Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.0e-112 409.1 204 100.0
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 7.5e-91 337.4 204 82.8
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.3e-78 295.4 215 67.4
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 1.6e-77 293.1 202 66.8
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.6e-77 293.1 212 65.6
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.1e-77 292.7 200 68.5
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.4e-76 290.0 205 67.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 4.0e-76 288.5 202 68.3
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 7.6e-75 284.3 202 66.3
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.3e-74 283.5 204 64.2
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.7e-74 283.1 201 67.7
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.9e-73 279.6 202 65.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.4e-73 279.3 207 68.6
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 3.2e-73 278.9 202 65.8
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.2e-73 278.9 202 65.8
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.2e-72 276.9 204 65.2
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.2e-72 276.9 206 65.5
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.6e-72 276.6 204 65.7
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.1e-72 276.2 191 66.5
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 7.8e-72 274.2 202 68.3
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.7e-71 273.1 204 61.3
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.3e-71 272.7 209 65.1
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.9e-71 271.9 217 63.6
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 2.5e-70 269.2 202 62.4
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 5.6e-70 268.1 204 63.2
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.6e-70 267.3 202 62.4
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 9.6e-70 267.3 202 62.4
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 1.3e-69 266.9 202 65.3
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.6e-69 266.5 202 65.3
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.6e-69 266.5 202 63.4
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.6e-69 266.5 200 62.5
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.1e-69 266.2 195 68.7
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 2.8e-69 265.8 202 64.9
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 3.6e-69 265.4 207 63.3
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 6.2e-69 264.6 201 64.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 1.4e-68 263.5 207 59.9
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.8e-68 263.1 202 64.9
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 2.4e-68 262.7 202 62.9
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.1e-68 262.3 179 68.7
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 6.9e-68 261.2 206 61.7
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.0e-67 259.6 242 52.9
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.0e-67 259.6 209 60.3
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.8e-67 258.1 202 60.9
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 5.8e-67 258.1 206 60.2
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 5.8e-67 258.1 206 60.7
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 9.9e-67 257.3 203 64.5
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.7e-66 256.5 215 57.7
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 2.9e-66 255.8 205 60.0
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 3.8e-66 255.4 206 60.2
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 3.8e-66 255.4 203 64.5
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 3.8e-66 255.4 206 62.6
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.4e-66 254.6 200 61.5
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 8.4e-66 254.2 199 63.8
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.9e-65 253.1 205 58.5
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.4e-65 252.7 204 62.7
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 2.4e-65 252.7 205 60.5
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 4.2e-65 251.9 206 59.7
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 5.4e-65 251.5 202 61.9
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 5.4e-65 251.5 202 61.4
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 7.1e-65 251.1 206 59.7
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 7.1e-65 251.1 206 59.7
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.6e-64 250.0 186 62.9
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.6e-64 250.0 222 55.9
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.6e-64 250.0 206 59.7
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 2.1e-64 249.6 203 63.5
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 2.1e-64 249.6 202 59.9
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.1e-64 249.6 203 63.1
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 3.5e-64 248.8 197 60.4
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.0e-63 247.3 202 60.9
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 3.0e-63 245.7 163 74.8
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 3.9e-63 245.4 207 58.5
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 5.1e-63 245.0 206 59.7
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.1e-62 243.8 203 61.6
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 1.9e-62 243.0 202 58.9
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 3.3e-62 242.3 203 60.1
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 7.4e-62 241.1 205 62.0
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.3e-61 240.4 194 55.7
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.6e-61 240.0 202 57.4
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.1e-60 237.3 202 56.9
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 3.4e-59 232.3 197 57.9
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 5.8e-59 231.5 203 59.1
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 9.9e-59 230.7 193 58.5
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 3.8e-58 228.8 232 51.7
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 3.5e-56 222.2 186 57.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 3.7e-53 212.2 138 66.7
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.8e-52 209.9 204 52.5
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 8.4e-50 201.1 164 56.1
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.6e-48 196.8 169 54.4
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-48 196.1 216 52.8
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.7e-48 196.1 141 62.4
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 2.4e-44 183.0 164 56.1
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.4e-41 173.7 202 49.0
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.9e-38 163.3 108 77.8
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 4.3e-38 162.2 154 55.2
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.6e-37 160.2 119 62.2
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.8e-37 159.5 171 49.7
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.1e-33 147.5 151 49.7
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.0e-31 141.0 138 50.7
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 2.4e-28 129.8 119 51.3
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 3.8e-26 122.5 90 71.1
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 4.2e-25 119.0 162 36.4
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 7.4e-22 108.2 169 40.8
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.2e-21 106.7 166 36.7
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.7e-21 105.9 83 62.7
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 6.3e-21 105.1 62 69.4
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 7.0e-20 101.7 107 51.4
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.3e-18 97.4 56 78.6
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 6.5e-18 95.1 90 54.4
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.1e-12 77.8 49 67.3
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 8.5e-10 68.2 54 63.0
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 2.5e-09 66.6 39 71.8
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.2e-08 64.3 38 73.7
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 6.1e-08 62.0 45 64.4
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 2.3e-07 60.1 97 38.1
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 4.0e-07 59.3 86 45.3


User provided reference genes

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