Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 0.0e+00 1134.8 599 100.0
Lsat_1_v5_gn_5_56841 Lactuca sativa HOM05D007342 ORTHO05D009252 1.5e-131 474.2 585 51.8
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 3.5e-72 276.9 635 37.0
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 5.7e-70 269.6 622 36.0
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 7.4e-70 269.2 593 38.1
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 3.6e-64 250.4 586 36.5
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 7.9e-64 249.2 640 35.8
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.8e-63 248.1 659 33.8
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 2.8e-61 240.7 669 33.9
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 8.2e-61 239.2 614 35.0
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 5.3e-60 236.5 608 34.9
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 1.2e-59 235.3 589 35.1
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 1.2e-59 235.3 589 35.1
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 3.4e-59 233.8 590 35.1
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 4.5e-59 233.4 682 33.1
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 4.5e-59 233.4 643 34.1
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 5.9e-59 233.0 622 34.6
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 1.0e-58 232.3 630 34.3
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 2.2e-58 231.1 543 35.9
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 8.5e-58 229.2 649 34.7
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 4.2e-57 226.9 622 33.4
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 7.2e-57 226.1 574 35.4
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 3.6e-56 223.8 624 32.5
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 6.1e-56 223.0 551 34.8
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 2.3e-55 221.1 612 34.0
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 6.7e-55 219.5 608 35.2
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 7.4e-54 216.1 554 34.5
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 9.7e-54 215.7 587 33.7
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 2.8e-53 214.2 666 33.2
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 8.2e-53 212.6 596 33.6
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 5.3e-52 209.9 600 33.3
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 1.2e-51 208.8 633 32.1
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 4.5e-51 206.8 581 35.1
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 2.2e-50 204.5 653 32.9
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 3.8e-50 203.8 638 32.1
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 2.5e-49 201.1 581 32.5
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 3.2e-49 200.7 659 28.2
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 7.2e-49 199.5 592 33.1
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 8.0e-48 196.1 596 32.0
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 8.0e-48 196.1 523 35.6
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 1.4e-47 195.3 614 32.4
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 1.4e-47 195.3 616 34.4
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 2.3e-47 194.5 570 33.5
DCAR_023285 Daucus carota HOM05D007342 ORTHO05D009252 4.0e-47 193.7 607 32.8
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 1.1e-46 192.2 617 33.2
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 1.1e-46 192.2 639 30.5
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 5.7e-46 189.9 613 32.8
CARHR290340 Cardamine hirsuta HOM05D007342 ORTHO05D009252 8.2e-45 186.0 570 30.5
Carub.0007s2583 Capsella rubella HOM05D007342 ORTHO05D009252 1.1e-44 185.7 590 30.7
Sp7g14200 Schrenkiella parvula HOM05D007342 ORTHO05D009252 1.6e-43 181.8 613 31.2
CiPaw.01G148300 Carya illinoinensis HOM05D007342 ORTHO05D009252 2.7e-43 181.0 428 35.3
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 1.0e-42 179.1 581 32.2
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 6.5e-42 176.4 616 29.4
AT4G15820 Arabidopsis thaliana HOM05D007342 ORTHO05D009252 6.5e-42 176.4 496 33.1
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 6.5e-42 176.4 619 31.7
Lalb_Chr12g0196601 Lupinus albus HOM05D007342 ORTHO05D009252 1.1e-41 175.6 622 31.5
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 2.5e-41 174.5 592 32.9
BcaC06g33445 Brassica carinata HOM05D007342 ORTHO05D009252 4.2e-41 173.7 605 32.2
