Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3793 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.3e-267 924.5 460 100.0
ECA240G2590 Erigeron canadensis HOM05D003482 ORTHO05D004194 6.9e-201 704.1 424 80.7
ECA240G0557 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.7e-167 593.2 420 71.0
ECA240G2186 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.6e-165 586.6 393 73.5
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 1.3e-159 567.0 460 62.2
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 9.5e-158 560.8 466 62.4
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.4e-156 557.0 464 61.9
ECA240G4147 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.3e-154 550.4 430 66.7
Lsat_1_v5_gn_5_58881 Lactuca sativa HOM05D003482 ORTHO05D004194 3.1e-153 545.8 442 61.8
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 2.0e-152 543.1 455 61.1
ECA240G0756 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.5e-152 542.3 430 66.0
Lsat_1_v5_gn_5_58921 Lactuca sativa HOM05D003482 ORTHO05D004194 1.1e-150 537.3 432 62.7
Lsat_1_v5_gn_5_59000 Lactuca sativa HOM05D003482 ORTHO05D004194 1.6e-149 533.5 436 61.9
Lsat_1_v5_gn_5_58361 Lactuca sativa HOM05D003482 ORTHO05D004194 4.0e-148 528.9 443 61.2
HanXRQChr13g0411981 Helianthus annuus HOM05D003482 ORTHO05D004194 7.3e-142 508.1 440 60.9
HanXRQChr13g0412011 Helianthus annuus HOM05D003482 ORTHO05D004194 1.5e-139 500.4 421 60.6
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 3.0e-135 486.1 432 56.9
Lsat_1_v5_gn_5_60400 Lactuca sativa HOM05D003482 ORTHO05D004194 3.9e-135 485.7 397 61.0
TWI34G0517 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 8.9e-132 474.6 441 54.4
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 3.7e-130 469.2 492 50.8
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 4.9e-130 468.8 476 52.5
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 3.2e-129 466.1 497 50.3
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 5.4e-129 465.3 490 50.8
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 1.6e-128 463.8 497 48.9
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 2.1e-128 463.4 464 50.4
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 4.6e-128 462.2 501 48.9
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.0e-127 461.1 499 49.3
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 1.3e-127 460.7 487 49.9
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 2.3e-127 459.9 473 51.0
Lsat_1_v5_gn_5_60580 Lactuca sativa HOM05D003482 ORTHO05D004194 3.0e-127 459.5 551 48.1
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 5.1e-127 458.8 496 49.8
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 6.6e-127 458.4 491 49.5
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 5.6e-126 455.3 493 48.7
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 7.3e-126 454.9 487 48.5
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 1.2e-125 454.1 485 50.1
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 1.6e-125 453.8 493 48.9
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 3.6e-125 452.6 476 49.8
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 4.7e-125 452.2 490 48.6
Lsat_1_v5_gn_5_60480 Lactuca sativa HOM05D003482 ORTHO05D004194 4.7e-125 452.2 429 55.5
Sabra18G0008800 Salix brachista HOM05D003482 ORTHO05D004194 4.7e-125 452.2 497 48.7
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 6.2e-125 451.8 476 49.4
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 6.2e-125 451.8 475 49.5
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 6.2e-125 451.8 475 49.7
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 8.1e-125 451.4 475 49.5
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 1.1e-124 451.1 485 48.5
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.1e-124 451.1 495 48.1
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 1.4e-124 450.7 483 49.9
Haze_21807 Corylus avellana HOM05D003482 ORTHO05D004194 1.4e-124 450.7 512 47.5
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 3.1e-124 449.5 483 50.3
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 4.0e-124 449.1 476 49.4
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 4.0e-124 449.1 484 49.2
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 6.8e-124 448.4 485 48.0
Lsat_1_v5_gn_5_60420 Lactuca sativa HOM05D003482 ORTHO05D004194 6.8e-124 448.4 440 54.5
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 8.9e-124 448.0 475 49.1
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 8.9e-124 448.0 482 48.3
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 1.2e-123 447.6 490 48.4
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 1.2e-123 447.6 455 51.0
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 2.0e-123 446.8 441 51.5
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 3.4e-123 446.0 485 48.2
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 3.4e-123 446.0 488 49.2
