7e-136 488.0 529 57.3
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 5.7e-135 485.3 524 52.7
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 6.3e-134 481.9 548 52.4
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.8e-133 480.3 532 55.5
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 6.9e-133 478.4 526 56.1
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.5e-132 477.2 532 52.6
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 2.5e-130 469.9 519 52.4
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 4.2e-130 469.2 530 50.8
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.7e-129 466.5 527 50.9
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 4.6e-129 465.7 557 50.6
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 7.9e-129 464.9 514 54.9
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 2.3e-128 463.4 532 50.9
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.8e-126 456.4 523 50.5
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 6.9e-125 451.8 532 50.6
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.4e-124 449.5 529 49.9
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.7e-123 447.2 525 51.6
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.7e-123 447.2 531 49.9
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 1.4e-122 444.1 525 51.6
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 9.4e-122 441.4 367 71.9
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.3e-120 436.8 548 48.5
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.1e-117 427.9 519 50.5
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 2.0e-116 423.7 421 54.4
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.9e-115 419.9 527 51.0
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.2e-113 414.5 369 60.2
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 3.6e-113 412.9 361 65.1
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 1.9e-106 390.6 523 49.1
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.8e-102 376.7 334 65.3
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 5.7e-95 352.4 536 41.2
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.8e-93 347.4 525 41.1
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.4e-88 331.3 351 61.3
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.4e-87 326.6 520 41.7
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 2.2e-78 297.4 600 34.7
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.6e-60 238.0 362 47.8
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 4.4e-55 219.9 209 56.0
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.9e-50 204.5 558 31.7
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.6e-39 167.5 192 55.7
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 1.0e-30 139.0 163 49.1
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.4e-26 122.9 325 33.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 5.5e-21 106.7 127 44.9
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.1e-16 90.9 163 35.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.1e-16 90.9 325 31.1
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.0e-07 61.6 43 79.1
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 7.7e-07 59.7 53 54.7
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 2.9e-06 57.8 69 43.5
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 3.8e-06 57.4 82 41.5
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 3.8e-06 57.4 66 48.5


User provided reference genes

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