C07p47420 Brassica napus HOM05D007342 ORTHO05D009252 4.2e-41 173.7 605 32.2
BolC7t45269H Brassica oleracea HOM05D007342 ORTHO05D009252 4.2e-41 173.7 605 32.2
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.2e-40 172.2 574 30.1
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 1.0e-39 169.1 610 31.8
Thhalv10025032m.g Eutrema salsugineum HOM05D007342 ORTHO05D009252 2.3e-39 167.9 613 30.3
BraA03t14036Z Brassica rapa HOM05D007342 ORTHO05D009252 3.4e-38 164.1 608 31.4
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 7.5e-38 162.9 611 31.3
Phvul.003G105800 Phaseolus vulgaris HOM05D007342 ORTHO05D009252 1.7e-37 161.8 641 29.8
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 2.8e-37 161.0 646 30.7
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 3.7e-37 160.6 547 33.5
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 6.3e-37 159.8 666 30.8
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 2.4e-36 157.9 619 28.8
Oeu045723.1 Olea europaea HOM05D007342 ORTHO05D009252 3.5e-35 154.1 180 48.9
A03p49350 Brassica napus HOM05D007342 ORTHO05D009252 5.9e-35 153.3 607 31.0
vmacro15234 Vaccinium macrocarpon HOM05D007342 ORTHO05D009252 5.9e-35 153.3 593 31.9
arahy.Tifrunner.gnm1.ann1.4CZB08 Arachis hypogaea HOM05D007342 ORTHO05D009252 1.0e-34 152.5 623 30.0
PSO832G2203 Papaver somniferum HOM05D007342 ORTHO05D009252 1.7e-34 151.8 503 30.6
TAR633G2120 Trochodendron aralioides HOM05D007342 ORTHO05D009252 2.2e-34 151.4 262 38.9
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 2.9e-34 151.0 559 29.7
Aa31LG10G6280 Aethionema arabicum HOM05D007342 ORTHO05D009252 1.5e-33 148.7 597 27.1
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 1.5e-33 148.7 549 29.3
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 1.5e-33 148.7 598 29.8
arahy.Tifrunner.gnm1.ann1.0PW7WM Arachis hypogaea HOM05D007342 ORTHO05D009252 3.2e-33 147.5 635 29.0
unitig_37.g12398 Utricularia gibba HOM05D007342 ORTHO05D009252 8.0e-32 142.9 585 28.9
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 2.6e-30 137.9 684 28.2
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 4.4e-30 137.1 671 28.0
Psat4g027440 Pisum sativum HOM05D007342 ORTHO05D009252 2.4e-28 131.3 602 27.4
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 5.9e-27 126.7 578 28.2
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 2.3e-26 124.8 130 50.8
CDE02G3410 Ceratophyllum demersum HOM05D007342 ORTHO05D009252 8.6e-26 122.9 418 30.4
BcaC06g32967 Brassica carinata HOM05D007342 ORTHO05D009252 7.3e-25 119.8 208 39.9
THA.LOC104820268 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.4e-23 115.5 130 50.0
DCAR_023500 Daucus carota HOM05D007342 ORTHO05D009252 3.0e-23 114.4 402 31.1
MBI18_g13693_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 1.2e-22 112.5 669 26.3
Lalb_Chr07g0177731 Lupinus albus HOM05D007342 ORTHO05D009252 3.7e-21 107.5 206 37.4
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 3.7e-21 107.5 132 43.2
MBI18_g13694_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 3.5e-19 100.9 755 25.8
THA.LOC104810667 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 8.6e-18 96.3 106 51.9
THA.LOC104820435 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.9e-17 95.1 104 51.0
HPP92_016942 Vanilla planifolia HOM05D007342 ORTHO05D009252 1.2e-16 92.4 137 42.3
Lj3P820T26 Lonicera japonica HOM05D007342 ORTHO05D009252 1.2e-14 85.9 368 29.1
Eucgr.L03117 Eucalyptus grandis HOM05D007342 ORTHO05D009252 9.8e-14 82.8 317 31.9
Sed0007886 Sechium edule HOM05D007342 ORTHO05D009252 8.3e-13 79.7 389 30.3
CsaV3_6G022280 Cucumis sativus L. HOM05D007342 ORTHO05D009252 1.4e-12 79.0 428 29.7
Ah.11g044170 Amaranthus hybridus HOM05D007342 ORTHO05D009252 5.4e-12 77.0 251 32.7
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 9.2e-12 76.3 308 26.6
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 1.2e-11 75.9 126 38.9
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 1.2e-11 75.9 159 32.1
Lj3P817T41 Lonicera japonica HOM05D007342 ORTHO05D009252 6.0e-11 73.6 286 31.5
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 5.0e-10 70.5 119 31.9
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 8.6e-10 69.7 156 31.4
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 1.1e-09 69.3 161 26.7
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 2.5e-09 68.2 156 30.1
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 3.3e-09 67.8 117 32.5
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 4.3e-09 67.4 118 33.1
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 5.6e-09 67.0 154 29.2
