Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 8.7e-102 373.6 186 100.0
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 5.0e-49 198.4 169 59.8
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 5.0e-49 198.4 169 59.8
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 2.8e-36 156.0 181 47.5
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 7.0e-27 124.8 126 46.0
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 1.2e-26 124.0 129 44.2
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 1.6e-26 123.6 130 42.3
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 1.6e-26 123.6 131 44.3
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 2.0e-26 123.2 121 47.1
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 2.0e-26 123.2 131 43.5
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.0e-26 123.2 131 43.5
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.0e-26 123.2 131 43.5
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.0e-26 123.2 131 43.5
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.7e-26 122.9 131 43.5
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.7e-26 122.9 131 43.5
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 2.7e-26 122.9 126 43.7
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 2.7e-26 122.9 136 43.4
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 4.5e-26 122.1 120 46.7
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 5.9e-26 121.7 131 42.7
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 5.9e-26 121.7 131 42.7
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 5.9e-26 121.7 131 43.5
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.0e-25 120.9 126 44.4
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 1.0e-25 120.9 136 42.6
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 1.0e-25 120.9 131 45.0
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.0e-25 120.9 126 44.4
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 1.0e-25 120.9 127 44.1
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 1.3e-25 120.6 121 47.1
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 1.3e-25 120.6 126 44.4
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 1.3e-25 120.6 136 42.6
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 1.3e-25 120.6 120 45.8
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 1.3e-25 120.6 132 42.4
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 1.7e-25 120.2 136 42.6
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 1.7e-25 120.2 126 44.4
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 1.7e-25 120.2 121 45.5
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.7e-25 120.2 131 45.0
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 1.7e-25 120.2 132 42.4
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 2.3e-25 119.8 139 43.9
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 2.3e-25 119.8 126 43.7
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 2.3e-25 119.8 143 38.5
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 2.3e-25 119.8 136 42.6
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 2.9e-25 119.4 131 45.0
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 3.8e-25 119.0 131 44.3
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 3.8e-25 119.0 127 41.7
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 3.8e-25 119.0 129 45.0
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 3.8e-25 119.0 143 37.8
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 3.8e-25 119.0 121 46.3
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 5.0e-25 118.6 143 37.8
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 5.0e-25 118.6 127 44.1
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 6.6e-25 118.2 126 43.7
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 6.6e-25 118.2 118 44.9
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 6.6e-25 118.2 138 42.8
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 6.6e-25 118.2 126 43.7
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 8.6e-25 117.9 132 42.4
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 8.6e-25 117.9 115 46.1
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 8.6e-25 117.9 120 45.8
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 8.6e-25 117.9 129 41.1
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 8.6e-25 117.9 135 41.5
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.1e-24 117.5 126 43.7
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 1.1e-24 117.5 132 42.4
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 1.1e-24 117.5 126 43.7
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 1.1e-24 117.5 139 42.4
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 1.1e-24 117.5 127 43.3
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 1.1e-24 117.5 128 44.5
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.1e-24 117.5 124 42.7
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 1.5e-24 117.1 124 44.4
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 1.5e-24 117.1 120 47.5
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 1.5e-24 117.1 120 45.0
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 1.5e-24 117.1 120 45.0
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.9e-24 116.7 118 45.8
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 1.9e-24 116.7 131 42.0
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 2.5e-24 116.3 118 44.1
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 2.5e-24 116.3 132 41.7
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 2.5e-24 116.3 118 44.1
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 2.5e-24 116.3 132 41.7
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 2.5e-24 116.3 132 41.7
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 2.5e-24 116.3 124 43.5
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 2.5e-24 116.3 121 44.6
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 2.5e-24 116.3 120 45.0
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 3.3e-24 115.9 118 44.1
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 3.3e-24 115.9 132 40.9
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 3.3e-24 115.9 131 42.7
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 3.3e-24 115.9 120 45.8
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 3.3e-24 115.9 118 44.1
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 4.2e-24 115.5 122 43.4
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 4.2e-24 115.5 118 43.2
