Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.5e-256 889.4 581 100.0
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.1e-184 650.6 436 77.5
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 2.2e-183 646.4 417 78.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.6e-154 549.3 377 70.3
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.5e-152 543.9 421 64.1
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.6e-152 543.1 376 71.0
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.4e-152 542.7 420 65.0
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.4e-152 542.7 420 64.8
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.4e-152 542.7 376 71.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 9.8e-152 541.2 364 72.0
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.8e-151 539.7 420 64.5
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 3.1e-150 536.2 419 64.4
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 3.1e-150 536.2 422 65.6
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 5.4e-150 535.4 378 68.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 9.2e-150 534.6 391 67.5
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.6e-149 533.9 372 69.9
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.6e-149 533.9 373 69.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 2.7e-149 533.1 385 68.3
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 2.7e-149 533.1 406 65.5
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 3.5e-149 532.7 434 63.4
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.7e-148 530.4 373 68.4
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 2.9e-148 529.6 374 69.5
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 5.0e-148 528.9 377 67.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 6.6e-148 528.5 384 66.4
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.1e-147 527.7 387 66.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.5e-147 527.3 375 68.8
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.9e-147 526.9 363 69.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.5e-147 526.6 375 68.8
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.5e-147 526.6 363 69.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.3e-147 525.8 369 69.1
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 7.3e-147 525.0 363 69.1
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.2e-146 524.2 364 69.5
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.2e-146 524.2 377 67.9
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.6e-146 523.9 399 67.4
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.6e-146 523.9 369 68.8
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.1e-146 523.5 413 62.7
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.6e-146 522.7 379 67.3
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 8.0e-146 521.5 416 64.4
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.4e-145 520.8 373 67.3
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 4.0e-145 519.2 359 70.2
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 5.2e-145 518.8 362 69.1
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 8.9e-145 518.1 377 66.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.0e-144 516.9 365 67.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.6e-144 516.5 381 66.7
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 2.6e-144 516.5 345 71.9
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 3.4e-144 516.2 429 62.5
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.9e-143 513.1 412 62.9
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.7e-143 512.7 373 68.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 8.3e-143 511.5 375 65.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.1e-142 511.1 415 62.9
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.4e-142 510.8 366 67.2
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.4e-142 510.8 413 65.1
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 7.0e-142 508.4 416 62.0
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 4.6e-141 505.8 431 61.0
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 6.0e-141 505.4 384 64.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 6.0e-141 505.4 367 68.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.7e-140 503.8 406 64.5
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 3.0e-140 503.1 434 59.7
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 3.9e-140 502.7 416 62.3
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 5.0e-140 502.3 358 67.3
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.9e-139 500.4 429 62.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.9e-139 500.4 377 65.8
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.9e-139 500.4 377 63.7
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.2e-138 497.7 374 65.2
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.0e-136 490.3 337 69.4
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 9.8e-136 488.0 434 59.2
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 6.4e-135 485.3 337 69.7
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 8.3e-135 485.0 361 67.3
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.5e-133 479.6 338 68.6
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.9e-131 473.8 369 62.9
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 9.5e-131 471.5 410 60.7
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.6e-130 469.5 375 63.2
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.3e-129 466.8 389 60.2
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 3.1e-129 466.5 373 63.8
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.0e-128 463.8 420 58.8
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 5.8e-128 462.2 385 60.8
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 2.4e-126 456.8 363 62.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.0e-124 451.4 374 58.8
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.7e-124 450.7 375 62.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.6e-122 444.1 477 51.2
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 4.7e-122 442.6 350 63.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 4.4e-120 436.0 327 67.6
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.1e-117 427.2 369 55.8
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.8e-111 406.4 347 57.6
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 7.3e-107 392.1 368 56.0
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.8e-103 379.8 430 49.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.2e-102 376.3 345 55.1
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.8e-100 370.9 357 52.1
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-97 360.1 330 53.3
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 5.1e-92 342.8 398 49.0
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.6e-91 339.3 373 51.2
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.1e-89 333.6 239 66.9
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 2.0e-88 330.9 239 66.9
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.9e-87 327.0 287 59.9
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.8e-74 283.1 333 47.1
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.5e-64 251.5 375 40.0
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.3e-58 229.6 336 42.6
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.2e-48 198.7 124 71.8
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 3.8e-47 193.7 130 71.5
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.6e-40 171.8 108 72.2
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.8e-39 167.2 133 60.9
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.6e-37 161.8 183 52.5
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.7e-24 117.9 124 49.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.2e-21 106.7 79 62.0
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 6.2e-21 106.7 191 38.2
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 3.1e-20 104.4 112 47.3
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.8e-19 100.1 99 53.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 8.3e-18 96.3 346 26.9
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.9e-17 95.1 73 64.4
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.3e-15 89.0 77 58.4
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.1e-14 85.9 97 48.5
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.1e-13 81.6 102 45.1
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.4e-12 79.0 224 29.9
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 8.9e-12 76.3 176 30.7
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 8.9e-12 76.3 57 59.6
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.0e-11 75.1 52 71.2
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 4.3e-06 57.4 34 70.6


User provided reference genes

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