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 5.6e-09 67.0 156 30.8
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 7.3e-09 66.6 161 28.0
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 9.5e-09 66.2 154 29.2
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 9.5e-09 66.2 161 26.7
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 1.6e-08 65.5 118 30.5
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 1.6e-08 65.5 118 30.5
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 1.6e-08 65.5 162 26.5
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 1.6e-08 65.5 154 29.2
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 2.1e-08 65.1 118 31.4
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 2.8e-08 64.7 154 27.9
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 3.6e-08 64.3 154 26.0
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 3.6e-08 64.3 127 29.1
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 4.7e-08 63.9 156 27.6
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 4.7e-08 63.9 156 26.9
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 4.7e-08 63.9 154 25.3
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 4.7e-08 63.9 154 26.0
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 4.7e-08 63.9 154 27.9
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 4.7e-08 63.9 177 28.2
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 6.2e-08 63.5 156 28.2
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 8.1e-08 63.2 191 25.7
CBR_g23443 Chara braunii HOM05D005676 ORTHO05D007375 8.1e-08 63.2 189 30.2
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 8.1e-08 63.2 118 31.4
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 1.1e-07 62.8 156 26.3
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.1e-07 62.8 111 32.4
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 1.4e-07 62.4 159 27.0
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 1.4e-07 62.4 161 26.7
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 1.4e-07 62.4 118 28.8
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 1.8e-07 62.0 118 31.4
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.8e-07 62.0 156 27.6
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 1.8e-07 62.0 116 29.3
EL10Ac2g03667 Beta vulgaris HOM05D007342 ORTHO05D009252 2.3e-07 61.6 430 26.3
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 2.3e-07 61.6 154 26.0
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 2.3e-07 61.6 154 26.0
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 2.3e-07 61.6 118 30.5
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 3.1e-07 61.2 154 26.6
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 3.1e-07 61.2 155 29.0
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 4.0e-07 60.8 156 28.2
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 5.2e-07 60.5 154 25.3
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 5.2e-07 60.5 154 25.3
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 5.2e-07 60.5 154 25.3
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 5.2e-07 60.5 154 26.6
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 5.2e-07 60.5 156 26.3
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 5.2e-07 60.5 154 26.0
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 5.2e-07 60.5 156 26.3
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 6.8e-07 60.1 156 27.6
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 8.9e-07 59.7 151 30.5
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 8.9e-07 59.7 154 24.7
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 8.9e-07 59.7 124 27.4
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 1.2e-06 59.3 118 28.8
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.2e-06 59.3 156 26.9
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 1.2e-06 59.3 159 25.8
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 1.5e-06 58.9 118 30.5
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 2.0e-06 58.5 156 25.6
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 2.0e-06 58.5 191 25.7
BcaC06g32966 Brassica carinata HOM05D007342 ORTHO05D009252 3.4e-06 57.8 237 30.8
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 3.4e-06 57.8 159 25.8
MD07G1150100 Malus domestica HOM05D005676 ORTHO05D007375 4.4e-06 57.4 128 28.1
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 7.5e-06 56.6 407 22.4
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 9.8e-06 56.2 413 22.8


User provided reference genes

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