Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.1e-55 218.8 111 100.0
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 6.4e-44 180.6 111 80.2
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 9.3e-43 176.8 111 80.2
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 3.1e-38 161.8 108 70.4
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 3.1e-38 161.8 108 70.4
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 5.3e-38 161.0 111 69.4
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 5.8e-37 157.5 112 69.6
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 1.3e-36 156.4 104 72.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.3e-36 156.4 109 70.6
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 2.2e-36 155.6 106 67.9
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.9e-36 155.2 111 69.4
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 2.9e-36 155.2 96 74.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 6.4e-36 154.1 97 74.2
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 6.4e-36 154.1 112 67.0
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.4e-36 154.1 112 68.8
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.1e-35 153.3 100 68.0
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.1e-35 153.3 107 67.3
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.1e-35 153.3 98 73.5
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.4e-35 152.9 113 66.4
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.9e-35 152.5 97 73.2
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 2.4e-35 152.1 96 69.8
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 3.2e-35 151.8 113 65.5
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 5.4e-35 151.0 110 66.4
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 5.4e-35 151.0 113 69.0
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 7.1e-35 150.6 113 67.3
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 9.3e-35 150.2 113 66.4
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 9.3e-35 150.2 113 66.4
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.2e-34 149.8 113 64.6
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.2e-34 149.8 110 65.5
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.6e-34 149.4 98 72.4
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.1e-34 149.1 105 68.6
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.7e-34 148.7 109 65.1
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.7e-34 148.7 111 71.2
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 2.7e-34 148.7 113 65.5
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 2.7e-34 148.7 102 66.7
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.7e-34 148.7 98 71.4
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 3.5e-34 148.3 113 66.4
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 3.5e-34 148.3 117 63.2
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 6.0e-34 147.5 98 70.4
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 6.0e-34 147.5 106 66.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 7.9e-34 147.1 115 67.8
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.0e-33 146.7 107 68.2
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 1.0e-33 146.7 113 65.5
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.0e-33 146.7 104 67.3
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.3e-33 146.4 113 68.1
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.3e-33 146.4 110 64.5
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.3e-33 146.4 113 66.4
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 1.8e-33 146.0 103 67.0
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.8e-33 146.0 107 71.0
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.3e-33 145.6 117 67.5
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 2.3e-33 145.6 98 66.3
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 2.3e-33 145.6 98 70.4
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 3.0e-33 145.2 113 64.6
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 3.0e-33 145.2 104 68.3
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 3.9e-33 144.8 98 68.4
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 5.1e-33 144.4 107 68.2
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 5.1e-33 144.4 112 65.2
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 6.7e-33 144.1 99 69.7
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 8.7e-33 143.7 103 68.0
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 8.7e-33 143.7 110 65.5
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.1e-32 143.3 98 67.3
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.1e-32 143.3 106 69.8
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.1e-32 143.3 110 63.6
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 1.9e-32 142.5 99 68.7
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.9e-32 142.5 98 66.3
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.9e-32 142.5 100 70.0
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.9e-32 142.5 97 72.2
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 2.5e-32 142.1 98 68.4
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 5.6e-32 141.0 117 63.2
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 7.4e-32 140.6 110 60.0
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 9.6e-32 140.2 117 65.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 9.6e-32 140.2 113 63.7
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.6e-31 139.4 107 67.3
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.6e-31 139.4 107 67.3
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.6e-31 139.4 107 67.3
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.6e-31 139.4 110 60.9
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 2.1e-31 139.0 112 64.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.8e-31 138.7 89 71.9
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 3.7e-31 138.3 112 61.6
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.4e-30 135.6 112 65.2
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 3.1e-30 135.2 109 61.5
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 4.0e-30 134.8 103 67.0
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.5e-29 132.9 94 64.9
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.6e-29 132.1 101 60.4
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.4e-29 131.7 102 60.8
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 4.5e-29 131.3 101 60.4
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 4.5e-29 131.3 101 60.4
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.8e-29 131.0 148 49.3
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 7.6e-29 130.6 114 57.0
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 9.9e-29 130.2 101 60.4
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 2.2e-28 129.0 101 59.4
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 2.9e-28 128.6 101 59.4
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 4.9e-28 127.9 101 58.4
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.4e-27 126.3 102 58.8
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 5.5e-27 124.4 101 58.4
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 7.1e-27 124.0 115 54.8
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 8.7e-25 117.1 104 54.8
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 7.4e-24 114.0 87 70.1
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 2.8e-23 112.1 87 63.2
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.8e-23 112.1 68 79.4
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 3.7e-23 111.7 74 67.6
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 3.7e-23 111.7 81 64.2
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.2e-21 106.7 73 74.0
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.5e-21 106.3 82 69.5
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 3.4e-21 105.1 68 69.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 4.5e-21 104.8 74 71.6
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 7.1e-19 97.4 112 45.5
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 6.0e-18 94.4 69 68.1
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 6.0e-18 94.4 95 48.4
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 7.9e-18 94.0 92 47.8
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 1.3e-17 93.2 84 60.7
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 5.7e-16 87.8 125 40.0
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 4.5e-13 78.2 62 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 7.6e-13 77.4 88 44.3
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 1.9e-11 72.8 44 81.8
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.6e-10 69.7 58 60.3
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.1e-10 69.3 101 43.6
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 4.6e-10 68.2 67 46.3


User provided reference genes

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