Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 0.0e+00 1441.8 759 100.0
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 7.7e-306 1053.5 768 73.0
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 8.9e-270 933.7 740 70.4
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 2.3e-265 919.1 776 64.0
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.7e-260 901.7 770 63.8
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 3.1e-254 882.1 710 64.5
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.4e-251 873.2 775 62.1
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 3.9e-249 865.1 792 59.6
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 9.2e-243 844.0 737 60.2
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 2.9e-236 822.4 767 57.6
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 6.4e-236 821.2 771 58.1
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 4.1e-235 818.5 776 59.1
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 9.2e-235 817.4 719 61.8
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.3e-233 812.8 711 64.1
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.6e-233 811.2 766 57.7
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 4.0e-230 802.0 694 62.4
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 9.3e-227 790.8 696 60.1
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 3.0e-225 785.8 770 58.1
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 3.0e-225 785.8 759 58.2
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 4.3e-224 781.9 543 69.8
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 8.1e-223 777.7 817 52.6
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 1.4e-222 776.9 788 53.7
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 4.0e-222 775.4 788 53.8
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 5.3e-222 775.0 711 60.9
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 6.9e-222 774.6 625 63.5
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.5e-221 773.5 732 57.2
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.3e-220 770.4 773 57.3
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.7e-220 770.0 771 56.2
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 6.4e-220 768.1 585 66.0
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 9.3e-219 764.2 773 57.8
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.1e-218 763.1 765 56.3
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 3.5e-218 762.3 706 59.2
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.0e-217 760.8 765 55.7
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.8e-217 760.0 759 58.8
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.8e-217 760.0 1071 45.1
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 3.0e-217 759.2 585 65.8
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 3.9e-217 758.8 585 65.3
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 5.1e-217 758.4 777 54.8
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 6.7e-217 758.1 727 58.7
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.1e-216 757.3 573 65.8
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 2.5e-216 756.1 584 64.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 7.4e-216 754.6 736 55.8
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 3.7e-215 752.3 635 60.8
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.2e-213 747.3 766 54.4
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.0e-213 746.5 748 55.5
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 2.6e-213 746.1 773 55.4
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 2.6e-213 746.1 578 64.5
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 5.8e-213 745.0 596 63.8
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.7e-212 743.4 746 55.4
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.7e-212 743.4 765 55.9
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 8.4e-212 741.1 753 55.1
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.9e-211 740.0 708 56.6
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 2.4e-211 739.6 588 62.9
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.2e-210 737.3 626 60.7
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 4.6e-210 735.3 775 53.7
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.3e-209 733.0 613 62.0
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 3.9e-209 732.3 758 53.2
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 1.9e-208 729.9 590 62.9
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.3e-208 728.8 577 62.9
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 2.1e-207 726.5 762 54.3
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 1.1e-206 724.2 633 60.0
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.8e-206 723.4 751 56.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.8e-206 723.4 699 55.1
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.5e-205 720.3 598 62.4
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.8e-199 699.5 783 53.9
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.1e-198 695.7 586 60.4
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 1.2e-197 694.1 822 51.5
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 3.4e-197 692.6 565 62.1
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.4e-195 687.2 586 60.1
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.7e-194 682.9 724 51.2
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.9e-192 676.8 703 54.2
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 2.2e-191 673.3 557 63.0
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 6.3e-191 671.8 623 57.0
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 5.3e-190 668.7 705 53.0
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 6.9e-190 668.3 575 59.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.0e-189 666.8 699 51.1
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 5.0e-188 662.1 889 47.4
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.1e-186 655.2 757 51.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.4e-185 654.1 739 50.5
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.5e-184 650.6 578 58.7
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 9.7e-184 647.9 694 51.3
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 2.9e-180 636.3 721 50.9
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.5e-180 635.2 649 53.2
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.0e-172 611.3 575 52.9
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.3e-172 610.9 635 53.1
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 3.2e-171 606.3 606 52.6
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 5.2e-169 599.0 706 47.7
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.4e-166 590.9 577 54.6
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.8e-164 582.8 795 44.7
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.1e-163 581.3 671 52.2
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 2.6e-160 570.1 527 55.6
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 7.0e-158 562.0 377 70.6
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.2e-157 561.2 704 44.5
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.1e-155 554.7 610 47.7
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 2.2e-151 540.4 767 45.5
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 3.9e-148 529.6 378 68.8
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 1.2e-141 508.1 594 51.7
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.2e-138 498.0 396 63.6
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 4.7e-138 496.1 702 45.4
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.8e-137 494.2 615 44.2
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.1e-126 456.4 667 44.5
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.7e-125 453.8 309 72.2
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 9.5e-123 445.3 350 63.1
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.6e-122 443.4 539 48.2
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.2e-118 429.9 318 66.7
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.3e-116 424.9 293 67.9
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.3e-115 419.9 328 60.7
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.2e-104 385.2 493 43.4
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 8.7e-100 369.0 512 41.8
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.3e-99 367.1 438 42.9
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 6.9e-97 359.4 482 43.4
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.0e-96 357.8 350 52.0
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 4.6e-93 346.7 454 50.0
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-87 328.2 556 43.2
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 8.2e-82 309.3 267 60.3
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.4e-81 307.8 560 34.5
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 8.5e-79 299.3 563 33.2
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 9.4e-70 269.2 207 65.2
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 6.1e-69 266.5 518 38.8
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.7e-66 257.3 156 78.8
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.4e-65 254.6 154 79.2
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 6.5e-63 246.5 318 46.5
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 2.2e-58 231.5 198 60.6
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 1.4e-57 228.8 283 44.9
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.1e-57 227.6 147 72.8
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.3e-57 226.9 138 79.0
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 5.0e-55 220.3 147 72.1
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.6e-53 215.3 195 57.4
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.8e-52 211.8 282 44.3
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.4e-49 201.4 228 46.9
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 2.1e-45 188.3 371 38.3
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 2.4e-41 174.9 295 39.7
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 1.3e-39 169.1 335 38.8
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.6e-37 162.2 178 52.8
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.0e-36 159.5 204 45.1
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.6e-35 154.8 118 66.9
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.7e-34 151.0 92 79.3
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.2e-32 146.0 84 83.3
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 1.2e-29 136.0 360 36.4
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 2.1e-29 135.2 83 74.7
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 2.8e-29 134.8 291 32.3
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.4e-25 121.7 85 64.7
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 7.0e-25 120.2 105 61.9
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.0e-23 116.3 134 49.3
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-22 112.8 70 80.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.5e-22 111.7 70 75.7
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.1e-21 106.7 91 56.0
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.2e-19 102.8 85 60.0
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.1e-17 96.3 93 57.0
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 3.5e-16 91.3 288 33.7
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.3e-15 88.6 77 54.5
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 8.9e-12 76.6 272 32.7
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.9e-10 70.9 55 61.8
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 1.0e-07 63.2 79 43.0
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 1.9e-06 58.9 104 35.6


User provided reference genes

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