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 4.2e-24 115.5 139 41.0
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 4.2e-24 115.5 122 44.3
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 4.2e-24 115.5 133 44.4
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 4.2e-24 115.5 129 41.9
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 4.2e-24 115.5 120 44.2
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 4.2e-24 115.5 120 45.0
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 5.5e-24 115.2 118 43.2
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 5.5e-24 115.2 139 40.3
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.5e-24 115.2 131 43.5
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.5e-24 115.2 131 43.5
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 5.5e-24 115.2 131 43.5
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 7.2e-24 114.8 139 40.3
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 7.2e-24 114.8 139 40.3
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 7.2e-24 114.8 139 40.3
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 7.2e-24 114.8 140 40.0
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 7.2e-24 114.8 129 43.4
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 7.2e-24 114.8 129 43.4
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 7.2e-24 114.8 120 43.3
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 9.5e-24 114.4 129 42.6
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 9.5e-24 114.4 139 40.3
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 1.2e-23 114.0 118 43.2
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 1.2e-23 114.0 120 42.5
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 2.1e-23 113.2 118 44.1
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 4.7e-23 112.1 131 42.0
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 4.7e-23 112.1 122 43.4
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 6.1e-23 111.7 142 38.7
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 8.0e-23 111.3 121 46.3
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 8.0e-23 111.3 142 38.7
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.0e-22 110.9 141 38.3
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.0e-22 110.9 139 40.3
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 1.8e-22 110.2 122 41.0
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 1.8e-22 110.2 122 41.0
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 1.8e-22 110.2 119 43.7
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 2.3e-22 109.8 136 40.4
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 2.3e-22 109.8 144 37.5
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 2.3e-22 109.8 144 37.5
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 2.3e-22 109.8 120 41.7
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 2.3e-22 109.8 118 41.5
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 2.3e-22 109.8 136 39.7
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 3.0e-22 109.4 124 41.1
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 3.0e-22 109.4 142 38.7
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 3.0e-22 109.4 120 40.8
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 4.0e-22 109.0 124 40.3
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 4.0e-22 109.0 118 41.5
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 8.9e-22 107.8 120 42.5
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 8.9e-22 107.8 127 40.2
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 1.2e-21 107.5 120 43.3
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 1.2e-21 107.5 120 43.3
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 1.5e-21 107.1 120 42.5
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 1.5e-21 107.1 120 41.7
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 2.6e-21 106.3 120 41.7
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 4.4e-21 105.5 170 34.7
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 7.5e-21 104.8 136 39.0
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 3.7e-20 102.4 136 38.2
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 6.3e-20 101.7 132 39.4
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 6.3e-20 101.7 132 39.4
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 5.4e-19 98.6 136 36.0
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 1.2e-18 97.4 154 33.8
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 7.8e-18 94.7 129 38.0
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 7.8e-18 94.7 121 42.1
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 2.3e-17 93.2 110 39.1
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.1e-16 90.9 182 29.7
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 1.5e-16 90.5 104 39.4
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 2.8e-15 86.3 111 38.7
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.8e-14 83.6 80 45.0
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.8e-14 83.6 133 35.3
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 1.2e-13 80.9 139 35.3
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 1.2e-13 80.9 73 46.6
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 1.2e-13 80.9 102 39.2
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 1.5e-13 80.5 92 38.0
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 2.6e-13 79.7 101 39.6
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 9.8e-13 77.8 73 46.6
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 1.7e-12 77.0 107 35.5
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 2.2e-12 76.6 79 43.0
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 1.4e-11 73.9 56 55.4
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 5.4e-11 72.0 72 41.7
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 9.2e-11 71.2 55 58.2
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 1.6e-10 70.5 73 38.4
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 5.0e-09 65.5 102 34.3
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 1.5e-08 63.9 95 36.8
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 1.5e-08 63.9 95 36.8
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.8e-06 57.0 55 45.5
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 2.3e-06 56.6 56 41.1
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 4.0e-06 55.8 82 25.6


User provided reference genes

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