Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 6.1e-85 317.8 200 100.0
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 6.3e-74 281.2 200 88.0
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 3.4e-72 275.4 200 80.5
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 1.4e-70 270.0 199 75.9
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 2.5e-70 269.2 200 75.5
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 3.2e-70 268.9 200 77.5
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 9.4e-70 267.3 200 71.0
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.2e-69 266.9 199 70.9
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 2.1e-69 266.2 200 69.5
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 4.7e-69 265.0 200 70.0
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 1.0e-68 263.8 200 69.5
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.0e-68 263.8 200 70.0
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 2.3e-68 262.7 197 71.6
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 2.3e-68 262.7 197 71.6
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 3.0e-68 262.3 180 80.6
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 3.0e-68 262.3 200 69.5
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 3.9e-68 261.9 194 84.0
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 3.9e-68 261.9 198 70.2
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 6.7e-68 261.2 200 70.0
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 8.8e-68 260.8 200 67.5
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 8.8e-68 260.8 196 71.9
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 8.8e-68 260.8 200 68.0
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 8.8e-68 260.8 200 81.5
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 1.1e-67 260.4 200 70.0
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 2.0e-67 259.6 196 71.4
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 2.0e-67 259.6 200 69.5
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 2.6e-67 259.2 200 70.0
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 3.3e-67 258.8 191 85.3
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 4.4e-67 258.5 185 84.9
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 7.4e-67 257.7 200 71.5
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 7.4e-67 257.7 200 69.5
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 9.7e-67 257.3 200 71.0
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 9.7e-67 257.3 200 68.5
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 9.7e-67 257.3 200 69.5
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 9.7e-67 257.3 200 68.5
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.3e-66 256.9 200 70.5
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 1.3e-66 256.9 197 80.7
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 1.7e-66 256.5 200 80.0
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 1.7e-66 256.5 185 73.5
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 2.8e-66 255.8 200 68.5
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 2.8e-66 255.8 196 70.4
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 4.8e-66 255.0 200 67.5
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 8.2e-66 254.2 200 72.5
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 8.2e-66 254.2 200 72.0
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 8.2e-66 254.2 200 72.0
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 1.1e-65 253.8 177 75.1
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 1.1e-65 253.8 198 68.7
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 1.4e-65 253.4 200 67.5
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 3.1e-65 252.3 181 72.9
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 3.1e-65 252.3 181 72.9
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 3.1e-65 252.3 185 72.4
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 4.1e-65 251.9 200 68.5
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 5.3e-65 251.5 180 86.7
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 1.2e-64 250.4 200 80.5
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 1.2e-64 250.4 200 80.5
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 1.6e-64 250.0 198 67.7
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 1.6e-64 250.0 197 68.5
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 1.6e-64 250.0 191 71.2
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 2.0e-64 249.6 200 69.5
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 2.0e-64 249.6 181 71.8
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.6e-64 249.2 181 72.9
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.6e-64 249.2 181 72.9
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.6e-64 249.2 181 72.9
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.6e-64 249.2 181 72.9
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 2.6e-64 249.2 181 80.7
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 3.5e-64 248.8 180 86.1
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 4.5e-64 248.4 181 71.8
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 7.7e-64 247.7 181 71.3
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 1.0e-63 247.3 181 71.3
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 1.3e-63 246.9 178 72.5
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 3.8e-63 245.4 195 68.2
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 8.5e-63 244.2 198 68.7
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 1.1e-62 243.8 198 68.7
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 2.5e-62 242.7 198 67.7
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 5.5e-62 241.5 198 67.2
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 5.5e-62 241.5 198 67.2
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 5.5e-62 241.5 198 67.2
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 5.5e-62 241.5 198 67.2
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 7.2e-62 241.1 197 67.0
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 7.2e-62 241.1 225 60.0
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 1.2e-61 240.4 198 66.7
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 1.6e-61 240.0 244 57.4
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 2.1e-61 239.6 200 65.0
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 1.0e-60 237.3 181 68.0
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 1.0e-60 237.3 200 63.5
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 2.3e-60 236.1 200 61.5
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 4.0e-60 235.3 198 66.7
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 2.6e-59 232.6 198 65.2
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 7.5e-59 231.1 178 68.0
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 3.1e-57 225.7 171 77.8
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 2.7e-56 222.6 199 70.4
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 3.5e-56 222.2 200 63.0
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 3.5e-56 222.2 200 63.0
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 3.5e-56 222.2 200 63.0
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 1.3e-55 220.3 169 70.4
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 1.9e-54 216.5 200 60.5
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.9e-54 216.5 199 61.8
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 2.5e-54 216.1 185 63.8
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 3.0e-52 209.1 153 72.5
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 6.8e-52 208.0 181 61.9
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 3.7e-50 202.2 199 56.3
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 3.7e-50 202.2 151 71.5
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 6.3e-50 201.4 151 70.2
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 1.4e-49 200.3 158 67.1
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 7.2e-46 188.0 183 55.2
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 2.3e-36 156.4 141 61.0
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 1.6e-29 133.7 157 51.6
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 1.6e-29 133.7 157 51.6
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 8.3e-26 121.3 71 83.1
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 1.1e-25 120.9 71 83.1
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 5.4e-25 118.6 185 38.4
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 1.3e-23 114.0 153 47.1
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 8.6e-23 111.3 77 68.8
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 3.1e-20 102.8 58 86.2


User provided reference genes

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