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 7.6e-123 444.9 492 48.6
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 9.9e-123 444.5 476 50.6
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 9.9e-123 444.5 473 50.3
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 1.7e-122 443.7 526 46.8
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 1.7e-122 443.7 526 46.6
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 2.9e-122 443.0 483 48.4
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 3.8e-122 442.6 473 50.1
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 3.8e-122 442.6 471 48.8
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 4.9e-122 442.2 496 48.0
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 6.4e-122 441.8 478 48.5
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 6.4e-122 441.8 472 48.1
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 8.4e-122 441.4 537 45.8
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 8.4e-122 441.4 469 49.7
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 1.4e-121 440.7 477 49.5
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 1.9e-121 440.3 495 47.1
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 2.4e-121 439.9 471 48.6
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 3.2e-121 439.5 488 47.5
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 7.1e-121 438.3 494 48.0
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 9.2e-121 438.0 482 48.1
Nitab4.5_0000970g0010 Nicotiana tabacum HOM05D003482 ORTHO05D004194 1.2e-120 437.6 474 48.1
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 1.2e-120 437.6 483 49.3
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 1.2e-120 437.6 477 48.6
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 1.6e-120 437.2 490 45.9
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 1.6e-120 437.2 472 49.6
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 2.1e-120 436.8 481 48.9
Hund03269 Selenicereus undatus HOM05D003482 ORTHO05D004194 2.7e-120 436.4 489 48.3
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 3.5e-120 436.0 481 49.3
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 3.5e-120 436.0 487 48.5
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 6.0e-120 435.3 476 47.1
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 6.0e-120 435.3 488 47.5
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 1.3e-119 434.1 484 48.1
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 8.6e-119 431.4 404 54.5
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 8.6e-119 431.4 536 44.8
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 1.9e-118 430.3 483 48.7
VMungo0647G1298 Vigna mungo HOM05D003482 ORTHO05D004194 2.5e-118 429.9 482 47.7
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 3.3e-118 429.5 481 47.4
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 9.6e-118 427.9 473 47.8
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 9.6e-118 427.9 475 46.9
FvH4_2g36372 Fragaria vesca HOM05D003482 ORTHO05D004194 9.6e-118 427.9 428 50.9
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 4.7e-117 425.6 464 48.1
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.1e-116 424.5 459 47.7
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 1.4e-116 424.1 428 50.5
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 2.4e-116 423.3 493 47.3
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 3.1e-116 422.9 459 47.7
HanXRQChr03g0082871 Helianthus annuus HOM05D003482 ORTHO05D004194 5.2e-116 422.2 322 65.8
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 1.2e-115 421.0 459 49.7
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 4.4e-115 419.1 490 47.1
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 5.8e-115 418.7 494 45.1
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 5.8e-115 418.7 492 45.3
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 1.9e-113 413.7 481 47.2
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 1.2e-112 411.0 474 47.3
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 1.3e-111 407.5 479 46.1
Sed0005804 Sechium edule HOM05D003482 ORTHO05D004194 1.3e-111 407.5 495 45.9
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 2.5e-110 403.3 488 46.3
HanXRQChr13g0411841 Helianthus annuus HOM05D003482 ORTHO05D004194 9.6e-110 401.4 330 63.0
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 9.6e-110 401.4 481 45.5
HanXRQChr13g0407961 Helianthus annuus HOM05D003482 ORTHO05D004194 3.6e-109 399.4 327 62.1
PGSC0003DMG400029592 Solanum tuberosum HOM05D003482 ORTHO05D004194 3.4e-107 392.9 441 46.3
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 1.3e-106 391.0 484 43.8
HanXRQChr13g0412001 Helianthus annuus HOM05D003482 ORTHO05D004194 1.7e-106 390.6 321 63.2
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.2e-106 390.2 477 44.9
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.2e-106 390.2 477 44.7
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 1.1e-105 387.9 485 44.1
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 8.7e-103 378.3 450 44.0
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 5.3e-100 369.0 566 39.9
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 5.3e-100 369.0 485 42.3
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 1.7e-98 364.0 468 44.4
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 2.1e-96 357.1 463 44.5
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 2.3e-95 353.6 445 44.3
AagrBONN_evm.TU.Sc2ySwM_228.3217 Anthoceros agrestis HOM05D003482 ORTHO05D004194 2.4e-92 343.6 427 41.2
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 4.0e-92 342.8 436 44.0
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 6.9e-92 342.0 316 55.7
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 1.2e-91 341.3 318 54.7
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 1.0e-90 338.2 451 41.7
MD15G1102100 Malus domestica HOM05D003482 ORTHO05D004194 1.2e-88 331.3 413 46.2
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 3.0e-87 326.6 476 39.7
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 3.3e-86 323.2 460 41.5
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 6.9e-76 288.9 221 62.0
TPR.G12040 Trifolium pratense HOM05D003482 ORTHO05D004194 6.7e-71 272.3 381 41.7
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 2.8e-69 266.9 210 59.0
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 2.8e-69 266.9 206 61.7
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 4.1e-68 263.1 212 58.5
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 2.0e-67 260.8 224 56.7
ECA240G1043 Erigeron canadensis HOM05D003482 ORTHO05D004194 2.2e-66 257.3 213 63.8
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 8.5e-58 228.8 223 48.4
SEGI_21174 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 3.6e-56 223.4 312 42.6
Potri.018G004500 Populus trichocarpa HOM05D003482 ORTHO05D004194 4.4e-54 216.5 180 61.1
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.1e-52 211.8 179 57.0
vmacro05099 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 1.2e-51 208.4 291 44.3
Sabra18G0012500 Salix brachista HOM05D000009 ORTHO05D000008 6.5e-42 176.0 177 52.0
Cc00_g11230 Coffea canephora HOM05D003482 ORTHO05D004194 1.9e-41 174.5 271 36.9
Oeu059293.1 Olea europaea HOM05D003482 ORTHO05D004194 3.3e-41 173.7 239 39.7
SEGI_21512 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 4.5e-35 153.3 142 52.8
Sabra18G0005800 Salix brachista HOM05D003482 ORTHO05D004194 2.3e-34 151.0 143 55.9
Sabra18G0007800 Salix brachista HOM05D003482 ORTHO05D004194 2.3e-34 151.0 143 55.9
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 5.0e-34 149.8 132 56.1
ECA240G1890 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.4e-31 141.7 91 78.0
HanXRQChr13g0411991 Helianthus annuus HOM05D003482 ORTHO05D004194 2.3e-31 141.0 87 80.5
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 1.2e-30 138.7 88 73.9
Nitab4.5_0000502g0210 Nicotiana tabacum HOM05D003482 ORTHO05D019565 5.6e-25 119.8 104 50.0
Lalb_Chr22g0361021 Lupinus albus HOM05D003482 ORTHO05D004194 1.6e-24 118.2 108 50.0
ECA236G4231 Erigeron canadensis HOM05D001186 ORTHO05D000971 9.2e-20 102.4 51 88.2
ECA233G1288 Erigeron canadensis HOM05D001186 ORTHO05D000971 6.0e-19 99.8 50 92.0
Lsat_1_v5_gn_5_60340 Lactuca sativa HOM05D003482 ORTHO05D004194 3.9e-18 97.1 63 63.5
Lsat_1_v5_gn_7_104720 Lactuca sativa HOM05D003482 ORTHO05D004194 1.5e-17 95.1 107 44.9
Lsat_1_v5_gn_5_60320 Lactuca sativa HOM05D003482 ORTHO05D004194 1.9e-17 94.7 77 58.4
ECA234G2055 Erigeron canadensis HOM05D000278 ORTHO05D005056 1.2e-14 85.5 39 94.9
PSO832G2792 Papaver somniferum HOM05D003482 ORTHO05D004194 2.6e-14 84.3 123 40.7
ECA233G0454 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-14 83.6 40 92.5
ECA246G4493 Erigeron canadensis HOM05D000048 ORTHO05D000207 9.9e-14 82.4 38 94.7
ECA194G0008 Erigeron canadensis HOM05D001186 ORTHO05D000971 2.2e-13 81.3 38 92.1
ECA248G3654 Erigeron canadensis HOM05D000041 ORTHO05D000452 8.3e-13 79.3 39 89.7
ECA246G2987 Erigeron canadensis HOM05D001186 ORTHO05D000971 4.1e-12 77.0 42 85.7
ECA247G3141 Erigeron canadensis HOM05D001186 ORTHO05D000971 9.2e-12 75.9 38 89.5
CDE05G2143 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 4.6e-11 73.6 98 42.9
ECA238G4256 Erigeron canadensis HOM05D001186 ORTHO05D000971 7.8e-11 72.8 36 86.1
Sabra18G0012600 Salix brachista HOM05D003482 ORTHO05D010018 3.0e-10 70.9 97 39.2
ECA236G1675 Erigeron canadensis HOM05D000328 ORTHO05D000191 5.1e-10 70.1 40 75.0
Potri.012G082950 Populus trichocarpa HOM05D003482 ORTHO05D004194 4.0e-07 60.5 46 65.2
Ah.09g235230 Amaranthus hybridus HOM05D002688 ORTHO05D002911 6.8e-07 59.7 33 84.8
ECA199G0005 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.4e-06 57.0 24 100.0


User provided reference genes

Program Settings